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LotjaGi1g1v0021000.2

Overview

Field Value
Gene ID LotjaGi1g1v0021000
Transcript ID LotjaGi1g1v0021000.2
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Kinase, putative; TAIR: AT5G55560.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q6ICW6|WNK11_ARATH Probable serine/threonine-protein kinase WNK11; TrEMBL-Plants: tr|A0A151QY10|A0A151QY10_CAJCA Putative serine/threonine-protein kinase WNK11; Found in the gene: LotjaGi1g1v0021000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:2571991..2575164) extracted from Lotus japonicus Gifu genome v1.2.

TCACTTCTCTTTCAGTTTGGAGCTTTGTCAGCTTCTTCTCTTTTCTGCCGCAACAAGTTTCAAGCTTTCTTCGGTTTTCT GAACTTCAGGCTCAAGCAATCGGTTTCTTCATGGTAAATTTTTCATCTTTATCATCATCTCAGCCTATTAAGCATTTTCC CCTGTTATGATTTTCATGTGAAATGTGTCAAATTCTCACAAAAGCCATCAAATTTTAAGCATTTTTCAGCTTTTTTGGCG TTACATGCTCTTTGCCTCTTCAATTTTGACATGAGTTCTTCTAATGTATGAGGTTTATCCACACGTAACTCTTTGATTGT TTGTTTTGTTTGGTTTTGATTGAATTGCTGATTTTTTTTTTTTTTTCAATTTTTCATTTTCAAAAGCTGAATCTTTATCT GAACTTTAATGGGGTTGTCTGATTTGCTTCCTTTTTGTTTCACAAAATTCAGTGACATGCTGAATTTTTTTCCCCTAGAA AACCAAAATCTCCAGTACTAATTTTTCTTAATGATTTTATTTTGACCTTAATTTTGAATTTTGATTACTCCTGCACTAGT ATTTCATAATGATTTGATTTGATTTTGATTTTGGTTTTAATTGTGAGTTTGATTACTCCAGCCCTTGTTTTTCAATTTTC ATAGTGATCTGATTTGATTTTAATGTTGATAACTCCAGCTCTAGGTTTTCATAGTGATTTGATTTTGTTTTGGTTTTAAA TTTTGATATTGATACCTCCAGCCTTAGAGTAGAGTCAGGGTTAGGCCTAACTCTGATACAAATTAGGGTTAGGTTTAACT TTCAGCACTAGTTTTTTTGTGGTGATTTGATTTGATTTTGATGGTTCTTTGTCTCTGATCAGTGTTGCAATTTTATGTCC AATTGTGGTGACTTAGATGCCGACTGTTAACCCTGATCCGTCTGACAAAGATTCTGAGCCGTTTGTGGAAACCGATCCGA CTGGTCGCTATGGCCGATACAGTGAGCTATTGGGGAGTGGTGCTGTGAAGAAAGTGTACCGCGGATTTGATCAGGAAGAA GGGATAGAGGTGGCTTGGAACCAAGTGAAGCTGAGGAACTTCTGTGATGACCCTGCCATGGTGGATAGGCTTTACTCTGA GGTGAGGCTTCTCAGAAGCTTGAAAGACAAGAACATCATTGCTCTTTACAGTGTGTGGAGGGATGAGCAGCGAAACACGC TGAACTTCATCACTGAGGTGTGTACCAGTGGGAATCTGAGGGAGTACAGGAAAAAGCACAAGCAGGTTTCCATGAAGGCC CTGAAGAAGTGGTCTAAGCAGATCTTGAAAGGGTTGGACTATTTGCACACACATGATCCATGCATCATCCACAGAGATCT CAATTGCAGTAATGTGTTTGTCAATGGGAATACTGGCCAGGTAGCAATTTCAGTCAAACTTTAGTTTTTCCTTCACATGT TTGCTTGATTGAATAGTTGAAAATCATGGAAAAATTGATAGATTTTTAAATCCTTATAGCATAGTTTGGTTCCACAGTGA AATGCTCACTTCTGATTAAAAGCTACTACTAGTCTTACACCATGTTTGTTTGTGTGTTGGACTGTTGGTCATTAATGGAG AAGTTTTAGGTTGTAGCTTATGGATTGGTGTAATTTTGAAGTACTAACATGCACATAGATTATGACTAAACCTGTCTTGT ATACGGAGAAAATCATGAAACCAAATATGACTTACACTTTTTACTTAATTATGATTGTTTTAACTGTTTCTCATTTATGT CAAACTAGTTACCGTTGTTCAAGGTCTTAAGTCGGTCGTCATACACCACTAGGTCGGTCAAATCCTGCAAAGGAACACAG TCCGGCTGGCACCAAGCCTTTTAAGGCGAAGTGTGACTTGATAAAATTAACTAACCAAGTACTCAATTTGTTAATCAACC TATGAAGGAACACAATTTGATGACTATGTGTTTTCTTTCTTGCTGTTTATTACATAATAATTTTGTACCATCAAGAACAA TGAAAGGGGAAATAAGTTTTTCAAAGCATGTATATTGCTTGCTTTCCACTTATCTGCTTTTGGTGTTTATATCAAAGCAA GCTTTGCGATAATTTTCTTTTGTCAACTAATAAAACCAAGTCCAATCTCTTAGTAGATTTGGATCAGTTTTTCTTTCCTC TAATCAGTTTTGAAACCCCGAAACTACTTACAGAAACTTTCTCCCCAAAATTGATTATGTCTTTAGTATCAATTGCAGAA GAATTTCCAAAAATGTACTCATTGATTCTCTTTTGATGTAACAACCAAAAAAGCACTGATAGTAACTTTTTTCCCCGTGG