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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0010100 |
| Transcript ID | LotjaGi1g1v0010100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein DnaJ; TAIR: AT2G05230.1 DNAJ heat shock N-terminal domain-containing protein; Swiss-Prot: sp|Q8TQR1|DNAJ_METAC Chaperone protein DnaJ; TrEMBL-Plants: tr|I1M6B1|I1M6B1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0010100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:1264039..1266150) extracted from Lotus japonicus Gifu genome v1.2.
GTTCAAGCAAACAAAGAGGAAGCACTTCAAGCATTAGAGATTGCTGAGAGGAGATTTGCTCAGAGAGACTTTGCAGGTGC GAAAAGCTATGCTGTGAAGGCTAAAACGCTTTGTCCTGAAGTGGAAGGTATATCTCAAATGGTGGCCACATTTGAGGTTT ACATTGCTTCTGAGATCAAACATAATGGTGAGCTAGATTATTATGCGATTCTTGGATTAAAACCTTCTGCTGATAAAGAG GCTGTTAAGAGAAGTTACAAGAAGATGGCAGTATTGCTTCATCCTGATAAGAACAAATGCGTGGGAGCTGATGGGGCGTT TAAACTTATTTCTGAGGCATGGACTTGGCTTTCAGATAGTGCTATGCGTAGTTCTTACGATCTCAAGAGAAACTCACAGT CAGGTGGGATTAGTCACTCAAAATTTTCTTCTGTCCATGCCACTGGGGCTACAGTTTATAACAAAAAATGTTCCAATTTG TCAACCTCTCGAGGTGGGCTCGACACCTTTTGGACAATCTGCACCTCCTGTAAGGTTCAGTATGAGTATCTGCGAAAGTA TGTGAATAAGAAACTCTCTTGTAAGAACTGCCGTGGCACTTTTGTTGCTGTTGAAACCGGGGCAGCCCCAGCAAATGGTT CATTTCCATATTCTCCTTGGTCACATGTGCCAGGAAATGGGTATGGAAGTCATTCATTTGATGGGGTTACATATGTTCCA ACTAATGCCACCTATTTCAATGGGAATGGGGTCACCGGATACCATTCTGGACATGGATATGAGTATGCTGCAAATGTTTC ATTTCAGTGGGGTTCTACTGGACTCATCCATCAAAATGGATCAACTACGTTACCTGCTGATTCTGTTTATCAGGCCAATG GAAATGCGAAGAGGGGAAGACCAAAACTCAAATCAGGAGCTGATGGAAGGAATCACGTCACAGAGACTGTGGTCAACACA AATCCCGATGCATCATTCTCCTGTAATGAACCACAGGAAGTTAAACCAAGTAGACCTGACAAGAAACGGAAAGTTGTGGG AGCCAATTGCAGAAATGGCTATGAAGAAAAAGGGTCTCAAGGTGCTTCAGAGGCAATAGTGTCTAATGGAAATAATAGCG TCGGACTTAGCCAGAAGCTTTCCTGCACAAATGACATTCATACCAAGCAGTTCTCCATGGCACCGGCATTTGACGCGAGA AAGTTATTGATTGAGAAGGCCAGGACTGAAATTAGGAAGAAATTGGAAGAGATGAAGTTGTCATCTGAAGCTGCAACACT AAAAGAGAGAGAAAAAGCTCAAGCTGAAGTTGGTCAAGTCAAAAGAGAGACGTGTAGAAGAGCAGTTCTGAGTGTTCCTG GTCTTGAATTAGAGCACAGTAAAGCTGGTCCAATCTCAATAACTGTCCCAGATTCTGACTTTCATGACTTCGATAAAGAT CGGGCGGAGGAATGCTTCAGGCCAAAGCAAATATGGGCCTTGTATGATGAGGAGGATGGCATGCCACGATTATATTGTCT