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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2274450 |
| Transcript ID | Lj6g3v2274450.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Membralin [Medicago truncatula] gi|357445483|ref|XP_003593019.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | – | – | |
| Pfam | 7 | 463 | 457 | 9.40E-20 | ||
| PANTHER | 15 | 76 | 62 | 5.70E-182 | – | |
| PANTHER | 15 | 76 | 62 | 5.70E-182 | – | |
| TMHMM | 24 | 46 | 23 | – | – | |
| Phobius | 28 | 48 | 21 | – | – | |
| Phobius | 49 | 359 | 311 | – | – | |
| PANTHER | 141 | 531 | 391 | 5.70E-182 | – | |
| PANTHER | 141 | 531 | 391 | 5.70E-182 | – | |
| Phobius | 360 | 380 | 21 | – | – | |
| TMHMM | 361 | 380 | 20 | – | – | |
| Phobius | 381 | 406 | 26 | – | – | |
| Phobius | 407 | 430 | 24 | – | – | |
| TMHMM | 407 | 429 | 23 | – | – | |
| Phobius | 431 | 435 | 5 | – | – | |
| Phobius | 436 | 453 | 18 | – | – | |
| TMHMM | 439 | 458 | 20 | – | – | |
| Phobius | 454 | 464 | 11 | – | – | |
| TMHMM | 465 | 482 | 18 | – | – | |
| Phobius | 465 | 482 | 18 | – | – | |
| Phobius | 483 | 487 | 5 | – | – | |
| TMHMM | 486 | 508 | 23 | – | – | |
| Phobius | 488 | 508 | 21 | – | – | |
| Phobius | 509 | 670 | 162 | – | – | |
| PANTHER | 550 | 650 | 101 | 5.70E-182 | – | |
| PANTHER | 550 | 650 | 101 | 5.70E-182 | – | |
| MobiDBLite | 565 | 601 | 37 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj6g3v2274450.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2274450.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.