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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0086600 |
| Transcript ID | LotjaGi1g1v0086600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial glycoprotein; TAIR: AT2G39795.1 Mitochondrial glycoprotein family protein; Swiss-Prot: sp|Q8W487|YB95_ARATH Uncharacterized protein At2g39795, mitochondrial; TrEMBL-Plants: tr|A0A0B2QM02|A0A0B2QM02_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0086600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:12521295..12529112) extracted from Lotus japonicus Gifu genome v1.2.
GTGCATATAAATCAAAATTTTCAAATATTTTTAGAAAAGTTCAATTCCAAATAACTTTTCTTTTTGTTTACTTTGACAAT AAATAAAAGTGTAAAAAAATCCCGTATTTATATATGTGAGGGTTTGTAGAGTTTCCCAAACCCCAATCCTCCTAAAACCC TCACAAAACCCTAGCAAACCTCTTCTCTGGAAATGGCGTTCAACTCGATTCTTCGCAAGTCGAGTCCTTTATTGAGGTCT TTTGCTGCTGCGGGCCAATTGATCAAGAAAACCCAACCGGGTCATCGCGCCGCCCTGTTCGCCGCCGTCAACCAGCTGCA CCGGCACCAGGATTCCGTGGTTCCGAGATTTCACTTTTCTTCTGTGGCTGTCAAGAACAAACCCACCTCCGATGAGACCC TTCTCCGAGTCATCGAATCCGAAATCACCTGCGCTGAGGAAACCGACGATCACAGCGCTGTAAGTTGCATCTCTTCCCTC AGTTCATAGTTTCATGATGAATAAATGATGGTAGTGGCTAAATTTCTATTTTCAATTTTTTTTGTTGACCAAATAGAATT TATAATTTATTAGTTACATTCAGTGGCGGAGCCAGGACTTTTAGAGAGCCTGGGCAAGATTAAGTCGCCTAACTACCCCA CATCTAGTTTACATTGTGGTTGCGGTGACAGATATTGCGGTGTTTCAACGTAAATAGTTTGTTGTAATGACAAATATGTC TCATTCTCAATTGAACACTCAACTCAAATATATAGTTAACAGATTCAAAATTAATATCACCTTAATTTTATCAATATTAA ATATATTAGCAGACTTTATATATATAACTTCCTCTTGTAAAAAAATTGATTATTAGGTGCTAGAAAATAAAGGAAAAATG GTTATCTGAAATCAAGGTCCTAATGGTGTAAGTAATCAGGGGAGGGGACACGTTATGGTGGTGAGAGTGCCAGGTGGCTC AGGGACTAGTGATTCAATTTCAGAAGCTTTGAAAAAGTTGAGAAAAATGTCACATGATAAGCCATGGTTTGTTTGGATGG GTCACGCTTGTGTTAGAGTTTGAGGTTTTTTCTTTCTCCTTCTATGCTCTTCTCTTTCTCTCCTCATTTCAATTTCAATC CCAAGTCAAGTAAGTGTTTGGGGGCATTGGAACTGAATCAGAAGATGACGATCACCGTGCAATCAACGCTCGGAAGCTAT GGGTATTTGGAGAAATCTCTAGTGAAAGAAACTTCACACCAGCCCCAAATACAAGTAGCCACTCTCCTCATCTCAAGGTG CAAGAGTTGTGCTCTCTGGCCTCTCACCTCTGCTACTGCTACTGTTATTCTACTCTAATAATTCATTCACAGACTCACTC ACCCACTCACCCTGACCCACCGCCTCGCTCCCTCAGGCCTCACCCACAGCGACACAACACAATCCTCTTCCCTCACAATC