GATCCGTGAGGTTATATCTGTTAATCCATTTAAGATTCATATCAGTTACTTGAGTTCCAAAACTGATAGTGAGTTTGGCT CAGTAAAGTGGCTTGATTCAGGTTTTACTAAATCCTGTGGAAATTTCAGGGCTTGGAATCCTGATGTTGTTGACCAAGTT AACATATTTTCTCATGTTCTAAGTAAGGAGAAGGCTGGTCGAGGTGGCTGCGTTCGCATATACCCCAGAAGTGGTGATAT TTGGGCTGTTTATCGAAATTGGTCACCGGATTGGAACAGATCTACTCCGGATGACGTGAGGCATCAGTATGAAATGGTGG AGGTGCTGGATGATTACTCTGAGGAGCTTGGTGTTTGTGTTACTCCCCTTATAAAGTTATCTGGATTTAAAACAGTATAC AAGAGCAATGCAGACAAAAGTGCCATAAAATGGATACCAAGAAGAGAAATGTTGCGGTTTTCGCACCAAGTGCCTTCTTG GTTGCTGAAAGGGGAGGCGAGCAATTTGCCAGAACGGTGTTGGGACCTTGATCCAGCTGCAACTCCGGATGATCTTCTTC ATGCTGCTGCTACAGAAGCAAATGCATTGTAG
CDS sequence (LotjaGi1g1v0010100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGCCACATTTGAGGTTTACATTGCTTCTGAGATCAAACATAATGGTGAGCTAGATTATTATGCGATTCTTGGATT AAAACCTTCTGCTGATAAAGAGGCTGTTAAGAGAAGTTACAAGAAGATGGCAGTATTGCTTCATCCTGATAAGAACAAAT GCGTGGGAGCTGATGGGGCGTTTAAACTTATTTCTGAGGCATGGACTTGGCTTTCAGATAGTGCTATGCGTAGTTCTTAC GATCTCAAGAGAAACTCACAGTCAGGTGGGATTAGTCACTCAAAATTTTCTTCTGTCCATGCCACTGGGGCTACAGTTTA TAACAAAAAATGTTCCAATTTGTCAACCTCTCGAGGTGGGCTCGACACCTTTTGGACAATCTGCACCTCCTGTAAGGTTC AGTATGAGTATCTGCGAAAGTATGTGAATAAGAAACTCTCTTGTAAGAACTGCCGTGGCACTTTTGTTGCTGTTGAAACC GGGGCAGCCCCAGCAAATGGTTCATTTCCATATTCTCCTTGGTCACATGTGCCAGGAAATGGGTATGGAAGTCATTCATT TGATGGGGTTACATATGTTCCAACTAATGCCACCTATTTCAATGGGAATGGGGTCACCGGATACCATTCTGGACATGGAT ATGAGTATGCTGCAAATGTTTCATTTCAGTGGGGTTCTACTGGACTCATCCATCAAAATGGATCAACTACGTTACCTGCT GATTCTGTTTATCAGGCCAATGGAAATGCGAAGAGGGGAAGACCAAAACTCAAATCAGGAGCTGATGGAAGGAATCACGT CACAGAGACTGTGGTCAACACAAATCCCGATGCATCATTCTCCTGTAATGAACCACAGGAAGTTAAACCAAGTAGACCTG ACAAGAAACGGAAAGTTGTGGGAGCCAATTGCAGAAATGGCTATGAAGAAAAAGGGTCTCAAGGTGCTTCAGAGGCAATA GTGTCTAATGGAAATAATAGCGTCGGACTTAGCCAGAAGCTTTCCTGCACAAATGACATTCATACCAAGCAGTTCTCCAT GGCACCGGCATTTGACGCGAGAAAGTTATTGATTGAGAAGGCCAGGACTGAAATTAGGAAGAAATTGGAAGAGATGAAGT TGTCATCTGAAGCTGCAACACTAAAAGAGAGAGAAAAAGCTCAAGCTGAAGTTGGTCAAGTCAAAAGAGAGACGTGTAGA AGAGCAGTTCTGAGTGTTCCTGGTCTTGAATTAGAGCACAGTAAAGCTGGTCCAATCTCAATAACTGTCCCAGATTCTGA CTTTCATGACTTCGATAAAGATCGGGCGGAGGAATGCTTCAGGCCAAAGCAAATATGGGCCTTGTATGATGAGGAGGATG