Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0023900 |
| Transcript ID | LotjaGi1g1v0023900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatidate cytidylyltransferase; TAIR: AT4G26770.1 Phosphatidate cytidylyltransferase family protein; Swiss-Prot: sp|Q1PE48|CDS3_ARATH Phosphatidate cytidylyltransferase 3; TrEMBL-Plants: tr|K7M4F7|K7M4F7_SOYBN Phosphatidate cytidylyltransferase; Found in the gene: LotjaGi1g1v0023900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:2882922..2889181) extracted from Lotus japonicus Gifu genome v1.2.
CTCAGCATCCTCCGGGACCCTCCATCGGTCAATGAAGACTGTTACGTGCATATCTCTCGTATTCTGAAATGTTTTCTGTT ATTCACTTATTCTCGTTTCCCTCAAACATAGCAAATCCACATCCATTGACATTTGACACACCCTTTTGTGTGTTGATCCT TTTGTCACCATTTTTGTTCATATCTCTTCAGCAAGGACTTTCTCCAAGTACGCAATCTTTTCAATTTTCACCTGCTTCTC CATTTTCCATTACTTTCTATCATTTCATCGTTAGAGTGATGATCCCATTTCTTTTTTGGGCACAACTTATGTCTTGTGAT AAAAAAAACGTTCTGATTTTGTGAGTATGTTCCTCAAAGATCTAGTGAGTGTGAGGATTTCTTTTGGGAATGGCTAAAAG AATTGAAGAACTTTGAACCGCAATTCATGTTTCACAATGGTTTGCACAAAGTGAATTTAACGAAAATCCAAACCGATACT ATATTCTAATATAAATTCATTTATATGTTGCATCTTGAATCAACCTAGACACTTACTATGTAACATTGTTGAATTCAGTC CATATACCTATATATCATGATCGTTTCATATCTAGTGTATGAATGTCACTAATTCATTGCTGAAATGTTTTATTACCCAT TATAGAATTCTTCAAGCATGTTAGGCTGGCATAAAACTTCCATTACTTTCCAAATAATGTTGCATTGAAATGGTCTCTTT TGGTTTCTCTTTTTCTTTTGATCTATGTATAAGAATATCATCAAAGTAAATATATTTATGTTTTATGCACATACATGATT GATGCTTCTTCTAAAATCATTTTTCCATTTGATGTTTCAGGGGAGGTCTCAGCCGATGCATGTATGTAACCCTCAAAATA TTTGAACTATCATTTTAACAATGAGAGACATGGATACATTTCATAATTGTAGTTCACCAAGAACACCAAGTGCTCGGCAA AGGAGACGCTCAAATGAGGTTAGTACAATGCATGTTTGGTTTCACGATTTACAAAGAAGCCAATGTACTTTTACTCAGAA GTTAAGATTTGTAGCTTCTAATTAGAAGTCATTATAGAGCATATCACAGTGGAAACAAACATGTTAATAGTCTGTCAACA TGTATAACTGTGTTTATTTGTAATTAAGGATACTGCTTTGATTGTGCAGTGATACTACAACATGACTTGTTAATTTGTTA TCTAGACCCTTTACATTTGATTACTTATCTAGGTGTAACTCAGCTTTATATAATTGATTGTTAATTAATCACTTCTTGAG GAATGAAGAATGCTAATTTTGGTTTAAGGTGCAGGGAAAACTACAGTGTTTAGTACAGGATGCTGTATATGTTTCCAAAG CTTCTTTATTATTATATTGATCCTTGACATCTATATTCTAAATTTTATCTACATGTAGGCATTTGATGAAATCATTATAT ACAAGTGGCATCTAAGTTTCCAAAGCTAGCATGTTTGGATTAACTTTTCTTTCTTTAGAATCAGTTCTGAAAACCAAAAG