GATCAACATAGGACACTCTTCACAATTTTGCCCTTTCTTTCTTCTTCTTTTTTTCCCCAAGACCTTACCTGGTCCAAAGA AATAAATTTTTTTTTTCCTCAGAGCCTGGGCAAAGGCCCAGGCAAGCCAGGCGGTAAATCTGCCCCTGGTTACATTGCTC TTTTGTTTTTTGAATTTATGTTCTGCAATGTTGAAATTTCATTTTTTCTTTCCATTTTTTGTTGTTGACCAAATAGGATT TAGGCCATGTTTGAGAGAGCTTATTTGAGTTTATCTGATAGCATAAACGCTTGTGCAATTGTTGGGAAGAGCTTATGCAA ACAGCTTATGACGCTGTTTTGAGCTTATTTTCATAAGCTACTCATGATAGCTTATGAAAAAGAGCATATGCTTATAGATA GTTTATTTTCAATTTATTTTAATAAATTTTTTAAAATAGCTTATGAATAAGCGCTTAATTAAGTTGTTTTCTCAAACGGG GCCTTATTAGTTAAATTGCTTTTTGGTTTTTTGAATTTATGTTCTGCAATGTTGAAATTTCAATTGGTTGATGCTAGGAG GAGGATCTTCCGAAAAATTTTCCTTTTAAGATAGTTGATAATCCGGGAAACCAGACCATAACACTGGAAAGGACTTACCA AGGTGAAGAGATTAAGGTTCAGGTTGACATGCCTGATCTTGTCACAGGGGAAGAAAATGGTGTTGATGGTGGCGGTGATG ATGAGAGTGAGAGAGCATCTCAGTCAAGCCTTCCACTTTCAGTGAGTGTTTCCAAGAAGGGTGGACCCTTCTTGGAGTTT AGCTGTATGGCTTACTCTGATGAGATTGTTATTGACAGCTTGTCTGTTAAGAATCCTGAGCTTTCTGAGGATCAAATTGC TTATGAGGGACCGGATTTTCAGTATGCCCTTCTTCTCTTCTTTCTGGATCTTATTATCATTATTATTGTCCTCTTGAATT TGCAACTTTATTTTTGTTTTAGTTAGGCATTGTTTGATTGAACTTGTTCTGTTTCAGGGATCTGGATGAGAGTTTGCAGA AGTCTTTCCACAAGTATTTAGAAATCAGAGGAATCAAACCTAGCACAACAAATTTCTTGCATGAGTACATGATCAACAAG GACAGTAAAGAATACTTGGTGTGGTTGAAAAAGGTCAAGAGCTTCATTCAAGCATGAGCTTTCATTCAAGAGTTATGTGC TTACAACTGCTGTCTGTCAGCTTGGAAGATGCTGATTTTTTGTCAAATCACTTAGTATGCATTTGAAGAAAAACATAATC AGAGATCCTAACATTATGTTTCAGTAGTAGCTCATATTAAAGGCACATTATTATGGCTGAAAATGTTTAGTTATTTTATT TTATCCACCTGCATTTCTCGTGGGTGCTTTGTTAGACGGCTTTTAGCTGGGATTCATAAGCTGTGCGCATTTTTATATGT AGCAAGATAGTATATGGCTATATGTTGAACTTGTGGTTTGGCTTCAATTTGATGAATGCATCTCTATCGCTTATGGAATA GAATTTTGCATGTTACTTTTGAAATAGCTTATTTTAGAGTAGTTTTCAATTTTTCTTTTTAATTTTCTAGGAACATAGGA ACACGAGAATTCTCAAATTGGGTAGGTTATAGGTTTTTATATTTTTTTGCACTTGTGATAGAGTTTAAACTCCCTTTTTA GTGTTAAAAATAAGGATTTTCTGTTAGTATGGTAAAAATGGTGTATATCAGCCCACTCCTGAGCAAAATGAGTAATTTTT ATGCACTTTTAATTGAAAATATAATCACGTATACTAATTTAGGAACATATTACCGATTAGATTCAAGGCAATTCAAACTT GTATTGATAAGAGGCTTGAACATATTACCGATTAGCACATCATTTAAGTGGAAAAAATGATGACATTAACATACCTCTCA GAAACAATCATCTCACTAATCTAAATTATAAACATAGATGTCAATAAACAAGAATTCCATTGGAACTTCATATTCCCTGC ATTTTCCTAGCATGAGCAGAGGACAAGTAGATAATGTAAGTGTTTAAGCTGAAAGGAAAGGTTATAATATTCATTTGCTC