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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0068400 |
| Transcript ID | LotjaGi1g1v0068400.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Centromere/kinetochore protein zw10 like; TAIR: AT2G32900.1 centromere/kinetochore protein, putative (ZW10); Swiss-Prot: sp|O48626|ZW10_ARATH Centromere/kinetochore protein zw10 homolog; TrEMBL-Plants: tr|K7KAZ4|K7KAZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0068400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:9451955..9457565) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGTCTCTCTTCGGCGCAATCAACGTCCGAGACCTTCTCTCTACACAAGACCTCTCCGACCGGAACTCCCCACTCTC CGCACCAGATCTCCGCCTCCTGATCGAGCGCGTGGAGTCCCACTCCCACCAGATCCGATCACAGGTGCATTCCTACCTCG ATTCCCACCGTGAAGATTTCGAATCCCTCTTCTCCCTCTGCAACGACGCCGTTACGCAGACACAGCGCGTCTCCGACGAC GTCGCCGGCGTCATCAAGCTTGTCTCCGAGCGGCCACCTGATGTTGAGGTGAGGGAAGCGGTGGAGGAGATCAAGGCGAA GAGGGATGAGCTGAAGGTGAAGAGGGAGCTGTTAGGGCTTGTGGGGATTGTTGTGGGTTTGAACCAGAGGTTGGAGAGTG TGAGGGAAGGGTTGAAGAGTGGGAAGTTCCAGTTTGTGGCTCAAGGGTTGAAGGAGTTGAAGGTGGCGTTGAGAGTTGGT GATGAAGAAGATGATAGGGAGCCTTTGGTGTATGGATTGTTGAGGAAGGAATGGCTTCTGTGCTTTGAAGAGGTGCTTCA CTGTTTTCTTCTTTTGTTTTCCTTTTCCATGTTTTCTCTATGTTTTATATATTCAATGCAGTTGGTTTGTAGTTTCATGG AAATGAATGAGTTTAATGCTGTGAATATATTTGTTTATAGATTCAAATTTCAGTGCAGTTGGTTTGTAGTTTCATGGAAA TGAATGAGTTTAATGCTTTGAGTATATTTGTTTGTGGGAATTGAATTGAAGCCTTTCAGAATGTTTGTGTGAGCCAGTTT GGATAAACTTTTCAACAATCAATTGCAAAAAATGAAAAGCTGAAAAGATTTAATAATGATTATAAATCCAATAACTTTGT AAATAATCTGAATTCAACATTTGTAGCTTAATTTTTTTTTCTAAGCTTGCTTATCTAACTTATTATACACACCTGCGTTA AATCTTAGGGCATTTTGTTGGAGAACATACTTAAAATAAAGTTCTGTGATTGGAAATTTGTATTGGAATGGTTAAAAACT GATGATGAGGATTTCTGAGTTTGTTTGGGGACAGATGGAGGTTATTGGGTTCGGGGTTTGTGGATGAAAATGTGCAATTA ACAATGAGCAGATTCATGGCTTTGTTCATTATTTTTTCATGATTTTTTTCCCCATAACAGAGTCAAAGTACTGAATTATC GGGAAACAAAATGCTGAGTATCCCTACGGTTGCTTTTTCTTTCTTTACCTTTTGTGCATGAAATGACTGAACTTTCTCTT TACCATTGATCTGAAAGTTGGTGTGAAATCTTTGAGGTTTGAACTCAGTCAGTATAAATTACTAGTAAAAGTTTCAACTG