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LotjaGi1g1v0044100.1

Overview

Field Value
Gene ID LotjaGi1g1v0044100
Transcript ID LotjaGi1g1v0044100.1
Lotus japonicus genome version Gifu v1.2
Description 4-hydroxyphenylpyruvate dioxygenase; TAIR: AT1G06570.1 4-hydroxyphenylpyruvate dioxygenase; Swiss-Prot: sp|P93836|HPPD_ARATH 4-hydroxyphenylpyruvate dioxygenase; TrEMBL-Plants: tr|A0A0L9UUC5|A0A0L9UUC5_PHAAN 4-hydroxyphenylpyruvate dioxygenase; Found in the gene: LotjaGi1g1v0044100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:5981146..5984481) extracted from Lotus japonicus Gifu genome v1.2.

GCCCCATTTGATCCTAGTTAGTTCCGTCCTTCAAAAAATGGCATGTGAGTCCACCCAACATTTTTATCGTATTATCACCA TTTTGTCGTCCACTCCATTCTTATCGTATTAATGCCCAACTCACTCTCACTCTCATCCTCATGCATGCATGTTACATGTA CTTCATCTTCAATTTCAACCCGCAACTTCACGCCGCCACTTTCATCACCATCCTCCAATCACACCCCGCCACGTGTCACT CCGCCGCCACTTCTCCTACATAACACCACCACCACCCCACCATCCGAAACCCAACACTCACTCCATCATGGGTAAACAAA CAACAACTACTGAAGAAGTCCAAACCGGGTTCAAACTCCTCGGGTTCAACCGCTTCGTCCGGTCCAACCCAAAATCAGAC CGGTTCGCCGTGAAAAGGTTCCACCACATCGAGTTCTGGTGCTCCGACGCCACCAACGCCGCACGCCGCTTCTCCTGGGG CCTCGGCATGCCGCTCGTCGCAAAATCAGACCTCTCCACCGGAAACCACTCTCACGCCTCCTACCTCCTCCGCTCCGGCG ACCTCTGCTTCCTCTTCTCCGCCCCATACTCTCCCAAAATCTCCCTCCCCTCCACCGCCTCCATCCCCACTTTCTCCGCC TCCACCTGCTTCGCCTTCTCCGCCGCCCACGGCCTCGCCGTCCGCGCCGTCGCCGTCGAAGTCGCCGACGCCGTCCAAGC CTTCTCCGCCTCAATCAACCACGGCGCCATCCCCGTATCCCCCCCTGTCCTCCTCGACAACCGCATGAAGCTCGCCGAGG TTCAACTCTACGGCGACGTCGTCCTCCGCTACGTCAGCTACAACGACCCGACCCGTGTGTCCGACCCGGACCCGACAAAC TGGTTCCTCCCCGGGTTCGAGCCTGTAGAGGAGGCCTCGCCGGTGTTGGACTACGGGATCCGGCGACTCGACCACGCCGT CGGGAACGTGCCGAAGCTGGCTCCGGCGTTGAGCTACGTCAAGGGGTTTACTGGGTTTCACGAGTTCGCTGAGTTCACTG CAGAGGATGTTGGAACGAGTGAGAGCGGGTTGAACTCGGTGGTTTTGGCGAACAACGATGAAACGGTGCTGCTTCCGATG AACGAACCGGTTTATGGGACGAAGAGGAAGAGCCAGATAGAGACGTATTTGGAGCACAATGAAGGTGCTGGGTTGCAGCA CTTGGCTCTGGTGAGTCGTGATATCTTCATGACTTTGAGGGAGATGAGGAAGAGAAGTGGGGTTGGTGGGTTTGAGTTCA TGCCTTCTCCTCCACCTACATACTATAAGAATCTCAAGAACCGAGTTGGGGATGTGTTGAGTGATGATCAGATTAAGCAG TGTGAGGAGCTTGGGATTCTGGTGGATAGGGATGATCAGGGTACTCTGCTTCAGATTTTCACTAAGCCTGTTGGAGATAG GTGAGCTTTTCATTTACATTGTTTTCTTCTTAATTTGTTCATGTTACTTCTGATTTAGTATGTTGGCTTAACATCTTAAT TAAGCACTTATGTCATAACCTTTTAGGATAGCTTATGAAAAAGAGCTTATGCTTATATATAGTTTATTTTTCAATTTTTC AATACAAAATTTAAAATAGCTTATAAATAAGCGCTTATGACCATAAGCGCTTAATTAAGCTGTGTTTCCAAACGGGGCCC TAGGCCTCGTTTTAAGCTTATTTCACAAACTTTTTGAACTAAATTAACAATTTACCTTATATGTAGCTATAAGTGCTTTT TCATAAGTTAAGCTAAGCAGGTTAAGAAAATAAGCTCAAAACAGATTATAGGTAGATCATAAACTATTTTGACAAGTTTA