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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0001600 |
| Transcript ID | LotjaGi1g1v0001600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; TAIR: AT4G38370.1 Phosphoglycerate mutase family protein; Swiss-Prot: sp|P50201|MAS12_AGRRH Agropine synthesis reductase; TrEMBL-Plants: tr|A0A0B2SRK5|A0A0B2SRK5_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0001600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:547814..551324) extracted from Lotus japonicus Gifu genome v1.2.
CCCCAAATTAATTAATTAAAATTAAACTTATTAAAAAAGCTACTTGATTACATATCTAAATTCAGCCAATTAACTTGACA TCAGACCAAAAAATACCACAACAGAGGCAAAACCCCCAAATAAAGGAACCCTAAATCTCAATTCATCCAATTTCAAATAG CACAGAAACCACAAAGCTACGTTTAATCATAATTGCCATCATTCAAACATTGATTTGGAATTAAGAACAAAAACACAAAC TCTTCCAAGTAGAACAAGAAACAATGGCTTGATGATGGTGATTTGGGGTTCACCCTTGCTGGATCTGGACAAAAAAGGTT TTCTTTGCTCATCCTTTTCCTTGTTCTTCATCTTGTTGGAACTTGGATGAACAATGGGAGAGAAAAGTTATTATCTTTCT CAGATTTGGGATGAGAACGTGAGCAAGTAGAAGAGACGTGATGGTTTTTTTTTTTTGGGTTTTTTTTTGGATTGGGTGAG AGAGGGATTAAGGAGGAAGATGAGGAAGAAGTTGAAGAACAAAGTGGGAATTGAGTTTCTGAGTTTTTGGGTTTCTAGGT AGGATGAGGTTGAAGGGGGGAGAAATCGATGGTGGGGTTCTGACTCAGAATCTCAACACCAACGCTTCCTGTGAAATACC CCAAGTTTCTGTGTCACCACAAGAACCAAAAAATAGTGCAGAGAAAGCAGAGCACCAAAACACGAACATGGTAAGTAAAG GTGAAGGAAGATGACACTGCTTTTGAGTTAGCACAGTAAAAATATTTGAGCTTTGTAATTTGTTCATGCATGAGATGAAA AATGAAATCCTTGTAGAAAAAGGGTAGTTTGAATAGTTGAAATTTGAAGTGAGTTACCTGGTACAGAACTTCTGGGCTTT GAGTTTGAAGATGGATGAAATATTGATGAAGATTAATAAGGTTAGGTTTAATTAACTAATTTGGGGTAATTTAGGTTACT AATTTAATTTAATTTTCTGATTTTTAATTTATTTTTAATTTTTAATTTATATTTAATTTATTTTAAAAATCAACATAAGC AAATTTAATACATTCAGCGTGACACTTCATCCCTCGCCGGAGCTCCGGACTCCGGCGAGGACTTGCTCCAAACGATTTAT AAAGAAAAGGAGCTTTTCCACAAATTTTTCTGATCAGGGACCTGGTTCAGACGGCGAGACAAAAACAAGGACTAATTTGA GGATTAAGCCATCTGTTTATTACAGAATAGAGATAGTAGTGAAAATCAAATCAAATGAAACAATGTGTGTGGTAACGAAG AACAGATACTGGGTTCTGAGGCATGGCAAGAGTATTCCCAACGAGCGAGGACTCATTGTTTCCTCCATGGTTAGGTTTCG TTTTATTTCGTTTCTTGTTTTATGCAAACCAATCTTATCATTTGTGATTATTAATTGGTTAAATAAATGGATTGAAATCA CAGGAAAATGGCATACGCCCTGAATTCCAATTGGCCACCGACGGTGTTAGTCAAGCACAACTCGCTGCCAAATTATTCCA CAAGGTATGTATGTTGTATATTTATTTATGAATTGCAGAAAAATCAAAGTAAAACTGAAGTGAACCAAAGACCATGAGAT TTGATGTTGAAAATGGATCATGCAATCACTCAACCTAAGAACTCCACTCCCATGTCCCAAATTTCAATTAATTATACCAC ATCATCTTCTCTATATGCAATGCATTATAGAATACCAACTAGTCTTAAGGCTTAACTAACAGTACGTGTTCTGGACAGGA ACTAGAGGCTAATGATGTACCACTTGCTAATGTACGCATTTGCTACTCCCCATTTTCAAGAACCACCCACACAGCAAAGA TTGTTGCAACTGTCTTGAATCTTCCTTTTGAAGGCCCCCAATGTAAGGTCAGTGAGAGCCTTTCAAATTCAACCAACCAA TTTGTTACTTTGGTTGCCATTTGCCCTGTATAATGCAGCACGAGAAATACCCCAAACCTCTCTGCTCATCCTTAACTACC ACTTCACCACTTGCTTATTCATGTGCTTTTGCCCTCAAAGTTCATGATTTTTTATTGATGAATATCATGTATCTTTTTTC CTGTTAGGTCATCGAAGATCTTCGAGAACGCTTCTTTGGTCCTTCTTTTGAACTTCTGTCGCATGATAAAGTAAGTGATG GTCAATGAAACTTTGTCCATCCGTGTTGCACTTCACCATTTAATTCTTTGCATTATATGTGGTTGTAGAAGAAATATTGT