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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0020900 |
Transcript ID | LotjaGi1g1v0020900.3 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase, putative; TAIR: AT5G55560.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q6ICW6|WNK11_ARATH Probable serine/threonine-protein kinase WNK11; TrEMBL-Plants: tr|A0A151QY10|A0A151QY10_CAJCA Putative serine/threonine-protein kinase WNK11; Found in the gene: LotjaGi1g1v0020900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:2561369..2563146) extracted from Lotus japonicus Gifu genome v1.2.
AGGGTTAGGTTTAACTTTCAGCACTAGTTTTTTTGTAGTGATTTGATTTTGATTTTGATAGTTCTTTGCCTCTAATCAGT ATTGTAATTTTGTGTTCAATTGTGGTGAATTAGATGCCGACTGTTAACCCTGATCCGTCTGACAAAGATGCTGAGCCGTT TGTTGAAACCGATCCGACTGGCCGCTATGGCCGATACAGCGAGCTATTGGGGAGTGGTGCTTGTAAGAAAGTGTATCGCG CATTTGATCAGCAAGAAGGAATTGAGGTGGCTTGGAACCAAGTGAAGCTGAGGAACTTTTGTGATGACCCTGCCATGGTG GAAAGGCTTTACTCTGAAGTGAGGCTTCTCAGAAGCTTGAAAGACAGAAATATCATTGCCCTTTACAGTGTGTGGAGGGA CGAGCAGCGAAACACGTTGAACTTCATCACTGAAGTGTGTACCAGTGGGAATCTGAGGGAGTACAGGAAAAAGCACAGGC AGGTTTCCAAGAAGGCCCTGAAGAAGTGGTCTAAGCAGATCCTGAAAGGGTTGGACTATTTGCACACACATGATCCCTGC ATCATCCACAGAGATCTCAATTGCAGTAATGTGTTTGTCAATGGGAATACTGGCCAGGTAGCAATTTCATTCATATTTTA TATTTTCCTTCACATGTTTGCTTGATTGACAAGTTGAAAATCATGGAAAAATTGATAGAATTGTAAAATCATCATAGGAT GCTTGGTTTCACGGTGAAATGCTCCAGAATCACTTCTATTAGAAGCTACAAGTCTGGTTGTATGTTGGACATACACTCCA AAGCCCATTAGTGGAGAAGCTTTAGGTTTTAGCTTATGGATTAACATAATTTTTAAGTCATAATGTGCAACCAAACATGC ACTTACACTTGTTATCTCAAACAAGTTACCGTGTTCAAAAACCTAAGTCGGTTGTTATAAACTACTAGGTTGGTCAAATC TATTAAGGAACACAATTAGTACTTAATTTGTAGTTCAGAACACAATTTGAAAACTATATGTATTCTTTCTTGCTGTTTAT TACACAATAACTTAGTAACTTCAAGAACAATGAGAGGGAAAATAAGTTTTTCATCATCAGCAGGTATATTGCTTGCTTTC CACCTAATATCTGTGTCCATCTGCCTTTGGTGTTTAAATCAAAGCAAGCTGTGCAACAATTTTGTTTTGTCAACTATTAA AACCAAGTTATTCTTAAAGTGGTTTGTATAAGCTTATCTTTCCTCATAGAAGCTTTATCCCCAAAATTGATTATGCCTTT AGAACCGATTGCAGAATGATTTCCAAACATGCTCTTCTGATTTAACAACCAAAAAGGCATTGTTAGTAACCTTTTTATTC CATGGTTATCAGGTTAAGATTGGTGACTTGGGTTTGGCAGCAATTGTTGGCAAGAACCATTGTGCACACACCATTCTCGG CACACCAGAATTCATGGCTCCAGAGTTGTATGATGAAGACTACACTGAATTGGTGGACATATACTCATTTGGGATGTGTG TGTTAGAGATGGTGACACGGGAGATTCCTTATAGCGAGTGTGACAATGTTGCAAAGATATATAAGAAGGTCTCTTCTGGG TTGAGACCTGCAGCTTTGAACAAGGTGAAAGATCCAGAGGTGAAGGAATTCATTGAGAAGTGCCTTGGTCAACCAAGGGC AAGACCTTCTACTGCTGAGCTTCTCAAAGATCCTTTCTTTGATGAGCTTGTTGATGATCAGGAATGAATGCTCTCAGTTT TGGAACTCAGTTCAGCAT
