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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0058200 |
| Transcript ID | LotjaGi1g1v0058200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein, putative; TAIR: AT1G06620.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1; TrEMBL-Plants: tr|A0A151R3P6|A0A151R3P6_CAJCA 1-aminocyclopropane-1-carboxylate oxidase isogeny 1; Found in the gene: LotjaGi1g1v0058200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:8132337..8135596) extracted from Lotus japonicus Gifu genome v1.2.
ATTAAAGAGGATGGAGCATTTTCAAAGAATAGTCCAAGTGGATCCAACACTCTACCTGCCTAATCCTTGATCCCATCTGA ATTGACTCTTCATAGTTGCTTTTGTTGCAGAAATGAGGAGCACCTAATGAAGTCTCTCAACATGGTGGTCACAAGCACAG ATGAGTTGGAGGCTGCAGCAACAGTTTCCAGTGATTATGACAGGAAAAGTGAGCTCAAGGCATTTGATGATTCAAAGGCT GGTGTCCAAGGACTAATAGAAAATGGAATCACAAAAGTTCCACGCATGTTCTATTGTGTACAATCACCTAATGATCTCAG TGATGTTGTTGGCTTAACCAGTAGTGCTGATTCTAATTCAAAGTTAAGTATTCCCACAGTAGACCTCACAGGGATCCATG ATGGTGATCATGTTTTGAGAGATGAAGTTGTTGGGAGAGTTCGGCATGCGTGTGAGAAGTGGGGCATCTTTCAGGTTACA AATCATGGGATTCCAACTCATGTTTTGGATGAGATGATCCAAGGAACGTGCAGGTTTCACCAACAAGATGCCAAGGTGAG AAAAGAATACTACACCCGTGATTTCAGCAGGAAAGTTGCTTACTTTTCCAATCCTTTTCTTTACAATGAGCCATCTGCTA TTTGGAGTGATACACTTTCATGTGTCTGTGCACCTCATCCACCCAAAGCTGAAGAGCTGCCACCAGTTTGTAGGTTTGTG CTAATACTACTCCTAACATTTGCCCTTTATTTCTCATGAGACTTTAACTTAATTAACAAGGATGGATGACTGATTTCCAA TAATAATTTTCTAATTGATCATGATATCTATTCAAAACTTAAATTTGGGTTATGAGAATATTGTAAGGCTCTTGTAGATG GCTTATGATGATATCTATTCAAACATATCTTGCTTTGGTAGGTAGCTCTGAGCCTCTGGCTATTTGATTTCAGGGGAAAA TACACATCCCAGCACATAAATGAAGATGCAAGATTTTGCCAGGATTTCTACGTTGATCAATGTTTAGTTTAATGAAATTC CAAACTTGCACTTGATGTTTTTACCTTTAATTGAAGAAAATATTCATTAGATTTAGTCATAGAGATATGATATCTTTATT ACAATTTTTTAGTTCCCTTATAGTTAGACCCCCTAAAACTGTCTTTGATGAGTTGATAACATATTGCAGAGAGGTTGTGA TTGAATACTCAAAGGAAGTAATGGCTCTTGCTTCTGATTTATTGGAGCTATTGTCAGAGGCTCTTGGCATTAATCGTTTT CACCTTAAAGAAATGGGTTGTGCTGAAGGGATGTCTCTTTTATGTCACTATTACCCACCATGCCCTGAGCCAGAATTAAC TCTAGGCACTTTCAAGCACTCAGATTCAAGCTTCATGACAATACTCTTGCAACATCAGATTGGTGGCCTTCAAGTTCTTC