Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi0g1v0001100 |
| Transcript ID | LotjaGi0g1v0001100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | lysine ketoglutarate reductase trans-splicing-like protein, putative (DUF707); TAIR: AT4G18530.1 lysine ketoglutarate reductase trans-splicing-like protein, putative (DUF707); Swiss-Prot: sp|Q83883|POLG_NVN68 Genome polyprotein; TrEMBL-Plants: tr|V7BVI9|V7BVI9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi0g1v0001100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr0:1631182..1639099) extracted from Lotus japonicus Gifu genome v1.2.
GGCTTGGCTTGGCTTGACTTGATTGTATTTGTTTTGTTTGGAAGCGTTGAAGGAAGGAAGTCCCTGTCCCTCCCTCCCAT CCCACTCCTACCTTTCTTCTCTCTTTCTTTCTTCAACCAACTTACTTTCTCTTGATTCCTCTTTCACACAATAAATTTGT CTTTTTTCTTCTTATGAACTTCACTTTCTGCTTTCGCTTCCTTCCAAAATGAAGGCTTTCAATTCTGTAACTGTAAGCTC CTTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTCTCTTCTCTTTTCTTCTGTT TGGAGTGGGTAATGGGATTCATTTCATGCCACCACCAAAGCAAAGGAATCATTTTTTTTACACCTTTTCATGAATTCAAC TTGATATAATTTGAGTACACGCCAACTTGATACAACCATTGTTTCTGTCAGGGTTTTGTCTTGCCAGACTTGAAGAATAG GTTCTTCCTTTGGAGTTTCCTCATTGTGGTTTCTTTAATTTGTGGTGCTTATGTGGTTGGTAATGCATCCTTTGCAAAGG AATACAAACAAGTATGTATTTCTGTCCCAAAGTTTCAATTTAAATTGCAAGATGCAAAATTAACAAATTTATGGAAATTT TATTCTCATGTTTGTAATTCGATGGTTACTTCTGTTCTAGGAACAATATAATAGAAACATTAGTTTTGCACTAGATATGT CTCTTTGAAAATGTATACTGTGACAACTGTATATTTGCCAGAATATTTTCTACTTAATTCTGTAAATGTTGCTCACTTTC ACACTTTACAACTATAACGGCGAACACTGCTTTTAAGTGGTTGGTATCTGTTCATTGAGGCACCAACATGAAGTTAGAAA CTTGGGCAATCATACCTACATTTTATTCTTATTAGAAGAAAAGTTCAATTCTATGGGTCTCACCTAACCTTTCCCTGGAC CTGCCATGGATGGAGCTTTTTTGCACTAGGTTGTCAGATTTTTATCTTCTTTGAATTTGTGCATAGTTCTAAAGACATGA TAGACATTAGAATGCGATAGCAGATATTGGCATATATGTTTGTTTGGGGTTCTAGCTCAAGGTTGGACTTACACTATGTT TGCATATTTGTATCTTTTGAGGGAACAAATGGTTTTCAGTTTTATTTTTTGCTTTGAAGGTTTTACCTTAATTTTGAATT TTGATGATCAATATTTAATTAATCTCATGTTTCTCTGTAATTTTTTATGAATCATTTAGTTTGAAATTGGACATTTGATT GATTGAAAATACTTTTGGGCAATATATCCGCAGAGATTAGCACGATGGGGACTAATTTATTCACTGCCAGTTACAAAATC CAATGCATGCAAGGTTTGTTATGCCTGGGGAAAGAAATCCATTTTACAAACTTGTAACTGCTTGGAATTACCTCGAATAA TTACCTTCCTGTTTCCATTTCCATAGAAACATTGCTGGCCTTCTGGAACTGAAGCATTGCCTAAAGGAATTGTTGCTAGA