TTATCAGGTTAAGATTGGTGACTTGGGTTTGGCAGCAATTGTGGGCAAGAACCATTGTGCCCACACCATTCTCGGCACAC CAGAATTCATGGCTCCAGAGTTGTATGATGAAGACTACACAGAGTTGGTGGACATATACTCATTTGGGATGTGTGTGATA GAGATGGTGACACTGGAGATTCCTTATAGTGAGTGTGACAATGTTGCAAAGATATATAAGAAGGTCTCTTCTGGGTTGAG ACCTGCAGCTTTGAACAAGGTGAAAGATCCAGAGGTGAAGGAATTCATTGAGAAGTGCCTTGGTCAACCAAGGGCAAGAC CTTCTGCTGCTGAGCTACTCAAAGATCCTTTCTTTGATGAGCTTGTTGATGATGAAGATGATGATGAAAACAGTGACTGT TCTGGTTCATAGTTGTTCTTTCTGTGATGAATATATGTTGATGGATTTGTGTTTTTCATTAGATTTATCTACTTTGGTTT TTCTTTTTTAAGTTACATATCAATTTGTGGGGCAAGACCGTTTGTTTTGTTTTGATTTTTCCCTTTGGTCAGCTTTGGAA TTGGATAAGGGTTAAACATTTGGTAACCTGGGGAGGGCTTAATTGGGGTGGTGTCAAATTTGTCTCTATTGTGACTAAAA TTGTAGGGTGAGTAGATATGATGTCTAAGTCTGAAGTGAACAAGTGGAGACTCAAATATTTGTTATGCTCCACTTGATCA ATCTTCTGGAATTGGTGTCAATTTGTACATATGAACCTTTCTTGGCTCACAAGCATATATTAAATGGCATATGATTGTTT TTTGGTACATATGATTTGATAATAAAGGTTTATAAATCAAATTCAATTATAATT
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0021000.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATGCCGACTGTTAACCCTGATCCGTCTGACAAAGATTCTGAGCCGTTTGTGGAAACCGATCCGACTGGTCGCTATGG CCGATACAGTGAGCTATTGGGGAGTGGTGCTGTGAAGAAAGTGTACCGCGGATTTGATCAGGAAGAAGGGATAGAGGTGG CTTGGAACCAAGTGAAGCTGAGGAACTTCTGTGATGACCCTGCCATGGTGGATAGGCTTTACTCTGAGGTGAGGCTTCTC AGAAGCTTGAAAGACAAGAACATCATTGCTCTTTACAGTGTGTGGAGGGATGAGCAGCGAAACACGCTGAACTTCATCAC TGAGGTGTGTACCAGTGGGAATCTGAGGGAGTACAGGAAAAAGCACAAGCAGGTTTCCATGAAGGCCCTGAAGAAGTGGT CTAAGCAGATCTTGAAAGGGTTGGACTATTTGCACACACATGATCCATGCATCATCCACAGAGATCTCAATTGCAGTAAT GTGTTTGTCAATGGGAATACTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCAGCAATTGTGGGCAAGAACCATTGTGC CCACACCATTCTCGGCACACCAGAATTCATGGCTCCAGAGTTGTATGATGAAGACTACACAGAGTTGGTGGACATATACT CATTTGGGATGTGTGTGATAGAGATGGTGACACTGGAGATTCCTTATAGTGAGTGTGACAATGTTGCAAAGATATATAAG AAGGTCTCTTCTGGGTTGAGACCTGCAGCTTTGAACAAGGTGAAAGATCCAGAGGTGAAGGAATTCATTGAGAAGTGCCT TGGTCAACCAAGGGCAAGACCTTCTGCTGCTGAGCTACTCAAAGATCCTTTCTTTGATGAGCTTGTTGATGATGAAGATG ATGATGAAAACAGTGACTGTTCTGGTTCATAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0021000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MMPTVNPDPSDKDSEPFVETDPTGRYGRYSELLGSGAVKKVYRGFDQEEGIEVAWNQVKLRNFCDDPAMVDRLYSEVRLL RSLKDKNIIALYSVWRDEQRNTLNFITEVCTSGNLREYRKKHKQVSMKALKKWSKQILKGLDYLHTHDPCIIHRDLNCSN VFVNGNTGQVKIGDLGLAAIVGKNHCAHTILGTPEFMAPELYDEDYTELVDIYSFGMCVIEMVTLEIPYSECDNVAKIYK KVSSGLRPAALNKVKDPEVKEFIEKCLGQPRARPSAAELLKDPFFDELVDDEDDDENSDCSGS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 23 23 - –
PANTHER
PTHR13902
2 302 301 3.4E-191 –
PANTHER
PTHR13902:SF119
2 302 301 3.4E-191 –
Gene3D
G3DSA:3.30.200.20
16 108 93 5.8E-25 –
SUPERFAMILY
SSF56112
22 286 265 4.72E-65
IPR011009
CDD
cd13983
25 285 261 2.4056E-156 –
ProSiteProfiles
PS50011
27 285 259 40.64
IPR000719
Pfam
PF00069
30 285 256 4.2E-52
IPR000719
Gene3D
G3DSA:1.10.510.10
110 288 179 7.8E-51 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0021000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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