TGCAGTAACCAATAATATTAATAATAGAAATTAATCATGTGGTAATAATCTATGTAGATAACTCTTAATGCATTTTCGCT GATAATTCGCTCATATTGGCTTAAATGATGATAGTTGAATAATTTTTCCTTTGACATATGCAAACAGTGTAGTCAATTCA TATGATTTGTGCCATAGAATGATAATTGGATAATTTGTGATTTTTATTGAGTTTGTGATTGTTTTTAGAGGAATTCGGTT TGGGTTTGTAGATTCAAGATGTCCTTGTGAAGTTTATGGAAAAGGCTGTCCGATTTGATAGGGGCTTGAATCAAGTTGAA GTCAAGTATAAATTAGAAGTTGATACTATGAATGGGATTCAGTTACAAGCAGTTCTGGAGGCAATGGAAGTAAGTTAATT CATCTCACGTTTTACACTTTCTGTTTGAAACATTCAATTTTATTCCTGTTTTGATGTTGATGAACTCAGTTATATGTATT TGTGCTCCCTCTAATTTATGGTGTTCTTAGGTGGTTGGTATTCTAGAATATGGGCTAGCTAAAGTTGCTGATTTGATGAT CAAGTATGTTATCACTCCTTTCTTAAATGGTGGACAACCTCTCTCATTTCTAGAGGAATCAAATCAAGAATCAGCTGTGC TAAAGATAGTTTCCTCACCAGATAGTAAGGTGAGTGCTATGTGTTATGGTCTTTGAATCAATTTATATTGCACACAGGTC GCCATCTGTTTTCTTTTATCCTTTTCGCATGGCTTATTGATCTTATTCTAAGGGAATTGGCTTCTTTAACGTGCAAAGTG ACTTCCACTTTGGAGAGAAAGTGCAGAGTTTTAACTGTCGATTGGAAAATAAAAATTTATGTTTAATAATTTAACAAATT TATGGTTAATAATTTAACAACTTTGCATTTTGCATTACAGTATCAACCTTGATTTTCTATTCAATAGTATAATTCAGCAC TTTACCATTGATTGAAGTGCATCCTAAACTCGAGAGGAGCCAAATCCTATTCTTATTCTCAATTTTTTAGTTAAGATTGT TTTGTTATTAACCTGGAAGCATTGCCATTTTGCTGCTATTTTGTTCCTAAATATCTGATTTTTTATTTGCAGCTTGAGTA TCTGGATGGGGAGTTTCTTTATTCAGGGATTCTGCATTTTATCAAATTTATTTATGGAAGTATTTGCTTCCAGAACAGTT CTTGGATGCAATGTTTTGGAAGACTGACCTGGCCAAGAATAGCAGAGCAAATAATATCTAGCTTTCTTTCAAAGGTTTGC CTTTAAGCTGTACGCCATAAGATACTTGATTAAACAAAGACTGTATCCATGCATCTTATGCTTTGAAACAAGTGTAAGAA TATTTATATACCACTGCATTGATTTTAGTTGAAATTTGATTGAATGCTGCTGTTGCTAATAATATGCTAGCTCTTGTCAT CTCTCTCATCTCAACCAACAAAAATATGATCTAGTTGAATTAGTCAGTCCTTCATGATACTACTAGCTAGGACAATTATT TGCTTGTCAGTTACAGTCTAAAAGCTACATAGAAAGTGAGTGTTTAAGTTTTGCACATAGTCACACAAGATGTCTGATTT CAGGTTGTTCCAACAGATGCATCAAAACTACCTGACTTTCAGAAGATCATCAAATGTACTTCTGAATTTGAAATGGCTTT GGAAGAGCTTATGTTCATTTCAGCATCAGATGACAAGGATAACCGGCTGAGCAAGTTTGCTGAAAATGTTGAGGTTCACT TTGCATCTAAGAAAAAAACTGAAATCTTGGCTAAAGCTAGAAGTCTCCTCCTAGAATGCGACTTTTCCATTCCTCAAGTG AGTTTTCTTACAGAGTGAGTTCTTGTGTTGCTATCATGATATTTTATTATTGATAAAGAATGTCACTGCAGGAGTATACT AGGGATAGTTCTGTTTGGAAGAATGATGAAACTTCTATCCAGTCATCCAGTCATGTGGTAGATTTGCTTTTCTTATCAGA