ACATCTAGCTTCGAAATGCGGCCCTTATGGGACTCTGGTATAAATCATGTATGTGAATGTGTGCTAAATTCTTATATTGA CTTATCGTATTGAAATTCACTTAATACTCTAATAGTATTAGTATTAAGCATCACTTAATAAAATGGTTAACCAATTCTTT AATTCTGTCCACCTTTGAAGTAATTTTTTTTAGTTAAAGTTGGTTAATTAAGGTTGAATCTTGAACCAGTAAACTGATGT AGATTTAGTATTTCAACTTTATATACTATAAGATTTGGTACATGAACATGTTTGAGTATTGTTAAATAACTTCATAAGTT GATTTTTTCATTTAAAATTTGATTTGGGTTACATTGAGTAAATGATAGCAAAAGCTGGTAGTTCATATGTTTTTGTGTCC ACTTGTTGGCATTTGCTTATCTTCAAGAATTGCACTTTCAACCGTGAACATTGCACTTTTTTATTATATCATATTTAGTT ATTTTTAAATAATGCATGTTCCTATTCTGGGAGGGTGGGAATGGCCTCAATGGTGAGCTCACTGAAAGAAATAATGACTT GTACAGCTGCAACGTGGATATTATATTTGTTTTGTAAATCAGATGCTGTAAATTGGAAGATTATGCAGTTGAAGGGTAAC AATGACTTCGTACATAAATTAGAATATTTTGTTGTCTTACTTGTTAGTGTTTTGATTTTCTTATTACTTTTAATTCTTTT TTTGTCTATAAGAGCATATGTAGCGCCATGAAATCAAAACAACTGGCACTTTTGGGTACATGAATAATCAAAACAACTTC TTCTGAAAAAACAAGCGGGTGTATATTACTAATCCCCTATAGGTGGTATGCTAATGCATTCTTACTTGTTTTTCCAGACG GAGTAAGTTAGCAACTTACACCTTCCGGTGGTGTATATTAACAAATTTCATTTTGTAACTTACTCAATTCTTCCTTTAAA ACAAGTAGGACTATGCTAGCAAGCCCCCCCCCCCCCCCCCCCCCATGTATGTATGTTAAAATCCTGCTTAAGTCATTGGT TGTCATTAATCTTCTTTCTGTTCTTACTTTACTTTTTCAATTGTTTTTATTTCAGAGAATTTCAAAGCACCCATTGAACT TGTTGGCTATTGCAGTGGGGATAAAGCAGAAAGAAATTGTCAATAAAATAGTTGAAAAGGTGAGTTTTGCTTCACTTATA TAATTTGATTTTGGTCCAAAGCTCACTATATTTGCTGACTCATATCTGCAGTTCCCATCAAGTGATTTTGTGGTAATGCT TTTTCATTATGATGGTTTTGTGGATGGATGGAAGAACTTAGCTTGGAGTAAGCACGCCATACATGTGTCTGCTATCAATC AAACAAAATGGTACAATTAGCTCATGTGATTTCCCCCCTAATTATTATAACTTATAATCTACTCTGAAGATTAAATTCAT GTATGATTATTAAGAAAATGATGATATATGATGCCTTAGGTGGTTTGCAAAACGGTTTTTGCATCCAGACATAGTTGCTG ACTACAATTATATATTTCTCTGGGACGAGGACCTTCTTATTGATAATTTTGACCCAAAAAGGTAAGCAACTTATCATATC ACACACAAAAAAAAAATCTATTCTGTAGATGTACACTTACAAAACAAACAACTCGTACTCTTTTTTATCTGAATTTTCTA CATATAATATTACAATAGTGCTGGTATATTTAATAAATTGAATTTCTTTGTTGACCTATTTGTTTATTTGATAGATTATT TTTACTTGACTATATTAGATATATATATGAAGTGGCAATTTTTTTTCCTAACATTGATTATTTTATGCTTGATGTATTGA CTTGTTGCTTATCTGGTGTAGGTATGTATCCATTGTTAAAGAAGAGGGACTAGAGATATCACAGCCTGCATTGGATCCTG TTAAATCAGAAGTACATCATCCACTGACTGTTCGTAAAGCAGGATCAAAAGTGCACAGGTTAACCTTATTTCCACCTCCT TGTTGCTTCAGATATGGTTCTATTGGTAGATCATAACCAACACAGTGCTCTGTCAATGATCATTTCTGTCACACTTGCGT CCTTGTGCTACATGCTGCAGTGGATTTTTATAAGTATTCCCCCCCCCCCCAAAAAAAAAACAATTGCTAATATCTCTTCA