GACTATTTCAAGGCCATTCGGCGTCACTATTTAGATATTGTGTGCATTAGATATGCTAAAACCTTTTCTGTAACATTGAT TTTCTCTTTTCATTCATCAACAGTATGAGCAAATTTGGGAACTAGATGAAAAAGATCCACTTGTTGGGCCAGAAGGAGGG GAAAGTGTTAAGGATGTTGCCTGTAGACTTGCAAGAGCAATGGCTGTTATGGAATCGGAATTTGAAGGGTAGTGATTTTT GTCTTAAATATCATTTAAAATCTTGTAGCGTTATTGTTTCTTCTAGCACAAATCTGTGAAGCAAATCTATTATGGGTTTG TAGCTAGTGCAAACTGCCACAAGGGAGACTTCGATAAATGCATTCAAAATTTAGAAAAAGTTTTTTTTTTGATTCTGACT TGTCTATGAAGCAGGTATTTGATCTAAGGTTACAAAATATCATTCAACATCGAAATGTTCTTATTTCTTAAAGCATGTTT GGGTCTTTTTGTTCATATTCTATCAACTAAATCAATTCTGTTCCACATTCTGCAGATGTGCAGTTTTGGTTGTTAGCCAT GGGGATACCCTACAAATCTTGCAAACAATTCTGCATGCAGCTAATCAACACAAGGAACCCGCTTATGATGACTTAGCATC AATACTAAATGCAGTTCAGGTGGCACCAGTCTTGTCACAACACCGCAAATATGCTTTGCTTACCGGAGAGCTTAGGGGAG TCCTTTGAGATTTTGACTATTTGAGGCCTAGCAGAAAGGCAACTGTTTTTTGTTGGAATTGGATCCCCTATTGTTGCTAA ACTATTAAACCGGGTTAATTGTTAAATTAGTCCCTGATTTTGTAAGCGAGTTTGGTTTTAGTCTCTCGGCAAGAAAATGA CATTTAGTGGCAATAATTTATGAATTACTGGCTGTTTTTTACCGCCACTAAACGTCACTTTTCTGCAAATGACTAAAATC AAACTTTCTTACAAAATCAGAGACTAATTTGATCATTAACCCTATTAAAGCAACATGTGTGCATGTCTAAGATTTTGAGC AGGCCTCGTACAAAAAATCACGTGAGAGAACTTTCTGATTACATTTGAACATACTAAACAGCCTGCAAATTTTTTGGAAT GGGGATGTAAATCCATTTTGGTTGCTCCCGTTCAATTTATCGGTTTATTATCATATCCAAAACTTCAAAAGTAATTTTCT TATGGAGATAATGATCCTCTTTCTGTGGAAAAATTGCAGTTTGACAATGATTATATGTTGGATCTTTTTTT
CDS sequence (LotjaGi1g1v0001600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGTGTGGTAACGAAGAACAGATACTGGGTTCTGAGGCATGGCAAGAGTATTCCCAACGAGCGAGGACTCATTGTTTC CTCCATGGAAAATGGCATACGCCCTGAATTCCAATTGGCCACCGACGGTGTTAGTCAAGCACAACTCGCTGCCAAATTAT TCCACAAGGAACTAGAGGCTAATGATGTACCACTTGCTAATGTACGCATTTGCTACTCCCCATTTTCAAGAACCACCCAC ACAGCAAAGATTGTTGCAACTGTCTTGAATCTTCCTTTTGAAGGCCCCCAATGTAAGGTCATCGAAGATCTTCGAGAACG CTTCTTTGGTCCTTCTTTTGAACTTCTGTCGCATGATAAATATGAGCAAATTTGGGAACTAGATGAAAAAGATCCACTTG TTGGGCCAGAAGGAGGGGAAAGTGTTAAGGATGTTGCCTGTAGACTTGCAAGAGCAATGGCTGTTATGGAATCGGAATTT GAAGGATGTGCAGTTTTGGTTGTTAGCCATGGGGATACCCTACAAATCTTGCAAACAATTCTGCATGCAGCTAATCAACA CAAGGAACCCGCTTATGATGACTTAGCATCAATACTAAATGCAGTTCAGGTGGCACCAGTCTTGTCACAACACCGCAAAT ATGCTTTGCTTACCGGAGAGCTTAGGGGAGTCCTTTGA
Protein sequence (LotjaGi1g1v0001600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCVVTKNRYWVLRHGKSIPNERGLIVSSMENGIRPEFQLATDGVSQAQLAAKLFHKELEANDVPLANVRICYSPFSRTTH TAKIVATVLNLPFEGPQCKVIEDLRERFFGPSFELLSHDKYEQIWELDEKDPLVGPEGGESVKDVACRLARAMAVMESEF EGCAVLVVSHGDTLQILQTILHAANQHKEPAYDDLASILNAVQVAPVLSQHRKYALLTGELRGVL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 4 | 217 | 214 | 3.0E-27 | ||
| PANTHER | 5 | 224 | 220 | 1.0E-94 | – | |
| SMART | 8 | 177 | 170 | 0.0033 | ||
| CDD | 8 | 181 | 174 | 1.24036E-11 | ||
| SUPERFAMILY | 9 | 184 | 176 | 1.61E-23 | ||
| Pfam | 10 | 182 | 173 | 1.1E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0001600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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