GAGGTGTTTGGTATCCAAAGCAGCCAAGCAATTGATGGTGCTAATTCACCAGACACTGCAGGTATACAATCTAGAATAAT GAATAATATACAAATGGCATATGTGCATCACATTATATTTGAAGTACAAGCTCAAGAGTTTATTATGCATCTGTTTTTCA ATCCCTTGATTTATACTTTTTACTGCACAAATTATTTTCTATAGAGGACATTCTCAAAATTCTTTTTTGTTTGTTTATTT GTGCAGGATGTTTGCTTGTCATCTACTAGAGTCGCTTTGGAATTTTATCGTGCAGCTAGAGATGCTATACTTCTTTATGA AGTAGTTGTCCCTATCAAGGTTAGTCCATGTAAGGCAGTGGAAAAGTGGAAAAGCCTTTTATGCTACATTTTAGTTTTTC TTTCATTAAGGGTTGATTTAATAGGGTGAACATAATGAAGTAACATGAGTTTATTGCCAACATCAAAGCTATATATTCTT GAACCATTTCCTGTGTGCTATTATTTATACCTTTTTCTGATCTTTGGCTGAGATGAGCCATCAATGGCATTCATATTAAA ATATGTGGAGAATTTATCTTCATTATGAAGTTATTATCCATGTCAAGGTTATTATTGGTCTATGTTTATACTTTTTGTCT AAAATAACAACTTCTGTTTTTGACTTGTGAAGCTAGAGAGGCAGCTTAATGGCATCAATCAAGTAGCTGTTCTGATGCAT AATGACTGTCTTTATCTTTCCCGAGAGATACCTGGGTTTGCATTTGAGGTATACATACTTGAATGACTAAGCATGAAAAT TCTTACTATTTAAATAATTTACTTTTGTCAACAAAAGTCTTCTTTTCTTCCTGGTGCCTTCTTTATCATAGTATTTTTAC TTAAGTTCTATTGAGCTCAACTCAAAGACTCAATTTGATAATTTATTTTATCAAAAGAAGTCAAGTGTTTGATGTAAACA TTGTTTATTTTCATTAAATAATGCATTTTTTTTCTTGGGCTCATGCATTTGGCCACTCTTGTCTCAGTATCGAACAGATT TTCCAAGTTCAATTAAGGAGCATGCGGTGTTTGTTGATTTGGCTCCTAGATTTCAGCTTTTGGCAGAAGAAATACTGCAG AGACAAGTTCACCTTGTTATTCTTAACTTGAATGAGGTACTGCCTTGTTGAAATGCATGCTGCATCTGTAGGATATCAAT TAGTTATGGTTGACACTTGCCTTATTGACCTGGTACTTTTCCACCTCTGCCCTTTTTTATAGGCTATTGATGGTGCTGAT GGATTTCAGAATACTCATCAGATGCAGCAATTTGAGTCGACTAAATTTAGCATAGACCAGGTAATTTTCTTGTTAATACG ATTTGTGTACATTACCATTTGTTTTCCCATAGTGCTTTATCTCTTTTTTCTTTTTTTCTTTTCTGCCTGCATGCAAGCGA CCAACTTGGGTGCCTTCTAGTTTCACAAATGACATGAAGCTGAGTTTGCTTGATCAGGTTGTTTTCATTCTAGGAAAAGT ACATATCATATGGGAGCCACTTTTGCTGCCATCAACTTACAAGAAAAGCATGTGTACAGTCTTAGAATCAGTTTTCTCAA GAATTGCAAGAGATATACTTCTCTTAGATGACATAGCTGCAGACGAGACTTTACAGGTAGGGTCCATATCATGACTCAAC TTATCAATGCTTGTAATTTTACCATCCTATTTTAGAAGTTGGTGTAATATTTTACACTCATTTCCAGCTACAAAGACTTA TCCAGTTAATGCTGGAAAGCCTATCATTTTTATTCGAATCATTGGCCACTGGGGTTCAAAATTCACATGAATTCTCGATG GAGTCTCTTGAAGATCTTATCCCATCTATGCGTAAAATCCGCAAACTATCAGGCATGTTGCGTTATCTACTTAAGCATTT CTTTAGAAGCTGTCGGTTGGGTTATAATTTACTCATCTACTAACTACTATATGTTCATCTTTCACAGAATTATTAGATAT GCCTTTAAAATCTATTACAGCATCTTGGGAGGATAAAGAGTTGTTCTCTTGTGGGTTTACAATAACTGAGGTATTATTTG ATTATTGATGACTTCATTTCTCGGGGCAATGTATTTTACTCCCCACTTGTTATGTTTCTTACCTATCTTTTATTGACCTC TTTGCAGGTGGAAGATTTCATAAAAGCTATATTTACAGACTCACCTTTAAGAAAAGATTGTTTATGGAGGATACAAAGTA CGAGCTTTTAG