CTACTCACAAAAGCTTTTCCCTATAATTGATTCTGGTTTTAAAATCAATTGTAGAAGAATTTCCAAACATATGTATAAAT CTTTAAATCCAAAGCTGTTAGTAATGGGAAATGAAATCTGAAGAAGAAAAAAAGAGATCATTTTGGGGAATTTAACACTG ATCTTTGCTTTTTTGTGTCAGTTTCCTCCTGAGTTAAGCAAATCAAATGGAAACCTTTTACTTGTGGATGATAAACTTAA GTACAGATCAATGCGGATCAGGGCATACTCATCTCTGTGGATGCTAGCTGGTGTCTTACTAATCGTATACTTGGGTCATC TTTACATGTGGGCCATGGTTGTTGTTATCCAAATATTTATGGCCAGTGAGCTCTTCAATCTATTGAGAAGAGCTACTCAA GATAAACGTCTACCTAAGTTTAAGCTCTTGAACTGGTAAGCAATTAAGCATCCATGAAACTGCAATCCTAAGCAGTAATG ATACTTAGACATTCGAACAGTGCATACATTCTACAGTCACCTTATTTTTTTTCTCTATTTCTTTCTTCTTATCACATCAC ATCATATATCACATTCATTACTTCTCTTCTTCTCTTCCTTTCTCACATTAGGTGTCTGCACTATGCGGATGTCCACGCAT TATTTTCCATTCCTAAGTGATCATGTGCATGTGACAATTTTTTATCAATATATGTTGTTTCACAAAGATAACATTTTGAA CACCATGTCCAGGCATTTTTTCTTCACAGCAATGCTATATGTGTATGGCCGTATTCTCAGCCAACAACTTGTGAATACAG TGACCTCAGATAAATTCTTCTATAGAGTTGTGAACAACCTCATCAAGTATCAGATGGTTATATGTTACTTCTTATATATT GCAGGTTAGTACCTTCATATGTTCCACTCCTAGGAATGTTGATGTATACATTCGGATTATGATCCTCCCATGTCATGGAT CTGGCTTCCTCACAGTCACATTTCCCTAAATTCATTGCAATCATAGCTTTGTAGCCATCTAACCAAGATCAGAAGTTGTC TCATCTTGATCAGGCAGTTATAAAGCAATGACTGCAGTAAATTTAAGACTTTTCAACTGCACAAAATTCAAGTCCTTCAA GTCACATGGTGAAATTTTACGTCTATCTTTCTCTTCATCAATATTTTGAGAATCTCATTCATTTAATAGGTATGAAGAGA AAGATAGATACAAAATTTCAACATGTCGCTATTATATGGAGTTTCCACAATCATGATCCATGCTTATCCAATCCCAATTA TTTTCAACCAAAACTTGAAAAGAAAGGAAAAGTAAATAATTTTACATGTTTCGCTATTATTCCTATAACGCCTATGGATA AACAGAAATCTGAGTCAACCTTGTTGAATAACTTAATTTTGCTATATGATATCTTACTTTTTCAGGTCTTCTGCTAATTC CAGTGTTTGTTATTGCCCTGTAAATAAATCCATTCCTGAATAAGTCATTTCATCTGTGATTTCAGGTTTTGTATGGTTTA TTCTTTCATTAAAGAAGAGATATTACAAGTATCAATTTGGCCAGTATGCATGGACACATATGATACTTATTGTTGTGTTC ACCCAATCTGCATTCACTGTAGCCAATATATTTGCAGGGATATTCTGGTAACATGACTTCTGATATATAACTTGATGATG AATCTATATTTTCTATTTCCTTTCTTTCATATTTTATTGTTGCAACCTAACATGTTAATACTATTATGAAGGTGTCTTTT CCCTGCATCCCTTATTGCTATGAATGATGTTGCTGCATATTTCTTCGGTTTCTTCTTTGGGAAAACACCTCTTATCAAGC TATCTCCAAAGAAAACATGGGAAGGTTTTATTGGAGCATCTGGTGCCACTATGGTTGCTGCATTTACGGTACGTATCAAT TAGTGACACATGATGCACTTGAATGCAAACTTTTTAGATTCAAGACAGACTTTATTTTGTTACTTTTCTATCTATTGGAA CTAGCACTAATAGATCATCTTTGTGGATCTGACAACCTCTTCCCTATAGTTGATTTGATGATGTTCTTCTGTTTCATTAT