GGTATTATGTTATCTCTGTACAGAAGGTATTATAAGTTTAAAGGTGGTGGAAGGTGTGATGACAATAGTACTGCCCCTCC TTGCACAGGGTAAACAGTTTCATCCTCTATCCTGTGTTATTTTCTCTTACCTCCATTTTCCAACTCATTCTGATCATCTG TGCTATTAAATAGAATTTGGAATTTAATATGGAAAGAGATTGTTTGCAGTTGGGTGGAAATGATGGCGCCAGTGTTTTCC AGAAAATCATGGCAATGTGTATGGCATTTGATCCAGGTTTGGATAAGAAAAACCTTGTAAACTTGTAACTTTTAACCATA TTGTGCAAATTAGTACAGAAGAGAGAAAGAGAGAGAGAAAGGTAGAATAAGAGAGAACTCAGGGAAACAGAAGTTTTATT ATGAATCAATCTGAATGTAACTAACTTACTACAGAACTATAAAACAGACTTATTCTGTTATGATAGCCCACTAACTGTAC AAATGAAACCCAAATGCACCTTACATCACATTACATGTGCATCATATCCCCCCTCTTAAAATCTTCCTTGTCTTCAAGGA GATGCACAAGTATCAAAATTGGGAAATTGCTGTTTCAAGTTATACAAGATCTCCTATGTTGCTTCTTCCTTGAGCTCCAC CTTCCATTGTACCAAAAATCCAGTCACTGCACGATGTCGCCGCTGAACCATACGCCTTTCTAGTGTCTTAAATGGAAATT TAGGACTATCCAAGCTGCCCCATTCCATAGGCAAAGCACACTGCTGAATGTCGTGATCTCGGCAAGGTTTGAGTAAGGAA ACAAGAAAAGTAGGACGAATCTTAGGTTCAGGTGGCAACCTCAATGTATAAGAACTTCTCCCACACAATGGAGAATCTGA TAGGGACCAAAATACCGAGGACAGGTGATAGGGACCAAAATACCGAGGACAGTTTTTCTGACTCTATGTTGTGCTGTTTG TTGTCTATAAGGCTGAAGCTTAAGGAACACCCAATCTCTTTCCTTAAACACCCTCTCAGATCTGTTTTTATCAGCCATTC GCTTCACACGTTGTTGAGCCTTCTCCAAATTGCCTTTGAACTTATTGAACATAACCTCCCCAGCTACAAAGGTCCTATCC ACAGCCTCAACCAATGTACTATGAGGGCCATAAGGGAGATGCAAAGGTGGAGGTTGTTCATACAGAACCTCAAAACGGAG TAGCTTGTATGTCCGAATGGAATGTCGTATTGTACCACTATTCTGCCTATGGTAACCACTGGGGCCACTCCTTAGGGCGT TGGCAAGTCATAGCACGCAAGTAATGCTCCAAACAACGATTTAACACCACTTTTCCCATCTGATTGCAGGTGATAAGCTG TAGAAAGGCTGAGTCACCCCCAATTGTTGCAGAAATGATGACCAAAATTTGTTAGTGAAGAGTGGGTCCCTATCACTCAC AATATTAGTGGGTGCCCCATGTAGCCTATAGATGTCCCTAATAAAGATTTCTGCCAAGTTAGATGCAGTAAAAGGATGGG CTAGAGGAATGAAATGAGCATATTTGCTCAACCTATTAATAATCACCCAAATGGTGTCTTTCTTATAAGACTCAGACAGC TTCTCAATAAAATCCACGGAGATGCTCTGCCAAACTCCAGCAGGTATAGGACCAGGCTGCAGAAGTACAGGTTCATACTT ACACCTCAATCAAGTCCTACACCTTTGAATGAACTTAGCAACATCCTTTCTCAGCCCCTTCCAAAGAAACACAGACTTTA TTCTATGCACAGAAGCTCTAAGCCTCTAACCCTAGAGTGTCCAGCCTGATGAGAAGAGTGCAACCACTGTGATATTAAAT CCCTGACATGAAGATCATTAGAAACCACAAGGCTATATTTCCTAAACAAAAACCCATCAACTACCTTGTAATGAATGTGT AAATCTGGTCTGTCAGTTATTTGCTCCTTCAGTTGTTGTAATTGTGGGTCAGAGGCATATGCTGCCAGAATAAGATCCCA CAATTTTGTAGAGATAGCAGAAACTAACAACTGCAGTAGCTCTCCATGAGAAGCTCTGGACAGAGAATCAGCTGCCACAT