CDS sequence (LotjaGi1g1v0068400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTCTCTCTTCGGCGCAATCAACGTCCGAGACCTTCTCTCTACACAAGACCTCTCCGACCGGAACTCCCCACTCTC CGCACCAGATCTCCGCCTCCTGATCGAGCGCGTGGAGTCCCACTCCCACCAGATCCGATCACAGGTGCATTCCTACCTCG ATTCCCACCGTGAAGATTTCGAATCCCTCTTCTCCCTCTGCAACGACGCCGTTACGCAGACACAGCGCGTCTCCGACGAC GTCGCCGGCGTCATCAAGCTTGTCTCCGAGCGGCCACCTGATGTTGAGGTGAGGGAAGCGGTGGAGGAGATCAAGGCGAA GAGGGATGAGCTGAAGGTGAAGAGGGAGCTGTTAGGGCTTGTGGGGATTGTTGTGGGTTTGAACCAGAGGTTGGAGAGTG TGAGGGAAGGGTTGAAGAGTGGGAAGTTCCAGTTTGTGGCTCAAGGGTTGAAGGAGTTGAAGGTGGCGTTGAGAGTTGGT GATGAAGAAGATGATAGGGAGCCTTTGGTGTATGGATTGTTGAGGAAGGAATGGCTTCTGTGCTTTGAAGAGATTCAAGA TGTCCTTGTGAAGTTTATGGAAAAGGCTGTCCGATTTGATAGGGGCTTGAATCAAGTTGAAGTCAAGTATAAATTAGAAG TTGATACTATGAATGGGATTCAGTTACAAGCAGTTCTGGAGGCAATGGAAGTGGTTGGTATTCTAGAATATGGGCTAGCT AAAGTTGCTGATTTGATGATCAAGTATGTTATCACTCCTTTCTTAAATGGTGGACAACCTCTCTCATTTCTAGAGGAATC AAATCAAGAATCAGCTGTGCTAAAGATAGTTTCCTCACCAGATAGTAAGGTTGTTCCAACAGATGCATCAAAACTACCTG ACTTTCAGAAGATCATCAAATGTACTTCTGAATTTGAAATGGCTTTGGAAGAGCTTATGTTCATTTCAGCATCAGATGAC AAGGATAACCGGCTGAGCAAGTTTGCTGAAAATGTTGAGGTTCACTTTGCATCTAAGAAAAAAACTGAAATCTTGGCTAA AGCTAGAAGTCTCCTCCTAGAATGCGACTTTTCCATTCCTCAAGAGTATACTAGGGATAGTTCTGTTTGGAAGAATGATG AAACTTCTATCCAGTCATCCAGTCATGTGGTAGATTTGCTTTTCTTATCAGAGAGGTGTTTGGTATCCAAAGCAGCCAAG CAATTGATGGTGCTAATTCACCAGACACTGCAGGATGTTTGCTTGTCATCTACTAGAGTCGCTTTGGAATTTTATCGTGC AGCTAGAGATGCTATACTTCTTTATGAAGTAGTTGTCCCTATCAAGCTAGAGAGGCAGCTTAATGGCATCAATCAAGTAG CTGTTCTGATGCATAATGACTGTCTTTATCTTTCCCGAGAGATACCTGGGTTTGCATTTGAGTATCGAACAGATTTTCCA AGTTCAATTAAGGAGCATGCGGTGTTTGTTGATTTGGCTCCTAGATTTCAGCTTTTGGCAGAAGAAATACTGCAGAGACA AGTTCACCTTGTTATTCTTAACTTGAATGAGGCTATTGATGGTGCTGATGGATTTCAGAATACTCATCAGATGCAGCAAT