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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0091800 |
| Transcript ID | LotjaGi1g1v0091800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plastid movement impaired protein; TAIR: AT1G66480.1 plastid movement impaired 2; Swiss-Prot: sp|Q6NLC8|Y1648_ARATH Uncharacterized protein At1g66480; TrEMBL-Plants: tr|I1M862|I1M862_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0091800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:13349855..13354191) extracted from Lotus japonicus Gifu genome v1.2.
CCTCTTTTCCTGAATGGGTAGGAGTACCATAACAATAACATTGATTAAGATTGAAGGTTGGTTTGGCCTACCCCACAACC CTTATAATTATAACCCTAATCAAAGTTTTCCCACTACTATTTACCACTAACCAAACCTTTTCTTAAATGGAATCTATACA TCTAGATAGTAAAATTCCACCCATTCACACATGCCCACACCCCAAAATTCAATTTTGATTTTGTCAACCTCTTACTACTA TATTAATCTCAATATAAATTAATAAATACCACCCCAAAGCTCACACTACATAGAACAAGATAAAGAAAACTAGAAGCTAT CAAAAATGGGAAACACAATTGGAAGAAGCAAAAGAGCAAAAGTGATGAAGGTTGATGGAGAAACCTTCAAAGTGAAGATG CCAGCCACTGCAAACGACGTAGTAAAAGACTACCCCGGTCACGTTCTCCTTGATTCCCAAGCGGTGAAGCATTTTGGGCT TCGGGCCAGGCCACTTGAGCCCAACCAAGAGCTCAAGCCCAAGAAAATCTACTTCGTGGTGGAGTTACCGAAAGTTCAGG AACCAGAGGAGGTAAAAACGGCGTCGTCGTCGTCACTGCCGAGGAGGGTGCGATCCAGTGGTATACAGGGCATGAAAGCT AAGGATAGGCTCGAGCTATTGATGCTCTCGAAACGCTCCGTTTCGGACCTTGCACTTGTGAGGCAGCCAACGACGAACGT GGGCCTGGATGGGCCCATGAGAGTTAAGATGAGGCTGCCTAGGGCCCAGCTGGAGAAGCTTATGGAGGAGAGCAACGACG GCACTGAGGTGGCGGAGAAGATTATGAGGTTGTACGCCGGCGAGGGTGGTGGTGATGTGTCGGCGGATGATGGTGGAGTG AGGGTATCGCACCATCATGGTCACAAACCACGTGGGGTATGTCTTACTATCTTTGTTTTTTTTTTTTGATGATTTAGTAA TATCAATATATAATTATTTTATCTTATTAGTAAGTGTTATTACCTTAAGAGTTTAATAAATACGTACCGAAAAAATAATT TTACACCGCTAATTAATCACAATGTGTCACGTAGGAGGAAAGATAATTTTTCGTTTTAAATTCTAATTATGTTGTCGCAA AATTTAATTGAATAACTGTGTAAACAAAATTTATACTAACAGTGAACGTCCTTTACAATTCCATTATAAAATTACATTAG GTGTTGGCCATAATAGTAAAAATAGTTGTTTTGAATGTCTAGGTTTAGGGTTCGATTTTCATAAATCATATTAATCCTTA ACTTTCATTGTACCCGAATCGTAATTGTAATAACAATTTAGCATACTAAAGGAAAAATTATTTTAAAATTGAGAAATCGC GTTCTTGAATGTTTGAAAGTTGCTTGAACTTTCCTGTCGTGTTAGTTTGGACGTTTGGGTGTTCACGGGCGCTAATTATG GCGCTGCTTAATGGTGATGTCGACAATGGCATGTGATTGCATAAACAAAGTCGTTTTCTTGTTGTGGAATGCAAGCGTAT