GATTTCACCATTATTTGTGCAGTTTGCAAAGATCTTGGGTCGTTCCCAGTGGCTAATATGTCCAAGGAAGGTACAACATT CTTGATCGAGTGCAATCAAGTAAGAGGAAATATTTGTGCTGTTCCTAATGATGATCATTTGGTGTAATGAATTCAGGACT TGTCAACTGGTTGGCTTCAGTGTGACCCTGATCCAATTTTTAAGCCAGAGCACATTCCATTGCCAGGATGGATTTCTCAT TGGGTAAGTTAGAGTTCTTGAGATTAAATTCTTTTTAAGGCTAGTATAAATGTGACATATAGCGTGTGTTTGAATACCAG TCAAGTGTAACGTGCACAAACTCTCATCCCAAAAAGAGTTGCATTAATTTTTTTGTCTCAGAGTGCTAATGTTTGCACTG ATGCCAACTGGTATCCAAAGGTTGGTTGGATATTGATCTTGAAGGTAAGTAAACATCTATTAACTTTCTGGAAGCTTGAT GATCAAAATGTGAAACAAATATACAGTATTAAGATCAAATGAATACAAGGCAAACTACTTGCATCTTTAGTTGGTGTTAA CAGACAGTATTCATCATGAAAATACTTAACCTTCTCTTGCTCAAAGACACTGCACTATTGGATTTGTTTCATCATGAAAA AGAAGACTTATGTAAGGAGAGCTAAGTAGTCTTCATACACAAAACAAAACCATATGGAAAGCGTGTGTTGACACTTCATT AATCATTGCTGATATCATATGATTAGAATCATATGATTCAGTATTACCGGTCATCTTCTGAATTTAAAGGCTAAGTTTTT CATTTGGAAACATCTTGTAGATTACATGGAAAGAGATAGCAGTTTTGCCAGTACAGTGGCATGCCTTGTGGCTGGGACTA TTTGCCTCCATCATAGCACCATTTGGCGGGTTTTTTGCTAGTGGCTTCAAAAGAGCCTTTAAAATCAAGGTCTGTTGTTT CTCTTCATATTCATAGTAGAGTTTATTTTAAAACTCCCAAACTTAGCAGTAGTCTCTTTCAATTAATACAGGACTTTGGT GACACTATACCTGGACATGGTGGATTTACTGACAGAATGGATTGCCAGGTTTGCATATAGATAGCTTGAACTAGAATAAT CCTTGGTTGTATCTGAATAGGCAACAATTTAATTCAGGATACAATAATTTATATTTGACACTCAAAAATCATCCCTTCCG AAATACTTCAACCTTCTTAATTATAAGCTTCATCAACAACTTTGTCCTGATAACTTGACGTGTCAGAGTGCAATTTATTA GTGTGTATTTGGACTTTCATTGAATTCAATGCTGATTCAAGTTGATCTTAACTCTACAAATTACAAAATCCTTCTTCTCC ATTTATGCGTTGGGATCTCAGAAATCACGTTTGTGTTGGTGCTGCAAACACATAAACAAAGCTATTGACATTTCCAAGCC CTTGTGACATCTGCCTTGTTTAAATGCTGAACACTTAGTCATGGCATGATCCTCCAATTTCATCGCAAATAATGAAGTAC TTGTTATGAAAATGTAATACAGCAAAGTGTACTAATATATTTGTGCTGTTGTTGTGACTGTTGTGTTTTATACTGTGCTA TGCATCCTTTTCAGATGGTGATGGCTGTTTTTGTTTACATCTACCATCAATCATTTGTTGCCCGCCAAGACTACTCTGTT GAGATGTTTTTGGACCAGGTAAGCCTTTCGTTTAACCAATTCATAGAGTAATTTTCAATCATGTGCAAAATTAGAGGATT CTGTTTCCTTCTGTTTTCTTTCAATTCCAATTTTGCATAGATATGAAGGATAGTTTCACTTTGGCCATTACTCAGACAAG TGGTTAAATGTTTTGTTATCAATCATTTGAAATTTTCTATTTCCTGTGTAGATAACAAGGGACCTTGGTTTTGAGGAGCA ACTATCTCTCTACACAAAACTGGGGCAGATATTACAAGAAAGGAATTTTATCCAGTAATGACAAGTTCACTATGTACATT