ACTCCAAAAACAAATGCATTAAATAACAAAATCCTCACAAGTCCTGTAATTGACATTGCCGGAAACATCTTTAGGAAAAA AAATCAACAGTTAATACAAATACCCCTGTTTAATCGTACAACTCCACCCTGCAATCCCATGACAAGAGGTTACAGAAGAA AATACAGCAGACAACAGCCAAATTAAGTTGCAAGGTCTCTGTGGGTGTAGACAATCTCTTTATCACCATCTACTACTTGT CCACTTCCTTTCAGAATCCTGCGCACGCAAAGAAAAAGTAAAATAACACTAAGGAAAATAACAAAAACTTGCTAGAATAA ATATTATCTTGGATGGGAAGAAATTTAAGATATTAGATGCATGGGTTGAAAGTGTATCATAGACTGTAGTGTTGGTTTGA ATATTAATCTGGTAGGAGCAAGTTGATTTTTAAAGATTTGCTATGTACTACCCATTTAGATGCAAATCAAAGAACAGTTA TTAAAACTTATTTAGTGCACTTTCTGGAGTAGTTAAGCTCCAATAAGCCTGAATCCAAACAGGCTCGTAGATTATAAGTG ACAAATGAGAGGCTGAAATGTAAACTATATAGTCCTTTATTAGCACATATAGATTAATTTTATATGAATGATAAATCTTT CATTCCTCATGCAAAAGTGATTAGTGACATTCAAGTACATATATTAACCAAGAGACAGAATGGAATTGTTAGTTGTATAG TACAAGATTTGTACTGTTTCTTAAGCATTATAATGATCACCAGCTCATACCATCTTGTTGTCAACAATCCTTCAACGCCA ACTGGGCCTCGAGCATGAATCCTGCTTGTACTTGTTCCAACCTATTCAACCAAGACAGAAATACAAAATTAAATCAACAA CATTAATTCAATAGATTGATTAGAAAATGCAAAAAAAGAAAAAACATACCTCTGCACCTAGTCCAAATCGTGCCCCATCA CAAAATCTTGTGCTTGCATTGTGAATAACAGACGCACTATCAATACAAGACAAACGATAATTACATCACTTCCATTGCAC AATGTGCTGATATCTTCTGAGAAAGCAGTGATAGTTTAAAGGGTAATGTTTGTTTAATGTTATACTTTTGTGTAACTTTG TCAAAGACTGCCAAATAGTTACACAATAACAAAATGCTGCAAAGTAGAGAATTGAGTGAAATATCTTTTTCAACTGTATT TATTATTTATCATTGCAGAAACGAGATTAAGGAGCATGGTGTTTCAGATATTACCTGTCTACTTGGCGTAGGAACACATC AGCTACTTCATGATCTTCTGCAACGATGCAATCAGTATGTGCACTGCCACACAAAGAAATAGAAGATATGATATTTTTCC ATATTAACCCACTGCACCAATATAGATGTCGGTTTGAATTGGAACAGAGAGTAGAAGGGAAATGAAAGCAATCTGTTTCA CACGTTTCTAATAAAGAATAAAACACTGACATGCCTTCCATAAAGATTTATATGATTAATAGCTGCATACACATCATCCA CAATTTCAACAGTGCAAGCCAATGAACTGTACTCATGATGAAACGTACGTGCCTGTGGAATATTTAACAAAGAAGTTGCC TTTGGTCCTCCATATAATGTAACACCTGCATAAATTTTACATCATTTTTGCATTTGAAATAAGATAGTAACACCTATCAA TTCAGTATAACAGTCTTCCGACTCCCAGATAATATGATAAATTTTTCAATCTTTAAAATGATGAAACAACGCACCAGACT AGTAAGGATGCAAGACTTAGGTTAACATAAAGATAGATTGCAATATAAATCTTGGGGATGGCTTTCATTTTCTTTAATTT CCTAGAAGATCGTTTAAATTTCTTTAATATTTATTAATCAACAAAAAGAAGAATAATGAACATTATTTAGATTTTTGACA CTCGATTAGCATTTAAAATTAAATATCTAAGATCTTTTTGAACATGAAAGTTTCAGTTCCAAAAGGAAATAAATGCCCAT