ATATTTTGACTATTTATGCTTTTTATATCTATATATAATAATATGTTTCTTTCTTTTGCTTCCCAACATTTTAAATTTGA TTGAGAAATGAGAATAAAGTTAGGTTGAGTTTGTATTAAGAAATTTTAAAATATTTCTCGAGAAGTAGGTTTGAAAATAT GACATTTTTATACTTTAATTTGAAACAATTTTTTTTAAAAAAATATGTTCTCAGGCATTATAGATTTCTAAATAAGTAAA TTAGTCATGTTGAGTTTACTTTGTATTAAAATATTTCTCACTTGTATGCTTCAATGCTTAAAAAAGTTTAGACAGTTAAG CATTATCATGTTCCACGGAATCTAATAAAATGGTAGACTGGTTGGTAGGAAGTTTTCATTCGTTAGATTTTGGGTTGCCG AGTTTTAGAGGACCCTTTAGAATTGCAGACTGATTGTTCATGGATTTACTGATTGTTCATGGATTTTTTATTTTTCCTTG GAGAGTTGATTTTAGCATCCCACCAACCTCAAACCCCACCTCACTTTGAAGTAGTATTTTCCTATAATGTTGGGTGCATA TTTATGATTATTTGCATATATCGTGACTTAAAACCTCATACATAAAATATGCATTTGTTGTCGGGTTAACTTGTTGAAAA ACATACTGAGTTTTAAAAAACCTGAGGCCAAAAACCAGATGGTCGTGAAGAGCGAGAAGGTCAAAGAAGAATGAGGGTGA TTTCAGAAAGAAAAGTAAGTAAAAAGGGGTACTGAGGTAGCAATATCAATCTCTTTTTTCTCGAGACTGTCTTTGTTTGA GTTTTGATCCTGAGCCTTTACCGCTTCTGTTAAATGAAACAAAAAATGATTGTGTACAATGAAAAATGAATTTTAAATAT ATATTATAAAAAATTATTTTCAGTCATTTAAATAAATTTTTTGAGGTGGCAATATAATACTCAAAATAAAAAAGTAGTTC TTTTCACACAAATAGATGTTTGATGGCCTCAAAATCGAAAACACGTTGCTTTCAGTTTGAGACTTGAGAGTGATTAGTTA GAGTTTGAAATAAGTACTTGATTTTGCTTTGAATAATGTCAAACATTTTAACTCATCAATAGCTGGAATTTATATATTCC ACGCTATTGCATAACATGCACTGGAAAACAATGTCCAAATTTTGTAGCATTACATGTGAACTCTATAAAATGCTCGTCGT TTACTCGTTGCGGCCCTAAATAAAATAAGTGTTATCGGAGACTTAGACAAGTTAGCTAATGATATTTGCAGTTTCCTCGT ACTTGGTTTCATTTTCTAGTTAGCTACTAAGTACTATTTGGGTATTAATTTCTAGGAATTATGTTAATGTTCTTTTTTAA ATTTTGCAGAAACGGGTGAGTTTTAGCCCAATGGAAAATGAAGTTCTAGAAGAAGCAGTTCCTCAATAGTACTATAGTAG CACTACAATTCCTTCCTAGCTTGTAACGATTAGAGGCAAGTTGTGATCAAACACAAGAAGGCCAAGGCAGTAGCATTCTA ATTTTTGTTTCAAATCTGTAGCATATTTCACTATTTGAGAACTAATATATAGTTATAGATTTGTATATAGTTTCATACAT TTATAGTGTTAAAGATTAAAAGATTAAAGTGTTGCTTCCAATTTTGCGTGGCTCATTGATAGTGTTTGTGAGTTAAGTCT GATGGTGATAGGCGAGGCTCACGTTTCTGTTCCGTCACGGTCACCTCTTGCACCCTTGTTTTCTGCTATTCTCGACCATG TTTCGTCCTTTGAAAAGTTGGGTGTGGACCCGTTTTGATCGATCGGATCGCCGGCTCTCCTCACTTGTCTGAGGCTGCGT TTGGACTAGTTCCTTTAGTCTTTGTTTTTTCTGTTCGTTTGTTTTTCTTTTAGGGTTTGCTCACAGCTTTTGACAGGGGT TTGGTTGATGTTTGGTTTTATGGGTTGTAGGTGTTTTGGGTCTTTGGATGGGTTGTGGTGGGTGTTTGCTAGTTTTTTAG AGGTTTTTGGGAAGGTTTTCGCTGTGATGGTTGGTTTTTGTCAGCCTTTTGGTTGATCAGGTACTGTACCCATGTTGTTG