TTGAGTCGACTAAATTTAGCATAGACCAGGTTGTTTTCATTCTAGGAAAAGTACATATCATATGGGAGCCACTTTTGCTG CCATCAACTTACAAGAAAAGCATGTGTACAGTCTTAGAATCAGTTTTCTCAAGAATTGCAAGAGATATACTTCTCTTAGA TGACATAGCTGCAGACGAGACTTTACAGCTACAAAGACTTATCCAGTTAATGCTGGAAAGCCTATCATTTTTATTCGAAT CATTGGCCACTGGGGTTCAAAATTCACATGAATTCTCGATGGAGTCTCTTGAAGATCTTATCCCATCTATGCGTAAAATC CGCAAACTATCAGAATTATTAGATATGCCTTTAAAATCTATTACAGCATCTTGGGAGGATAAAGAGTTGTTCTCTTGTGG GTTTACAATAACTGAGGTGGAAGATTTCATAAAAGCTATATTTACAGACTCACCTTTAAGAAAAGATTGTTTATGGAGGA TACAAAGTACGAGCTTTTAG
Protein sequence (LotjaGi1g1v0068400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESLFGAINVRDLLSTQDLSDRNSPLSAPDLRLLIERVESHSHQIRSQVHSYLDSHREDFESLFSLCNDAVTQTQRVSDD VAGVIKLVSERPPDVEVREAVEEIKAKRDELKVKRELLGLVGIVVGLNQRLESVREGLKSGKFQFVAQGLKELKVALRVG DEEDDREPLVYGLLRKEWLLCFEEIQDVLVKFMEKAVRFDRGLNQVEVKYKLEVDTMNGIQLQAVLEAMEVVGILEYGLA KVADLMIKYVITPFLNGGQPLSFLEESNQESAVLKIVSSPDSKVVPTDASKLPDFQKIIKCTSEFEMALEELMFISASDD KDNRLSKFAENVEVHFASKKKTEILAKARSLLLECDFSIPQEYTRDSSVWKNDETSIQSSSHVVDLLFLSERCLVSKAAK QLMVLIHQTLQDVCLSSTRVALEFYRAARDAILLYEVVVPIKLERQLNGINQVAVLMHNDCLYLSREIPGFAFEYRTDFP SSIKEHAVFVDLAPRFQLLAEEILQRQVHLVILNLNEAIDGADGFQNTHQMQQFESTKFSIDQVVFILGKVHIIWEPLLL PSTYKKSMCTVLESVFSRIARDILLLDDIAADETLQLQRLIQLMLESLSFLFESLATGVQNSHEFSMESLEDLIPSMRKI RKLSELLDMPLKSITASWEDKELFSCGFTITEVEDFIKAIFTDSPLRKDCLWRIQSTSF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 16 | 281 | 266 | 7.9E-187 | – | |
| Pfam | 22 | 281 | 260 | 4.6E-39 | ||
| Coils | 97 | 117 | 21 | - | – | |
| PANTHER | 282 | 696 | 415 | 7.9E-187 | – | |
| Pfam | 282 | 480 | 199 | 4.2E-54 | ||
| Gene3D | 494 | 697 | 204 | 3.3E-13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Mitotic cell cycle | Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent. | ||
| Cellular component | Chromosome, centromeric region | The region of a chromosome that includes the centromeric DNA and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
Expression pattern of LotjaGi1g1v0068400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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