ATTAGAAATTTACGTGAACAAACTCTAAACCATTAAATAATAGATATTTAAATATGCTTCTCTTTATAATGTTCAGCGTA TGAGCGTAAAATTTGTTCACAATGGATTGGAATCTGGAATTACAAGCACTGTGATGCAGAAGGCCCTGAGACATAGCATT AAAACCATCATACTCATGCTTTCTTTATGTTGTCTTCTCAACAGAATTTGCTCAAGAGAATTTAAGAAATCATACAACTA AATTCCTTATTTGTTCATCATATAAAATTCAGCTTTGCTATGTGTTATTACATCCACTCTATGCAGTAAAATCTAACATG AGTGGCTTTAGGGGTTTGGTTGAGATACAAAACCTACATCTTATTTACCCACAAACATCCTCAAAACCAACACCATATTT CCCATAAGAAAATATATAAAAAAATATTGCCAACTGAGTTTATTAGATAACGCGGGTTCTTATCTTCTAATCCAAATCTT AAAGAGCATGCATTTTGCAGCCATGCATTAGCATGAGTCCTTAAACTTCCAGAAAGGATAAAAAACTTGGCATATTAAAA GACTTGATTGCAACCTGATAATTATTATCATTACGCAATCACGAAAATCAAATGTTTAAATGTCATATTTTTGGAGAGAA ATGAGAAATTACAACAAAAACCTTTATCCAGCTAGAGCTACAAACAAAACCTAATGAGTAGTATCCAGAAATTAAAGCAA ACTGTATTATCACCTGTTGAAAGAGAATCAAGAACAAGAGGAAATGATTGCAAGAAATTATACCTTTCGTTTGTAGGTCA ACTATAATATCATTAAGCCAACCTTTCTCTATTAACTCCTTGTGGACAAGAAGTGTTTCCTAAGAGTTAAAATTTTAAAA GCAGACAAAAAGAAGTTATGCATGGCAGTGATTCATGAGCAAAGAAAATAGCTAACATCAGCAATCTTGCACGGTCATCC GGTACATTTAATTTACCATGGCATTGCAGGCTGCTGGATAATATACTTTTGCATCCAGTACAATCTGCCTTGCCATCTCC GTGTTAGCAGACTTGTCAACATAGACGTGGCAAATTCCATCTGGATCAGTAATAATGAACCTTATTATGATTTATGATAG TCACTAATAAATTCTTTCACTAGGATTTACCATACCATATCAAGCAATCAAGCATTGCTGATAAGATCCAGCCAAGAATG TAGAGAGAAAGAGTATTATTCAAGATGAACCATAATTCCCAATTGGGGAATTAGAGAAGGATATAAGTAACTGATGAGTA TTGGAGAGACTCATCACTCTCCTAATTCCCAATTCCCAAATGATCCCAAAGATACTCAACACTCTTACAACCTTCCAATT TATAGTTACTAACCCCAACTAACTAACTAAGTGTATCTATCAATTGCTCGCTTATTATGTATAAACATAAGCACAATGGT CTTACCTGCATGACCCAACTCGGGAATTTTTGTGGAACTCTTGATCTGAGATACAAGTTTATTGCTGCCTCTTGGAATCA CCAGATCAATTACGTCATCCAGCTGAAAGTTAAATGAATTGAAGTCCTTGTTTCGCTAAAAGGTTATAATTTCAAACGGA ACAAGTTCATAAATCTGCAATTAAGCTCTACTGATAAATATACCTTAAGTAGTTCAGGAATTTCTGCTCTTGATGTCACA AGTCCAATAAGTTTTCCACCAACAGTATCTGGTATGGCTTCAGTAATTACCTGCATCCCAGAACAGGAACCACCCCCAAA AGAATTTATTAATGAGATTGCCAGACAGTATTAAATTCAAACAGAAAATAGTTTAAGATTATCTTATTTGAAACCAAACT TTGTGCAAAATTGCATTTGATCGCAAAGCTTCCTTGCCTCCTTTCAAGAGAAGTCCATTCCCACTTCTGATTGCCAAGGA AGCTATCTGTTCAAAAGATACAAAGCGACCAGATCAATAATGATAAACAGTTAAACTTCAGATTCATTTAATCAATTAGA AACCTATGCATACAATAAATGTATTTGCAGTAACATTAAAAAATTAAAAAGCTCAATTTGCTAGCACATACGTCTAAAGG ACAAAATATCCCCTTTTTACCAATACAGCCCAAGGGGATGAGAACCTCTCAATTTTACAGATAAGTACCATATATCTGTT AAATTTCGATACCCCATGCTATCAAGCTTATTTGAAAGCACACATTCATTTAAGCAACCCCCACCCCAAAAAAAAATTCA TTTAGGTTAACAGATCTCCCTCTTAACAGATCTTCCCTAATACCTTCTGAATGCTGAC
