Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0035600 |
| Transcript ID | LotjaGi1g1v0035600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ras-related GTP-binding protein, putative; TAIR: AT5G54840.1 Ras-related small GTP-binding family protein; Swiss-Prot: sp|P87027|SPG1_SCHPO Septum-promoting GTP-binding protein 1; TrEMBL-Plants: tr|I1JJ70|I1JJ70_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0035600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:4874565..4879388) extracted from Lotus japonicus Gifu genome v1.2.
TGGAAGGACTGAATCTAATGGACAAAACATTGTCTGTTCAAGGAGCTCGTATTTCATTTTCTATATGGGATGTTGCAGGT GCTTTTTGGTTAAACTTTCTTTTTCTATGTCACTATGCTCTTCATTTACTTCTTGGTTTTTTCTCTTTTCTATCTTTTGT GGGGTTGATAAGTGAATCAGTTCAAATTTTTATATGTAGGTGATAAAAATTCTCTGGATTAAATTCCTATTGCTTGTAAA GATTCAGTTGCTATTTTGATCATGTTTGATCTCACTAGTCGTTGCACACTTCACAGGTATAGGCTGAGAAAATTCACATC TATATGCTACATTCTGTTGGAAACATTTTTTAGCAACATTTTTTTGAAAGGCATTTTTTAGCAACATAATGGTAGAAAAC TAGAAATAATTGTTTGTGTTTTGTACTCTTCTTTGTTTGTGCAGTGTTGTTAGATGGTATAGTGAAGCAAGAAAGTGGAA TCAGGTACCTTGAATTAGAGATTTATCTGGTTAATACTTCTCTTATTACTAGAATTAGATTCTGTGGTAAAGTAAATGCC ACTGATTAAAGTAATTAAGAGAAAAGCTATGAAGTATATAGTCCAAATATTGGACAAAGTAATTACTTATAATTACTTAT TTTCAAGTTCAAATATTAAGTGTCCTATTTATTTATTTTTATATCAAAATAATTGAGCAGATAAATTCCATATTTGATTT ACTTTTGGTGAAAATTTCTGACCATCATTATTCACTTGCAGAATGCAATTCCCATTCTGATAGGAACCAAGTTTGATGAT TTTGTTAAACTCACCCCAGATTTGCAATGGACCATTGTAACACAGGTAAATGAATAATAATTAAGGCTGCAACTTATATT AAATGGGTTTATTAGGATTTAGCTCATTTAAAATGAGATACATCATTTTAAAAGTAAAATAAGTTATCACTATCGCTTAT TAAGAAATTAATGTTGAAATTTAAAGAATTTCATAGTTATGCATATGCAAGTATATAATAACAGTCGTGATTGTTAATTC TCCATCAATTAGTTACACAATCACTACAACAAAACTTGTGTTTAGCGACGGACATTTTGCGGCGGTTATGCATAAACCGC CGCAAAATGTAAACTTGAGGCGCTTTTGCAGGCGGTTGAGCAAGCCCCCGCAATTTTCGTACAATGTGCGGCGGTTTTCT TCAATTTGTGGCGGTTTTTTTGACATTTGCGGCGGTTACTTCAGGGGCGGTTCAACCAGGCGCCGCAGAATGATTAAATT AAATTAGAAAACCTAAAATTAAACCCCTCACCTCATATCGCGTTTTTCACTCTCCTCTACCTCACTTCACGTTGAACCTC TCTCAGATCGCGATTCCTTCACTCCTTCTCAGCGATGGCGAACTCCATGGCTTGAACCTTTCAGATCGCGATTCCCACCT CACCTCATGGATTGAAGGTAAGCACTTCTTCCCATCTCACGATTAAATCAGCGATTTCAGGTTTGTGATTTGAATTTGTT TGTTTTGGTTAGGAATTAGGGCTCAAATTTCTCTTGTTTTGGCAAAATCGAGTGGTTTCCCGGGTTTGGTTTCTTCGATT