TCTCTTGAGTCTTGACCCTTCTTGTGTTTAATCTCATAAGTTTGGTCACTCACCTATATTGAGCAGCAGTAGATAGCCTT TGTTCAAGCAAATTCTTAAGGCTTTGCTGATCAGTCAAGATCACAAATTGTTGAATTGACAAATATTGATGTCATTTTAT TATCAATCAATATTGTAACTAACTCAGTACAGAACTATATAACAGACTTATTCTGTTAAGACAACCCAATAACTGTACAA ATGAAACCCAACCATGCATCTTACATCACATTACATGTGCATCATGATTCCTGAGATTGTGATTTTGACGTTTGATATTT CTCTCAGCTTATCAAAAGGAAAGTAATTACACAATTACAGAGAAGATCGTATATTACTACTATGTTAATAGGGGAGGTGG GAATGTGGTGTGGGATGCAATTTTAGATTTATGATTGGCTAGCTGCTTCTTCTTCTGTTTCTTGTTATTTAAAAAATAAA TTTTTAAATTGCTTCTCATTTATTTTAATGTGTTAAGAGTTACATTTTGAAATAATCTTTTGCAATAGATTAGAGAAAAG CTAAAATGTTCTTTTTCTAATTGTGGTAAAATGTAAAATAGTGGTTGGTTTATATAAAATTTCTAAAAAATAAATTATTG TTTTACTCAATTTTAAAATAACTTAAAGAAAAAAACAAATGGGCTTGTTCAATCTTTCAGTTGTGTTGTGCATGGTTTCT TCTTATATAGTCATGTTAATCTAATCATCTTTTTGTCTACAGAATGACTTAATCCATGCGTGGGGCCTCGATAGGCAGCT TGGTTATTGTGCACTGGTAAGTTGCTTGCACCACAACAGCACATTCATTTCATACTAGATCCTTCCATTGTGGTTCTCAT TCATCTTTCAACAATATTTCAGGGCAATCGAATGAAAAATGTTGGTGTGGTGGATTCTGAGTATATAGTTCATCTGGGTC TGCCTACTCTTGGGAGCTCTAATGACAATGAGGCAAGTAATTTCACATTTGTACGTAGAACAATCACATTTTTACCTTGT TTAAATGGCACTTGCTGCATACTAAATGGAACATATTAGATTCAGGGAAACACTTGTTATGAAAACACAAATTCATTTGA TTGGTTCACCTTTCCTAAAAATTAGCAACTTGACTTTGTATTTTTTTCAAACAACCAATTATACAAAGCCAGATAAGCCT TCTTGCGTACTGTTAAAAAAGTTCTCGTTATATGTAGCACTTCTGTTAAATTCACGCAGATTTTTCAATAAACTTCACCT TCTTAAGGAGATTTGTTAGCTGTTAATAATTTCTTTTAGTTCAAGACTTCCAGTTTCAGAACAACTTCAATGTTTGAATT AAATCTCATTTGTGTGCTCATGCTAAATTGACAATCTAAATTATTGCTAAGAAATTGTCCTCTGTGTTGCAGACGCTGTC AGATTCCCACAAAGATAATTCCAGAGTTAAAGTAAGTATGTTTGTGAGTGATAGGATAATGTAGATTTGATTTATACAGC TTTAGCTCATATAATATAACAAAGTAATTCAATTGACTGCATGCAGGTTAGGATGCAGTCATACATTGAAATGCAGGTTT TTGGGAAAAGATGGAAAGAAGCAGCAAACAAGGACAAATGTTGGAGTGATCCGTATGGACAAGTGGCAAACCAGACTAGC CATTATTGAGTGTATTTTGTGAGGTTTCCAGGTTCGTAGTCAACAAATTGACTCGAGCAACATAGTATAATATCAAGTTC TGGTGAACAGAACGTATGATTGGTCTCCAGTCTTCTTTTCTGCCTTTGATTTGATATCTCAACAGGAGTTTATAGGATCA TTGTCGTTTGCCATTATTGGAGGATATTTTGTACCTTCATTTTGTGATTGAGTCATTTCTTCCCTTAGGTGCAGGTGTTG GTGTACACAGAGTGGTGCGGAGCTGTTCATATGACGACAGAAAAATGTTTAGATTTTTATATTATACCCTTTGAAGGTCA CTGTAAATAAGTTAAGTTACATTACATATATACATGGCTCAACAGTCTCAAATGCTATTCTTCGGATGACTAAATATATG CTCGATACATCTTATATTATTGTTGGTATATCTTGCTACTTTCAAATTCTACTTTTTAATTCGATTGAGTTTGTCGTC