AGATGAGTTGTTTCTCAACATTCTATATTATTATTTAGGCTTAATAGCACTTTTGGTCCCCACGTTTCAAAAATGTGCAA TATTAATCCCCCACGTTTGAAAATAGCATAATGGTACCTCAACGTTTATCTCCGTTAGCAGTTTTGGTCCCTCAGCTAAT TTGCCGTTAGAAACTTAACGTTTTTGTGTGACATGGCATTTTTTTTTCTGATGTGGCATTAAGACTAAACACGTGAGAAT CACGTGAGCCTTATCACAACATTAACCCTCTGATTTTCTTCTCCCCATCGTGTTCTTCTCCTCCAAATCCCCAATTCACG AACCCTAGCCATGGGAGGTTCTGGAGCCACACCCAATTCGTGGGATTTTGATGCCGATTCGCGACGTAGGGTGCATGAAT CACGAAGCAGAGATGATATTTCCCATGGGAGTGCTGGGTTTCGCGACATGTCTTCAACCTCCACTGGTTCTGAGAGGAGG CGAAGAGTTGAGTTGTGCGATTGTGGTGTTGAAAGTCCACTGGTGACGACATGGACAGGAGTGAATCGTGGAAGGAGATT CTACGGTTGTGGGTTGTTTGAGGTATGAAAACTAATTGAATGAGCTCCCTCTTACTTCATCTTTCCTCTCTCAATCTAAT TTGTCTGATACAATGTGCAGGTTCATCGTAAGAAGATGTGCAACTTCTTTCAATGGCATGATGCTGATGACAATGCTAGG AAGAAGAAGATGATTGT
CDS sequence (LotjaGi1g1v0091800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAACACAATTGGAAGAAGCAAAAGAGCAAAAGTGATGAAGGTTGATGGAGAAACCTTCAAAGTGAAGATGCCAGC CACTGCAAACGACGTAGTAAAAGACTACCCCGGTCACGTTCTCCTTGATTCCCAAGCGGTGAAGCATTTTGGGCTTCGGG CCAGGCCACTTGAGCCCAACCAAGAGCTCAAGCCCAAGAAAATCTACTTCGTGGTGGAGTTACCGAAAGTTCAGGAACCA GAGGAGGTAAAAACGGCGTCGTCGTCGTCACTGCCGAGGAGGGTGCGATCCAGTGGTATACAGGGCATGAAAGCTAAGGA TAGGCTCGAGCTATTGATGCTCTCGAAACGCTCCGTTTCGGACCTTGCACTTGTGAGGCAGCCAACGACGAACGTGGGCC TGGATGGGCCCATGAGAGTTAAGATGAGGCTGCCTAGGGCCCAGCTGGAGAAGCTTATGGAGGAGAGCAACGACGGCACT GAGGTGGCGGAGAAGATTATGAGGTTGTACGCCGGCGAGGGTGGTGGTGATGTGTCGGCGGATGATGGTGGAGTGAGGGT ATCGCACCATCATGGTCACAAACCACGTGGGAAACGGGTGAGTTTTAGCCCAATGGAAAATGAAGTTCTAGAAGAAGCAG TTCCTCAATAG
Protein sequence (LotjaGi1g1v0091800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGNTIGRSKRAKVMKVDGETFKVKMPATANDVVKDYPGHVLLDSQAVKHFGLRARPLEPNQELKPKKIYFVVELPKVQEP EEVKTASSSSLPRRVRSSGIQGMKAKDRLELLMLSKRSVSDLALVRQPTTNVGLDGPMRVKMRLPRAQLEKLMEESNDGT EVAEKIMRLYAGEGGGDVSADDGGVRVSHHHGHKPRGKRVSFSPMENEVLEEAVPQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 210 | 210 | 6.8E-88 | – | |
| PANTHER | 1 | 210 | 210 | 6.8E-88 | – | |
| Pfam | 1 | 191 | 191 | 2.6E-20 | ||
| MobiDBLite | 174 | 216 | 43 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0091800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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