TTATGAACCATGCTTTAATTGATGTTATAGTTAAAGATGATGACCAAGTTGGAACAGATGGTGGAGATTAGTAAAGAATT TTGTTAAGGCCTTTCCCTTCTAGCTGCTGGGTATATGTAGTAGCGAGTACAGAGATCCTTGCATTGCTTATTTAGTTATT TTCCTTCAAGGATTAACCAACTATCCCAAAAGCTTAAACTATAATGCACAGAGCCACCTACCTTATGGTGAAACTCAGAT TTTTTTATTAGAACTCTAGACCACATGACCAAAAGTTTAAGCTGTTGGGCCAAGATGAATGATTTTATATTATATTTCTA ACTTTCAAACAGTAACGTACAATGGAAAGGAAAAACAAACAGGACAAGTATAGCTCTTTGTTAGGGCTTTCTACTATTTT TGTTTTGTTAGTGCTTTCAATAGTTAATGCAGAGATATAGACACTATGGATTGATAATTTTTTTCTTAATATTCTTCAAA ATTCAATGAAAAATAGTTTATTTTCTCACAACTTACATCAGCCGAATGAAATTCCCTTCAAATGGACAGGCACTTTCACT TTCCTAATTTGTTTATTTTGTCATCTGGTAATGTACTGAACCTCTGCATGTTCTCTCAACCATTCAAGGACCTTAGCTCC TTCTAGTATTTCTTGAACCT
CDS sequence (LotjaGi1g1v0023900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAGACATGGATACATTTCATAATTGTAGTTCACCAAGAACACCAAGTGCTCGGCAAAGGAGACGCTCAAATGAGTT TCCTCCTGAGTTAAGCAAATCAAATGGAAACCTTTTACTTGTGGATGATAAACTTAAGTACAGATCAATGCGGATCAGGG CATACTCATCTCTGTGGATGCTAGCTGGTGTCTTACTAATCGTATACTTGGGTCATCTTTACATGTGGGCCATGGTTGTT GTTATCCAAATATTTATGGCCAGTGAGCTCTTCAATCTATTGAGAAGAGCTACTCAAGATAAACGTCTACCTAAGTTTAA GCTCTTGAACTGGCATTTTTTCTTCACAGCAATGCTATATGTGTATGGCCGTATTCTCAGCCAACAACTTGTGAATACAG TGACCTCAGATAAATTCTTCTATAGAGTTGTGAACAACCTCATCAAGTATCAGATGGTTATATGTTACTTCTTATATATT GCAGGTTTTGTATGGTTTATTCTTTCATTAAAGAAGAGATATTACAAGTATCAATTTGGCCAGTATGCATGGACACATAT GATACTTATTGTTGTGTTCACCCAATCTGCATTCACTGTAGCCAATATATTTGCAGGGATATTCTGGTGTCTTTTCCCTG CATCCCTTATTGCTATGAATGATGTTGCTGCATATTTCTTCGGTTTCTTCTTTGGGAAAACACCTCTTATCAAGCTATCT CCAAAGAAAACATGGGAAGGTTTTATTGGAGCATCTGGTGCCACTATGGTTGCTGCATTTACGTTTGCAAAGATCTTGGG TCGTTCCCAGTGGCTAATATGTCCAAGGAAGGACTTGTCAACTGGTTGGCTTCAGTGTGACCCTGATCCAATTTTTAAGC CAGAGCACATTCCATTGCCAGGATGGATTTCTCATTGGATTACATGGAAAGAGATAGCAGTTTTGCCAGTACAGTGGCAT GCCTTGTGGCTGGGACTATTTGCCTCCATCATAGCACCATTTGGCGGGTTTTTTGCTAGTGGCTTCAAAAGAGCCTTTAA AATCAAGGACTTTGGTGACACTATACCTGGACATGGTGGATTTACTGACAGAATGGATTGCCAGATGGTGATGGCTGTTT TTGTTTACATCTACCATCAATCATTTGTTGCCCGCCAAGACTACTCTGTTGAGATGTTTTTGGACCAGATAACAAGGGAC CTTGGTTTTGAGGAGCAACTATCTCTCTACACAAAACTGGGGCAGATATTACAAGAAAGGAATTTTATCCAGTAA