TCTTCCACTGCGCACGCTCTGCTTCGGATCCAAACAAGGTGAGCCTTCTCTGCTTCGATTTCTTCCATTCGTTCAAATTG AAGATGATTAGTGGTTTATGTTTGATTTTGATTTTGGATTTCACTTTGTCAGGTACTGAAATAGCTATTTGTGTTTCTTC ATATTGTGATTTCAGTTCTCAACTCTCAACTATCTCCACTCAGATTTCGTTTTCAACTTGTGATTTCAGTTTCTTCTCCT CTCAGATTTGGATTGAAGGTAGGCGTTCTCATCTTGCGATTTTAGTTTTTTGATTTAGGGAAATCCTTCAATGGAATCAA TCTCTGACATCAATGCAGAGCTTTTTAATTTTCCTATTTTTCTATTTGATATTTGATATTTAACCGTGAAAATTGATATT TTAATTGATTCTACTGCTAGTCATAGGATACTTACTGATTCAATTGTGTTTTTAGTGATGATTGATGCTTCATCTTGATT TTCAAATTGCTTGTGTTGTGCATGATGAAGTGGCTCATGAATCTAAGTCACAGGTTGCGCATTGGTTTTCATAAAGTTTC ATTCAGAACTCTTTCATACCATCTATGATTTCCAATTTTCCATTCACATGCAATTATGTAATTCATGATGGTCAATTGGT CATATTAGGTGCAAGTGTCTACACGGACAACATGACTTATGCCATTATGTGTCTGTATGCGTCCCTATGTTAAACTAGTT GTTATCCAATTTTAAAGCTAGTAACCATAAACTCTGTTCATTTATGTTTCCTTAGACTGATGGTGTTCATTTATGCAATC TGCTGGCATCACATTGGCTGAAGGGAATGCCATGAAATCAGAATTGCAGGAGAGCAATGCAAGATTTCAAGCTTTTGAGG AACGAATGAATTCTTTCATTCTGCAGTTTGGAGGTCAAATGCCATCTAACCAGGTGAATTATAACACCATTCCTTTATAG AATTTAGGATTGCATTTTAATGATTCTGAGTATACTCTAGCTTTGGCCCTTTTTTATAAGGTACATTTTGTTTGGTGCTA TTTAGTATTTTCTGCTGGACTCCTTAAAGTGTTTGCCACCTAACTAGAATCGTTAATGTCATCACAGCTGGTTTGGATGT ATCTTTTATGATGTGCTAGTATTCCTCTTGTAATCTGAAATGCTTTATCATAATTCAGAATGTATTTATTAAATTATTTG AGTTGGATTGCAAGGAAAGGAATGTGTTTGTTTAGATTACTTTTACATGTGGCTCTGTTCAGAATTCAGATTGATTGTTC ATTGTTCAGATAAATGAATTTTCTTTTACCGAGGCTGCTTCGCTTATTTGCTGTCACACTAGTAGTTTTTGTCCTTCCTT GTGTGTGGCATCAGCAGTCAGCAATGTCAAGTAATTCTCAACCATTCCATCAATTAACTATTAATTACTCTGTCCTGACT AGTTTTGCTTTGCATTTGAGAAATTGTAAGCAATTTGAAATCAACATTTTTCACATCTGTATGGTTTTAGTTCTGTTTAG CAGTGATTTTAACATGCTGCTTCTTTGGTTTTTTTTGCTTGCAATAGGCACGAGATGCTTATTGTAGTGGTGAGCCTTTG ATAGTTTTGTTTGATAGAGTGAGGGCACCTTCCATTTTCATTGTATAACATGGATAATTTTAACATATGTAGTGTATAAT TCCTTGGTTTTTGATGTAAACCATCTTTCATGTGATTGAAATCAATACAGTTAAAGCTAAGATGGTTAGGTTCAAAGTCA GTTGTCAAGTATCCTCGATGTAGTATCAGGTCCAAGCTTATGCCTTATTTGATTCAATGTAATTAAATAGAAAATAATTT AAAAATCACGGTAGAACTTTGCGGCGGTTAGAAACCGCTGCAAAACAGAGGCGGAATGAATTACAGACTCTGCGGCGCTT TTAACCGCCGCTATATTATGCGGCGGTTATTCCAACGCTTGGATATAAGCGCCGCAGAACGGCCCCCGACGCTCGTAACT GCGGCGCTTAAGGAAACGCCTCATTATACATTTTGCGGCGGTTTTAACCGCCGCAAAATGCTTCCAGAGGCGCCGCAAAT