CDS sequence (LotjaGi1g1v0020900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGACTGTTAACCCTGATCCGTCTGACAAAGATGCTGAGCCGTTTGTTGAAACCGATCCGACTGGCCGCTATGGCCG ATACAGCGAGCTATTGGGGAGTGGTGCTTGTAAGAAAGTGTATCGCGCATTTGATCAGCAAGAAGGAATTGAGGTGGCTT GGAACCAAGTGAAGCTGAGGAACTTTTGTGATGACCCTGCCATGGTGGAAAGGCTTTACTCTGAAGTGAGGCTTCTCAGA AGCTTGAAAGACAGAAATATCATTGCCCTTTACAGTGTGTGGAGGGACGAGCAGCGAAACACGTTGAACTTCATCACTGA AGTGTGTACCAGTGGGAATCTGAGGGAGTACAGGAAAAAGCACAGGCAGGTTTCCAAGAAGGCCCTGAAGAAGTGGTCTA AGCAGATCCTGAAAGGGTTGGACTATTTGCACACACATGATCCCTGCATCATCCACAGAGATCTCAATTGCAGTAATGTG TTTGTCAATGGGAATACTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCAGCAATTGTTGGCAAGAACCATTGTGCACA CACCATTCTCGGCACACCAGAATTCATGGCTCCAGAGTTGTATGATGAAGACTACACTGAATTGGTGGACATATACTCAT TTGGGATGTGTGTGTTAGAGATGGTGACACGGGAGATTCCTTATAGCGAGTGTGACAATGTTGCAAAGATATATAAGAAG GTCTCTTCTGGGTTGAGACCTGCAGCTTTGAACAAGGTGAAAGATCCAGAGGTGAAGGAATTCATTGAGAAGTGCCTTGG TCAACCAAGGGCAAGACCTTCTACTGCTGAGCTTCTCAAAGATCCTTTCTTTGATGAGCTTGTTGATGATCAGGAATGA
Protein sequence (LotjaGi1g1v0020900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPTVNPDPSDKDAEPFVETDPTGRYGRYSELLGSGACKKVYRAFDQQEGIEVAWNQVKLRNFCDDPAMVERLYSEVRLLR SLKDRNIIALYSVWRDEQRNTLNFITEVCTSGNLREYRKKHRQVSKKALKKWSKQILKGLDYLHTHDPCIIHRDLNCSNV FVNGNTGQVKIGDLGLAAIVGKNHCAHTILGTPEFMAPELYDEDYTELVDIYSFGMCVLEMVTREIPYSECDNVAKIYKK VSSGLRPAALNKVKDPEVKEFIEKCLGQPRARPSTAELLKDPFFDELVDDQE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
MobiDBLite | 1 | 22 | 22 | - | – | |
PANTHER | 1 | 291 | 291 | 2.0E-184 | – | |
PANTHER | 1 | 291 | 291 | 2.0E-184 | – | |
Gene3D | 15 | 107 | 93 | 1.2E-24 | – | |
SUPERFAMILY | 21 | 285 | 265 | 6.74E-65 | ||
CDD | 24 | 284 | 261 | 1.98869E-155 | – | |
ProSiteProfiles | 26 | 284 | 259 | 40.852 | ||
Pfam | 29 | 284 | 256 | 1.1E-51 | ||
Gene3D | 109 | 287 | 179 | 5.7E-51 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0020900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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