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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003428
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We have found 19 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.314s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0072049.1
n.a. PREDICTED: mitochondrial acidic protein MAM33-like [Glycine max] gi|356553032|ref|XP_003544862.1| chr0 26583928 26585981 +
2 domain predictions
1 GO term
Lj1g3v3443790.1
n.a. mitochondrial glycoprotein family protein [Arabidopsis lyrata subsp]. lyrata] gi|297810303|ref|XP_002873035.1| chr1 39831677 39834248 +
4 domain predictions
1 GO term
Lj1g3v4236970.1
n.a. Mitochondrial acidic protein mam33 [Medicago truncatula] gi|357509645|ref|XP_003625111.1| chr1 49987619 49993198 -
4 domain predictions
1 GO term
Lj1g3v4236970.2
n.a. Mitochondrial acidic protein mam33 [Medicago truncatula] gi|357509645|ref|XP_003625111.1| chr1 49989101 49993116 -
4 domain predictions
1 GO term
Lj2g3v2658300.1
n.a. mitochondrial glycoprotein [Zea mays] gi|226497428|ref|NP_001152571.1| chr2 35770636 35773710 +
4 domain predictions
1 GO term
Lj3g3v2170500.1
n.a. Mitochondrial acidic protein MAM33 [Medicago truncatula] gi|357467833|ref|XP_003604201.1| chr3 26880831 26882751 -
4 domain predictions
1 GO term
Lj5g3v0526480.1
n.a. mitochondrial glycoprotein family protein [Arabidopsis thaliana] gi|18417911|ref|NP_567885.1| chr5 5609826 5613422 -
2 domain predictions
1 GO term
Lj5g3v0526490.1
n.a. mitochondrial glycoprotein family protein [Arabidopsis lyrata subsp]. lyrata] gi|297798768|ref|XP_002867268.1| chr5 5610541 5613379 -
4 domain predictions
1 GO term
Lj5g3v0526500.1
n.a. mitochondrial glycoprotein family protein [Arabidopsis lyrata subsp]. lyrata] gi|297798768|ref|XP_002867268.1| chr5 5617497 5619235 -
4 domain predictions
1 GO term
LotjaGi1g1v0027900.1
n.a. Mitochondrial glycoprotein family protein, putative; TAIR: AT4G32605.1 Mitochondrial glycoprotein family protein; Swiss-Prot: sp|O94675|MAM33_SCHPO Mitochondrial acidic protein mam33; TrEMBL-Plants: tr|V7BBP7|V7BBP7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0027900 LjG1.1_chr1 3369353 3371795 -
2 domain predictions
1 GO term
LotjaGi1g1v0086600.1
n.a. Mitochondrial glycoprotein; TAIR: AT2G39795.1 Mitochondrial glycoprotein family protein; Swiss-Prot: sp|Q8W487|YB95_ARATH Uncharacterized protein At2g39795, mitochondrial; TrEMBL-Plants: tr|A0A0B2QM02|A0A0B2QM02_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0086600 LjG1.1_chr1 12521295 12529112 -
3 domain predictions
1 GO term
LotjaGi1g1v0578300.1
n.a. Mitochondrial glycoprotein family protein; TAIR: AT5G02050.1 Mitochondrial glycoprotein family protein; Swiss-Prot: sp|Q8W487|YB95_ARATH Uncharacterized protein At2g39795, mitochondrial; TrEMBL-Plants: tr|A0A0B2P8Z7|A0A0B2P8Z7_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0578300 LjG1.1_chr1 111798617 111803172 +
3 domain predictions
1 GO term
LotjaGi1g1v0670600.1
n.a. Mitochondrial glycoprotein family protein; TAIR: AT2G41600.3 Mitochondrial glycoprotein family protein; Swiss-Prot: sp|O94675|MAM33_SCHPO Mitochondrial acidic protein mam33; TrEMBL-Plants: tr|I3SNZ6|I3SNZ6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0670600 LjG1.1_chr1 123423706 123428658 -
3 domain predictions
1 GO term
LotjaGi3g1v0351200.1
n.a. Mitochondrial glycoprotein family protein, putative; TAIR: AT1G15870.1 Mitochondrial glycoprotein family protein; Swiss-Prot: sp|Q8W487|YB95_ARATH Uncharacterized protein At2g39795, mitochondrial; TrEMBL-Plants: tr|I1KVJ8|I1KVJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0351200 LjG1.1_chr3 73018659 73020825 -
3 domain predictions
1 GO term
LotjaGi5g1v0055500.1
n.a. Mitochondrial glycoprotein family protein, putative; TAIR: AT4G31930.1 Mitochondrial glycoprotein family protein; Swiss-Prot: sp|O94675|MAM33_SCHPO Mitochondrial acidic protein mam33; TrEMBL-Plants: tr|I3SGA2|I3SGA2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0055500 LjG1.1_chr5 9410574 9414469 -
3 domain predictions
1 GO term
LotjaGi5g1v0055500.2
n.a. Mitochondrial glycoprotein family protein, putative; TAIR: AT4G31930.1 Mitochondrial glycoprotein family protein; Swiss-Prot: sp|O94675|MAM33_SCHPO Mitochondrial acidic protein mam33; TrEMBL-Plants: tr|I3SNM5|I3SNM5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0055500 LjG1.1_chr5 9410591 9414344 -
3 domain predictions
1 GO term
LotjaGi5g1v0055500.3
n.a. Mitochondrial glycoprotein family protein, putative; TAIR: AT4G31930.1 Mitochondrial glycoprotein family protein; Swiss-Prot: sp|O94675|MAM33_SCHPO Mitochondrial acidic protein mam33; TrEMBL-Plants: tr|I3SGA2|I3SGA2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0055500 LjG1.1_chr5 9410665 9414187 -
3 domain predictions
1 GO term
LotjaGi5g1v0055500.4
n.a. Mitochondrial glycoprotein family protein, putative; TAIR: AT4G31930.1 Mitochondrial glycoprotein family protein; Swiss-Prot: sp|O94675|MAM33_SCHPO Mitochondrial acidic protein mam33; TrEMBL-Plants: tr|I3SGA2|I3SGA2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0055500 LjG1.1_chr5 9410993 9414378 -
3 domain predictions
1 GO term
LotjaGi5g1v0055600.1
n.a. Mitochondrial glycoprotein family protein, putative; TAIR: AT4G31930.1 Mitochondrial glycoprotein family protein; Swiss-Prot: sp|Q8W487|YB95_ARATH Uncharacterized protein At2g39795, mitochondrial; TrEMBL-Plants: tr|I3SGA2|I3SGA2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0055600 LjG1.1_chr5 9418031 9420050 -
3 domain predictions
1 GO term