Protein sequence (LotjaGi1g1v0023900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRDMDTFHNCSSPRTPSARQRRRSNEFPPELSKSNGNLLLVDDKLKYRSMRIRAYSSLWMLAGVLLIVYLGHLYMWAMVV VIQIFMASELFNLLRRATQDKRLPKFKLLNWHFFFTAMLYVYGRILSQQLVNTVTSDKFFYRVVNNLIKYQMVICYFLYI AGFVWFILSLKKRYYKYQFGQYAWTHMILIVVFTQSAFTVANIFAGIFWCLFPASLIAMNDVAAYFFGFFFGKTPLIKLS PKKTWEGFIGASGATMVAAFTFAKILGRSQWLICPRKDLSTGWLQCDPDPIFKPEHIPLPGWISHWITWKEIAVLPVQWH ALWLGLFASIIAPFGGFFASGFKRAFKIKDFGDTIPGHGGFTDRMDCQMVMAVFVYIYHQSFVARQDYSVEMFLDQITRD LGFEEQLSLYTKLGQILQERNFIQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 51 | 51 | - | – | |
| MobiDBLite | 1 | 30 | 30 | - | – | |
| PANTHER | 4 | 422 | 419 | 5.6E-250 | ||
| PIRSF | 4 | 424 | 421 | 6.0E-154 | ||
| PANTHER | 4 | 422 | 419 | 5.6E-250 | – | |
| Phobius | 52 | 70 | 19 | - | – | |
| Pfam | 52 | 382 | 331 | 5.5E-85 | – | |
| TMHMM | 52 | 69 | 18 | - | – | |
| Phobius | 71 | 75 | 5 | - | – | |
| TMHMM | 73 | 95 | 23 | - | – | |
| Phobius | 76 | 94 | 19 | - | – | |
| Phobius | 95 | 105 | 11 | - | – | |
| Phobius | 106 | 127 | 22 | - | – | |
| TMHMM | 108 | 127 | 20 | - | – | |
| Phobius | 128 | 146 | 19 | - | – | |
| Phobius | 147 | 170 | 24 | - | – | |
| TMHMM | 147 | 169 | 23 | - | – | |
| Phobius | 171 | 181 | 11 | - | – | |
| Phobius | 182 | 205 | 24 | - | – | |
| TMHMM | 182 | 204 | 23 | - | – | |
| Phobius | 206 | 210 | 5 | - | – | |
| TMHMM | 209 | 231 | 23 | - | – | |
| Phobius | 211 | 232 | 22 | - | – | |
| Phobius | 233 | 243 | 11 | - | – | |
| Phobius | 244 | 263 | 20 | - | – | |
| TMHMM | 244 | 266 | 23 | - | – | |
| Phobius | 264 | 318 | 55 | - | – | |
| Phobius | 319 | 339 | 21 | - | – | |
| TMHMM | 319 | 341 | 23 | - | – | |
| ProSitePatterns | 340 | 366 | 27 | - | ||
| Phobius | 340 | 424 | 85 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phosphatidate cytidylyltransferase activity | Catalysis of the reaction: CTP + phosphatidate = diphosphate + CDP-diacylglycerol. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transferase activity, transferring phosphorus-containing groups | Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi1g1v0023900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…