CDS sequence (LotjaGi1g1v0086600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTTCAACTCGATTCTTCGCAAGTCGAGTCCTTTATTGAGGTCTTTTGCTGCTGCGGGCCAATTGATCAAGAAAAC CCAACCGGGTCATCGCGCCGCCCTGTTCGCCGCCGTCAACCAGCTGCACCGGCACCAGGATTCCGTGGTTCCGAGATTTC ACTTTTCTTCTGTGGCTGTCAAGAACAAACCCACCTCCGATGAGACCCTTCTCCGAGTCATCGAATCCGAAATCACCTGC GCTGAGGAAACCGACGATCACAGCGCTGAGGAGGATCTTCCGAAAAATTTTCCTTTTAAGATAGTTGATAATCCGGGAAA CCAGACCATAACACTGGAAAGGACTTACCAAGGTGAAGAGATTAAGGTTCAGGTTGACATGCCTGATCTTGTCACAGGGG AAGAAAATGGTGTTGATGGTGGCGGTGATGATGAGAGTGAGAGAGCATCTCAGTCAAGCCTTCCACTTTCAGTGAGTGTT TCCAAGAAGGGTGGACCCTTCTTGGAGTTTAGCTGTATGGCTTACTCTGATGAGATTGTTATTGACAGCTTGTCTGTTAA GAATCCTGAGCTTTCTGAGGATCAAATTGCTTATGAGGGACCGGATTTTCAGGATCTGGATGAGAGTTTGCAGAAGTCTT TCCACAAGTATTTAGAAATCAGAGGAATCAAACCTAGCACAACAAATTTCTTGCATGAGTACATGATCAACAAGGACAGT AAAGAATACTTGGTGTGGTTGAAAAAGGTCAAGAGCTTCATTCAAGCATGA
Protein sequence (LotjaGi1g1v0086600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFNSILRKSSPLLRSFAAAGQLIKKTQPGHRAALFAAVNQLHRHQDSVVPRFHFSSVAVKNKPTSDETLLRVIESEITC AEETDDHSAEEDLPKNFPFKIVDNPGNQTITLERTYQGEEIKVQVDMPDLVTGEENGVDGGGDDESERASQSSLPLSVSV SKKGGPFLEFSCMAYSDEIVIDSLSVKNPELSEDQIAYEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYMINKDS KEYLVWLKKVKSFIQA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 18 | 18 | - | – | |
| PANTHER | 1 | 255 | 255 | 7.3E-109 | – | |
| PANTHER | 1 | 255 | 255 | 7.3E-109 | ||
| Gene3D | 59 | 255 | 197 | 9.1E-51 | ||
| SUPERFAMILY | 64 | 254 | 191 | 3.14E-51 | ||
| Pfam | 75 | 254 | 180 | 5.4E-49 | ||
| MobiDBLite | 129 | 157 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Mitochondrial matrix | The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation. |
Expression pattern of LotjaGi1g1v0086600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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