CTTAAATATTTCCATAAGTGCTTATACTATAAGATTAACTTGAAGAAATTCTTTCATATGCAGCCTTATTCGACCACCTT GACTTAATTATTAGCTAATAATGTTTACAGCTTGATTCACAATTTAACATTTCACTACATGATTTTTGAAAGATTAGTTT CTCAGAGTTTTGCTTATATAGGAGAAAATAAGGGGAATTTATGTTGTGGAGTAGTTTGGTTATTAACATACCATGTAGGG TTGATTGAATTAGGCATAATCTACTGGTGTGATCCTTTTGTGTCTTGTAAGTTGTCAAAATGCTCCTTGATTCTCGTTTA CAATAGTAATGGACACCACCCTTAACAGTTAATCAGAGAAATGAATCAATGAGGAGTGAAGGATAAAGTGAGAAATTAGA TTTACCATTTTCATCAAAACTAGAACATTAGAGTTAGCATGCTTGTTTTTCAGTCAAGTTTAGTTTCTCTTTACTCGTTA AGCAAAAAGTAAGTCTCTTTTCCTTCTTCTAAACAGAAATTTTTCCTGTTTTCTGTCAAGCTAATCGGAAACAAAAACAA GTGTTTGTCTATTTTTTTGGTCTCATCTTCCTTTTCTGGTTGTTTGTTCATTATCAATTTTGCAAGTGTGTTGAGTATTT GAGCCTCTTGCCTTGTGTGTTTGGGTATGAAGATTTGTCAAATATGGATGGTGCTGATTGGTTCTTGTGTTAAATGGACA GGCCAACCATATTTATTGAGATAATCCAGAGAGTTGGATGCATGGTGAAGGATGAGGAAGGGAAGGAATACCAAAAGGGT GGGTGTGGAGGGTTTGGTAAAGGCAATTTCTCTGAGCTCTTCAAGTCCATTGAAGAATATGAGAAGACTTTGGAAGCTAG AAGAACTACATGACCCAAAAGAATATGTGATCTCAATGCACTGTAATGTGGTGCTTTCTAGGCCATCTAGTTATCACTGC AATGCTGATATTTGTTGGTCTTCTCTTCATTACTTTTACTAAGTGGAGGTAGTAGCTGGAGCTCTTCCACAAAGGAATTG ATGGTGCCTATAGTCTTTATCTTGTATAATAATAGATAATAAAATTGGAAGCACAGCCTTTACAAAAGATCAAACAAACT TTGTCAGATATTTTTCTGTCAGATACTCTTAAATGGGAACGGAAATATACTTATGTTAGATAGTGTATCACAATTCAAAT ACATTTGCATAGGTGCATGTAAATGCTAAGAAAAAAAATAGGGGAACTTTCAGCACAAGTTCTTTTTGAATGTTATATTC CAGAGCTTCCCACTGTTGCAACATCTAAACTTGCCATTTGCCAACCAGATAAACAGAGTATATGATATTAGGTTGGTGTC ATGCTATCTAACATTTGAATTTGATTTTTGTTTTTCAAATATATGTTGAATAATCACCTATACTACAATAAGTAATAATA ACATCATAAAAGGAAAATTGTCGTGTTGTGAGGAACAAAGAGTAGGGTACGTGCCA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0044100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTACATGTACTTCATCTTCAATTTCAACCCGCAACTTCACGCCGCCACTTTCATCACCATCCTCCAATCACACCCCG CCACGTGTCACTCCGCCGCCACTTCTCCTACATAACACCACCACCACCCCACCATCCGAAACCCAACACTCACTCCATCA TGGGTAAACAAACAACAACTACTGAAGAAGTCCAAACCGGGTTCAAACTCCTCGGGTTCAACCGCTTCGTCCGGTCCAAC CCAAAATCAGACCGGTTCGCCGTGAAAAGGTTCCACCACATCGAGTTCTGGTGCTCCGACGCCACCAACGCCGCACGCCG CTTCTCCTGGGGCCTCGGCATGCCGCTCGTCGCAAAATCAGACCTCTCCACCGGAAACCACTCTCACGCCTCCTACCTCC TCCGCTCCGGCGACCTCTGCTTCCTCTTCTCCGCCCCATACTCTCCCAAAATCTCCCTCCCCTCCACCGCCTCCATCCCC ACTTTCTCCGCCTCCACCTGCTTCGCCTTCTCCGCCGCCCACGGCCTCGCCGTCCGCGCCGTCGCCGTCGAAGTCGCCGA CGCCGTCCAAGCCTTCTCCGCCTCAATCAACCACGGCGCCATCCCCGTATCCCCCCCTGTCCTCCTCGACAACCGCATGA AGCTCGCCGAGGTTCAACTCTACGGCGACGTCGTCCTCCGCTACGTCAGCTACAACGACCCGACCCGTGTGTCCGACCCG GACCCGACAAACTGGTTCCTCCCCGGGTTCGAGCCTGTAGAGGAGGCCTCGCCGGTGTTGGACTACGGGATCCGGCGACT CGACCACGCCGTCGGGAACGTGCCGAAGCTGGCTCCGGCGTTGAGCTACGTCAAGGGGTTTACTGGGTTTCACGAGTTCG