GCATGCCACGATTATATTGTCTGATCCGTGAGGTTATATCTGTTAATCCATTTAAGATTCATATCAGTTACTTGAGTTCC AAAACTGATAGTGAGTTTGGCTCAGTAAAGTGGCTTGATTCAGGTTTTACTAAATCCTGTGGAAATTTCAGGGCTTGGAA TCCTGATGTTGTTGACCAAGTTAACATATTTTCTCATGTTCTAAGTAAGGAGAAGGCTGGTCGAGGTGGCTGCGTTCGCA TATACCCCAGAAGTGGTGATATTTGGGCTGTTTATCGAAATTGGTCACCGGATTGGAACAGATCTACTCCGGATGACGTG AGGCATCAGTATGAAATGGTGGAGGTGCTGGATGATTACTCTGAGGAGCTTGGTGTTTGTGTTACTCCCCTTATAAAGTT ATCTGGATTTAAAACAGTATACAAGAGCAATGCAGACAAAAGTGCCATAAAATGGATACCAAGAAGAGAAATGTTGCGGT TTTCGCACCAAGTGCCTTCTTGGTTGCTGAAAGGGGAGGCGAGCAATTTGCCAGAACGGTGTTGGGACCTTGATCCAGCT GCAACTCCGGATGATCTTCTTCATGCTGCTGCTACAGAAGCAAATGCATTGTAG
Protein sequence (LotjaGi1g1v0010100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVATFEVYIASEIKHNGELDYYAILGLKPSADKEAVKRSYKKMAVLLHPDKNKCVGADGAFKLISEAWTWLSDSAMRSSY DLKRNSQSGGISHSKFSSVHATGATVYNKKCSNLSTSRGGLDTFWTICTSCKVQYEYLRKYVNKKLSCKNCRGTFVAVET GAAPANGSFPYSPWSHVPGNGYGSHSFDGVTYVPTNATYFNGNGVTGYHSGHGYEYAANVSFQWGSTGLIHQNGSTTLPA DSVYQANGNAKRGRPKLKSGADGRNHVTETVVNTNPDASFSCNEPQEVKPSRPDKKRKVVGANCRNGYEEKGSQGASEAI VSNGNNSVGLSQKLSCTNDIHTKQFSMAPAFDARKLLIEKARTEIRKKLEEMKLSSEAATLKEREKAQAEVGQVKRETCR RAVLSVPGLELEHSKAGPISITVPDSDFHDFDKDRAEECFRPKQIWALYDEEDGMPRLYCLIREVISVNPFKIHISYLSS KTDSEFGSVKWLDSGFTKSCGNFRAWNPDVVDQVNIFSHVLSKEKAGRGGCVRIYPRSGDIWAVYRNWSPDWNRSTPDDV RHQYEMVEVLDDYSEELGVCVTPLIKLSGFKTVYKSNADKSAIKWIPRREMLRFSHQVPSWLLKGEASNLPERCWDLDPA ATPDDLLHAAATEANAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 650 | 650 | 1.2E-253 | – | |
| PANTHER | 1 | 650 | 650 | 1.2E-253 | – | |
| Gene3D | 9 | 101 | 93 | 1.6E-20 | ||
| SUPERFAMILY | 13 | 84 | 72 | 7.33E-20 | ||
| SMART | 19 | 76 | 58 | 5.0E-18 | ||
| Pfam | 20 | 81 | 62 | 1.4E-18 | ||
| ProSiteProfiles | 20 | 84 | 65 | 16.143 | ||
| CDD | 20 | 73 | 54 | 1.76061E-17 | ||
| PRINTS | 22 | 40 | 19 | 2.9E-9 | ||
| PRINTS | 40 | 55 | 16 | 2.9E-9 | ||
| PRINTS | 56 | 76 | 21 | 2.9E-9 | ||
| Coils | 358 | 378 | 21 | - | – | |
| Pfam | 420 | 626 | 207 | 6.4E-74 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0010100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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