CDS sequence (LotjaGi0g1v0001100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGCTTTCAATTCTGTAACTGGTTTTGTCTTGCCAGACTTGAAGAATAGGTTCTTCCTTTGGAGTTTCCTCATTGT GGTTTCTTTAATTTGTGGTGCTTATGTGGTTGGTAATGCATCCTTTGCAAAGGAATACAAACAAAGATTAGCACGATGGG GACTAATTTATTCACTGCCAGTTACAAAATCCAATGCATGCAAGAAACATTGCTGGCCTTCTGGAACTGAAGCATTGCCT AAAGGAATTGTTGCTAGAACATCTAGCTTCGAAATGCGGCCCTTATGGGACTCTGGTATAAATCATAGAATTTCAAAGCA CCCATTGAACTTGTTGGCTATTGCAGTGGGGATAAAGCAGAAAGAAATTGTCAATAAAATAGTTGAAAAGTTCCCATCAA GTGATTTTGTGGTAATGCTTTTTCATTATGATGGTTTTGTGGATGGATGGAAGAACTTAGCTTGGAGTAAGCACGCCATA CATGTGTCTGCTATCAATCAAACAAAATGGTGGTTTGCAAAACGGTTTTTGCATCCAGACATAGTTGCTGACTACAATTA TATATTTCTCTGGGACGAGGACCTTCTTATTGATAATTTTGACCCAAAAAGGTATGTATCCATTGTTAAAGAAGAGGGAC TAGAGATATCACAGCCTGCATTGGATCCTGTTAAATCAGAAGTACATCATCCACTGACTGTTCGTAAAGCAGGATCAAAA GTGCACAGAAGGTATTATAAGTTTAAAGGTGGTGGAAGGTGTGATGACAATAGTACTGCCCCTCCTTGCACAGGTTGGGT GGAAATGATGGCGCCAGTGTTTTCCAGAAAATCATGGCAATGTGTATGGCATTTGATCCAGAATGACTTAATCCATGCGT GGGGCCTCGATAGGCAGCTTGGTTATTGTGCACTGGGCAATCGAATGAAAAATGTTGGTGTGGTGGATTCTGAGTATATA GTTCATCTGGGTCTGCCTACTCTTGGGAGCTCTAATGACAATGAGACGCTGTCAGATTCCCACAAAGATAATTCCAGAGT TAAAGTTAGGATGCAGTCATACATTGAAATGCAGGTTTTTGGGAAAAGATGGAAAGAAGCAGCAAACAAGGACAAATGTT GGAGTGATCCGTATGGACAAGTGGCAAACCAGACTAGCCATTATTGA
Protein sequence (LotjaGi0g1v0001100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKAFNSVTGFVLPDLKNRFFLWSFLIVVSLICGAYVVGNASFAKEYKQRLARWGLIYSLPVTKSNACKKHCWPSGTEALP KGIVARTSSFEMRPLWDSGINHRISKHPLNLLAIAVGIKQKEIVNKIVEKFPSSDFVVMLFHYDGFVDGWKNLAWSKHAI HVSAINQTKWWFAKRFLHPDIVADYNYIFLWDEDLLIDNFDPKRYVSIVKEEGLEISQPALDPVKSEVHHPLTVRKAGSK VHRRYYKFKGGGRCDDNSTAPPCTGWVEMMAPVFSRKSWQCVWHLIQNDLIHAWGLDRQLGYCALGNRMKNVGVVDSEYI VHLGLPTLGSSNDNETLSDSHKDNSRVKVRMQSYIEMQVFGKRWKEAANKDKCWSDPYGQVANQTSHY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 11 | 382 | 372 | 1.2E-182 | – | |
| PANTHER | 11 | 382 | 372 | 1.2E-182 | ||
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 20 | 42 | 23 | - | – | |
| Phobius | 43 | 388 | 346 | - | – | |
| Pfam | 71 | 369 | 299 | 1.9E-142 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi0g1v0001100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…