CTGAGTTCACTGCAGAGGATGTTGGAACGAGTGAGAGCGGGTTGAACTCGGTGGTTTTGGCGAACAACGATGAAACGGTG CTGCTTCCGATGAACGAACCGGTTTATGGGACGAAGAGGAAGAGCCAGATAGAGACGTATTTGGAGCACAATGAAGGTGC TGGGTTGCAGCACTTGGCTCTGGTGAGTCGTGATATCTTCATGACTTTGAGGGAGATGAGGAAGAGAAGTGGGGTTGGTG GGTTTGAGTTCATGCCTTCTCCTCCACCTACATACTATAAGAATCTCAAGAACCGAGTTGGGGATGTGTTGAGTGATGAT CAGATTAAGCAGTGTGAGGAGCTTGGGATTCTGGTGGATAGGGATGATCAGGGTACTCTGCTTCAGATTTTCACTAAGCC TGTTGGAGATAGGCCAACCATATTTATTGAGATAATCCAGAGAGTTGGATGCATGGTGAAGGATGAGGAAGGGAAGGAAT ACCAAAAGGGTGGGTGTGGAGGGTTTGGTAAAGGCAATTTCTCTGAGCTCTTCAAGTCCATTGAAGAATATGAGAAGACT TTGGAAGCTAGAAGAACTACATGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0044100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLHVLHLQFQPATSRRHFHHHPPITPRHVSLRRHFSYITPPPPHHPKPNTHSIMGKQTTTTEEVQTGFKLLGFNRFVRSN PKSDRFAVKRFHHIEFWCSDATNAARRFSWGLGMPLVAKSDLSTGNHSHASYLLRSGDLCFLFSAPYSPKISLPSTASIP TFSASTCFAFSAAHGLAVRAVAVEVADAVQAFSASINHGAIPVSPPVLLDNRMKLAEVQLYGDVVLRYVSYNDPTRVSDP DPTNWFLPGFEPVEEASPVLDYGIRRLDHAVGNVPKLAPALSYVKGFTGFHEFAEFTAEDVGTSESGLNSVVLANNDETV LLPMNEPVYGTKRKSQIETYLEHNEGAGLQHLALVSRDIFMTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRVGDVLSDD QIKQCEELGILVDRDDQGTLLQIFTKPVGDRPTIFIEIIQRVGCMVKDEEGKEYQKGGCGGFGKGNFSELFKSIEEYEKT LEARRTT
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11959:SF1
63 482 420 9.7E-188 –
PANTHER
PTHR11959
63 482 420 9.7E-188
IPR005956
Gene3D
G3DSA:3.10.180.10
66 261 196 2.0E-59
IPR029068
SUPERFAMILY
SSF54593
81 471 391 1.01E-89
IPR029068
ProSiteProfiles
PS51819
90 252 163 15.847
IPR037523
TIGRFAM
TIGR01263
90 482 393 2.9E-111
IPR005956
CDD
cd08342
91 252 162 1.35029E-30
IPR041736
Gene3D
G3DSA:3.10.180.10
262 485 224 2.3E-85
IPR029068
CDD
cd07250
264 476 213 3.90077E-85
IPR041735
Pfam
PF00903
266 422 157 1.1E-4
IPR004360
ProSiteProfiles
PS51819
266 426 161 17.704
IPR037523

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003868
Molecular function 4-hydroxyphenylpyruvate dioxygenase activity Catalysis of the reaction: 4-hydroxyphenylpyruvate + O2 = homogentisate + CO2.
Subterm of
GO:0009072
Biological process Aromatic amino acid family metabolic process The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
Subterm of
GO:0016701
Molecular function Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and molecular oxygen is incorporated into a donor.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0044100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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