ATGATAATCAATGGATTGATGTACCTCCCATGAAAGGAGTTCTTATAGTGAACATTGGGGCTCTTCTGCAGGTGAGTTCA TCATGCATAAAAATAGCATTTCCATTAGAGTGAAAAAAATTGTTGTGTATTTGTGCGTTAGCTTGAAATGGCTAACACTC ACTTTGACAAAAAAATGAACAGAACGGATTGAGATGAAAGTTAATTCATGTTGCATTCAATCGGTATCAAAACACACATT AGTTGTGTTGGAATTATAGGGTATAAATATTAGATAGGAGGAAGGGAGTGAAATCAATGCTCAAAAGAATTCTTTATTAG ATTGATATGATGTGTGTTATAAGTCTCGCATTGCCTAGAGATATAGTCAACTAAGTGTTTATATAAGGTAGGATAATCCT CACCCCTCAGCTAACTTTTTGAGTAGAGTTAGTGTTGGGTTGCAAGAGTATAAATCGAGGGATCATCCACATTGGGCTAA CATGAGAAAATTTTAAGTGGATTTGACATCACATCTTTAATCCAAAACCTTAAGGCATTAGATGTATGAGTCCTCTCACT TATAAAGTGTTTATTACTCCTCTAATCTTCCAATGTGGGCCTTCTTTACTCACACTTGCCATCCCAACAATCTCCCCCTC AAGTGTGAGTCAATCTCAAGCGGAAGCCTCCAATCACTTGCACCGTCGTTGGATCTACATCAACTGGACACGCCGCCTAG CCACCATTGCTAGGAAGACTTTCGACACAATGAGTCATCATCATGGTCGCACTAATCATCGGCTCTGAAACTAGAGTTGG GCCGCAAGAGAATAAACTGGGAGATCATCCAGATTGGACTAACATGAGAAAATTATAAGTGGATTGGACACCACATTTTT CACCAAAAACCTTAAGACATTAGGTGTATGAGTCTTCTCACTTATAAAGTGCTCATTACTCTCTTAATCTTCCAATGTGA GACTTCTTTACTCACACTTGACATCCTAACACTGAGGTCTACCCAAAAAGAGTAATGATTCTGTTGTCATAGGTTACACA TTGTGATTTAAACAAAACAATTTATTTTACTAATTCCTTAAATTCTAAGTGCTTATGAGAAGCTAGAGCCTCCACTCGGT TTATCCCTACTTATCATTTCCCTTTTTAGCCTAATAAATGTAGCAAAGTTTATATCCATGTCAAATAAGAATTGATTATG AATTTATGATCAGTTTCACTGTTTTTCTTTGCAGCTTGTGAGTAATGACAAATTCATTGGTGTTGAGCACAGAGTTTTAG CAAATCATATAGGTCCTAGAATTTCAGTTGCATGTAGTTTTAGATCACGTACACCTGAGGGCATGTCAAAAGTCATCGGT CCAATCAAGGAACTGGTATCTGAAGAGAGTCCACCAATATACAAGGAAACTTCTATAAAAGAGTTCTTGACACATCGTAC TGCAAATAGCATTGAAGCTTCCTCACTACAACCCTTCAAGTTGTGAGTTGTGAACAGATGCATATATACAATCTTGATTT CTTATTGTTGTTGGAATCAGCTGTGGTTTATCTTATTTTGTGGAACTATGCTTTGTGCTTTCTTTGAACAATGCATTTGT TTGGGCTTTGGACTGTAGAAAATATTTAAGCATCTTGGTTTTAAAATTTGAAGACCCCACACGTATATAAAATATCAAAA TAACACTTGGAAGAAGCTTTATGAGAAGCATGTTCGGATTAGTTTCTCTTAAAAAATAATTGTGAATCCCACAAACTCTT ATCAATAAAATCTTTTTTCTCAGAATTTAAAACAAGTAAAACTACCAACAGAAGTATCCC