TGCCTTTTTTTTTGTAGTGAATCACTTTATAATAGTCAAATTCTTCTTGTAGCATGTTTGGTTTGATGGTTTCACTGCTT GCACATGAATCATGATTGAATGCATATTTAATCAGAAGCGGTAGCTTACAACCAAAATTGATTCTAGAGTATTTCACTAT GAAACCAAACATGTTATTAATCATAGATGCCCTAGACTGCTTTACTTGTCATTTCATTTTCCCAAGTGATGCGTGTGTAA ACCCTTGATTGACTAGGGTATAAGAAGAATTATTCTAGTATAATAAATAGAATTTTTTTATGGAATCTCAGCATTTGACA ACTACTACCAAATTATATTCCTTTCCGCGTTTAACAAACATCAATTTTGGGGCCTACATGTTAATTAAAGTCAGATTAAT ATGCTCACATTTTTTTTTTATTCATTTCGGGGCCGAAGCCCAAACACTAATCCCTTACATGAAGGGTGTTACAAGAGTCA TAAAAGACTGGAACAATACAAAACGCTGGCAAAGTATTAAACACAACTAGAGAAACAGGTAAACCGAAACCATTCTTAGC CAGGGAATCAGCAACCCCATTAGCTTCCCGATAGATAGGACGAAGCACAACAATATGCTCACACTTTATTACTTTATTTT GAATAAATTCACATTCCATTGCTTTAAATAAAAGTGTTACTTTTTTTATCACATTCCTTGGCTTTTCAAAATTGAACTTA CCATATGGCACATGCATACAGGCAAGGGCTTATGCAAGAGCAATGAAGGCAGCCCTTTTCTTTTCCAGTGCAACCCACAA TATCAATGTCAACAAAATTTTCAAGTTCATCATGGCCAAGCTCTTTAACTTGCCATGGACGGTAGAAAGAAATTTGACTT TGGGAGAACCCATAATTGACTTCTGAAATGTTCACAATTTGATTCCTATGTACATAGCAGAACAGAGGATATAAGAGAAG AAAAACACAGAAGAAAGAAACCAAATTGAACTTTTCATGTTGATTGAGATCTAGGCAGTATACTGTAGGTAACTTTAAGT GTTTTTCAATAGGCCATTTTGACTATACATCTTACAGAGCTACTTGTGAAGGTGGGACTCAGTTTTCTTTAGCTGCAGTT ACTGAGTAAATTGATTCTACATTC
CDS sequence (LotjaGi1g1v0035600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGATCTCACTAGTCGTTGCACACTTCACAGTGTTGTTAGATGGTATAGTGAAGCAAGAAAGTGGAATCAGAATGC AATTCCCATTCTGATAGGAACCAAGTTTGATGATTTTGTTAAACTCACCCCAGATTTGCAATGGACCATTGTAACACAGG CAAGGGCTTATGCAAGAGCAATGAAGGCAGCCCTTTTCTTTTCCAGTGCAACCCACAATATCAATGTCAACAAAATTTTC AAGTTCATCATGGCCAAGCTCTTTAACTTGCCATGGACGGTAGAAAGAAATTTGACTTTGGGAGAACCCATAATTGACTT CTGA
Protein sequence (LotjaGi1g1v0035600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFDLTSRCTLHSVVRWYSEARKWNQNAIPILIGTKFDDFVKLTPDLQWTIVTQARAYARAMKAALFFSSATHNINVNKIF KFIMAKLFNLPWTVERNLTLGEPIIDF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 97 | 97 | 3.0E-12 | – | |
| PANTHER | 1 | 98 | 98 | 1.2E-37 | – | |
| PANTHER | 1 | 98 | 98 | 1.2E-37 | – | |
| Pfam | 1 | 87 | 87 | 1.0E-7 | ||
| SUPERFAMILY | 1 | 98 | 98 | 1.35E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi1g1v0035600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…