CDS sequence (LotjaGi1g1v0058200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTCTCTCAACATGGTGGTCACAAGCACAGATGAGTTGGAGGCTGCAGCAACAGTTTCCAGTGATTATGACAGGAA AAGTGAGCTCAAGGCATTTGATGATTCAAAGGCTGGTGTCCAAGGACTAATAGAAAATGGAATCACAAAAGTTCCACGCA TGTTCTATTGTGTACAATCACCTAATGATCTCAGTGATGTTGTTGGCTTAACCAGTAGTGCTGATTCTAATTCAAAGTTA AGTATTCCCACAGTAGACCTCACAGGGATCCATGATGGTGATCATGTTTTGAGAGATGAAGTTGTTGGGAGAGTTCGGCA TGCGTGTGAGAAGTGGGGCATCTTTCAGGTTACAAATCATGGGATTCCAACTCATGTTTTGGATGAGATGATCCAAGGAA CGTGCAGGTTTCACCAACAAGATGCCAAGGTGAGAAAAGAATACTACACCCGTGATTTCAGCAGGAAAGTTGCTTACTTT TCCAATCCTTTTCTTTACAATGAGCCATCTGCTATTTGGAGTGATACACTTTCATGTGTCTGTGCACCTCATCCACCCAA AGCTGAAGAGCTGCCACCAGTTTGTAGAGAGGTTGTGATTGAATACTCAAAGGAAGTAATGGCTCTTGCTTCTGATTTAT TGGAGCTATTGTCAGAGGCTCTTGGCATTAATCGTTTTCACCTTAAAGAAATGGGTTGTGCTGAAGGGATGTCTCTTTTA TGTCACTATTACCCACCATGCCCTGAGCCAGAATTAACTCTAGGCACTTTCAAGCACTCAGATTCAAGCTTCATGACAAT ACTCTTGCAACATCAGATTGGTGGCCTTCAAGTTCTTCATGATAATCAATGGATTGATGTACCTCCCATGAAAGGAGTTC TTATAGTGAACATTGGGGCTCTTCTGCAGCTTGTGAGTAATGACAAATTCATTGGTGTTGAGCACAGAGTTTTAGCAAAT CATATAGGTCCTAGAATTTCAGTTGCATGTAGTTTTAGATCACGTACACCTGAGGGCATGTCAAAAGTCATCGGTCCAAT CAAGGAACTGGTATCTGAAGAGAGTCCACCAATATACAAGGAAACTTCTATAAAAGAGTTCTTGACACATCGTACTGCAA ATAGCATTGAAGCTTCCTCACTACAACCCTTCAAGTTGTGA
Protein sequence (LotjaGi1g1v0058200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKSLNMVVTSTDELEAAATVSSDYDRKSELKAFDDSKAGVQGLIENGITKVPRMFYCVQSPNDLSDVVGLTSSADSNSKL SIPTVDLTGIHDGDHVLRDEVVGRVRHACEKWGIFQVTNHGIPTHVLDEMIQGTCRFHQQDAKVRKEYYTRDFSRKVAYF SNPFLYNEPSAIWSDTLSCVCAPHPPKAEELPPVCREVVIEYSKEVMALASDLLELLSEALGINRFHLKEMGCAEGMSLL CHYYPPCPEPELTLGTFKHSDSSFMTILLQHQIGGLQVLHDNQWIDVPPMKGVLIVNIGALLQLVSNDKFIGVEHRVLAN HIGPRISVACSFRSRTPEGMSKVIGPIKELVSEESPPIYKETSIKEFLTHRTANSIEASSLQPFKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 21 | 371 | 351 | 2.7E-105 | – | |
| PANTHER | 21 | 371 | 351 | 2.7E-105 | – | |
| Gene3D | 30 | 370 | 341 | 2.7E-97 | ||
| SUPERFAMILY | 37 | 374 | 338 | 2.2E-86 | – | |
| Pfam | 82 | 181 | 100 | 7.2E-14 | ||
| ProSiteProfiles | 235 | 336 | 102 | 13.728 | ||
| Pfam | 239 | 331 | 93 | 8.0E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0058200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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