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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0092400 |
| Transcript ID | LotjaGi1g1v0092400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zein-binding protein; TAIR: AT5G16720.1 caldesmon-like protein (Protein of unknown function, DUF593); Swiss-Prot: sp|Q0WNW4|MYOB3_ARATH Myosin-binding protein 3; TrEMBL-Plants: tr|A0A0B2S5H8|A0A0B2S5H8_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0092400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:13571884..13577419) extracted from Lotus japonicus Gifu genome v1.2.
AAAGATAAATATAATATTGTGATCAAAGTCACTGCTGATAATTGAGATCCACTTTGGCCTAAAGGTAATTATGAATGGTG CATTTTACTGATACAGTGACTGAAACATTTGCACGTTTCTTAGTCTCTGTCTCTGCTTCTCTTGCCAATTACTCAGCTTT TGCTATTCTGTCAAACACTAAAGCTTGAGAAACACACTCTTTTCTTCTGATTCTGTTTTGTAATCTCTTTTGTGCTCTTG AGAGCTTCTTCCTTCTTTCCCTTCCTCACTCTCTTCCCTTCCCCTTCCCTCTTTCCAATCTCACACACACAAGAAATTAA CAAAGTGGAAACATCAATGGCCACCAACAAGTTTGCAACCATGCTACACAGAAACACCAACAAAATCAGTGCAACTCTAG TGTATGCAGTTCTAGAATGGTTCTTAATTATCCTCCTCCTTCTCAACTCTTTGTTCAGCTACCTTATCACCAGATTTGCC AAATGGGTTGGCCTCCAACCACCATGCATTTGGTGTTCAAGGGTTGATCATGTCCTGCACCAAGGAAAGAGCTCAAATTT GTTTTCAAGGGAACTTCTGTGTGAGACTCATGCAGCTGAGATTTCCAAGCTTGGTTACTGCTCAAATCATCAAACACTGG CTGAAGCACACAACATGTGTGAGGATTGCTTTGCTTCTCAGCCAAATCAACATGATGAAAACTCATTTGGAGTGAGACAC AGGATTGCTTTGATATCATGGGTGAGTCATGAAAGTGGAGAGAATGTGAAGAGGTGCTCTTGCTGCAATGAGAGCTTGAG AAGCAAGATTTACCCTCCTTATTTGTTATTGAATCCTTCCTGGGGGGATGGGAATTGCACAAGCAAAGGGTCCCTAATTG TAGAATCAATAGATGGTGAAAAGGAAGGAGATAAAGACCTTGACTTTGAGAGAAACAATGGAGATGGAGATCATGATGAT GAAGGGGTAGTAGCAGATGAGCATCAGATACTTTCTGATATTGAAAGTTTTATCCTCAGGGAGACAGCGGAGGATCGTTC AAGTTCTAATTCAAATTTGCAATCTGATGAAAAGGATGCAGAAAATGAAGAGAAGAAAGAAAAGGATGCACATTGGGAGG ATAGATCACTTGAAGTCATGATTAAGCACTTTGAGGATCATGTACCTTGTGATACCAATCGTTTGATACCTATCAAGTTA ATAGACTCTATTTCTTCTTTGAAATTTGGATCATGCAAATTGGATGAGGATCTGGGGGAGAAGGAGCAACAGATGCAGAG TTTTGCTATTGAGGCACCAATTGAAGCACAATCAACCATCTTAGAAGCAGCATTGCTCACAGTGGATAAGAAGAATGAAG AGAAATCAAGCATGAGAGAACTTCAAAGCTTGCTTAATTCTACTTCAGAGGTTGAGGAGTCAAAATGGAATTCAGTAGTT GAAGTAGGTCCAGAAATGGCTACTTATGAAGAGGCTAAAATTTCACTGAATGATGGCAACAGTGTTGAAGCACAAGGTAC ATTAAATTGCACGATTTATAGATTTTCTGGATATTTTTCTATTCACTCCTCGTGCCTTGTTCACGTTCCCTATTTCTTTT TAAACAAAAAGCATAATGTGCTTGTGTTGAATGATCCAATTAAGTATTTTGTAACTATAATAAAACAGATGTTTTTTTGT CATGCAGTTGATCAGTCTCGATCTCAAGAACCAGTGTGCTTATATGCATGTACACAAGAAGATGAATCTCAATCAAGTGA TGATGATGCTGAAGTTCCAAACGCATTTGGAAAATTCATTGCTCAAAATAATCTAGGCACGTCTCAAAGTTTATCCAAAG ATGATAAAAGTTTAGAAGCAGCTATGGAAGAACAAGAAAATACTTCAAGAGGTACAAATAACGGGCATGTATTATGTTGT TTTAAGTCTTCTACTTTGCTAGTTCATTAACTATGCCTGCATATTTAGATAAAATGACTTGATTTAGATTACTTGAGAGT TGAGAGATGATATCTTTAGCATTTATGACTTCAACATATTTTCACACAGCTAATTCACCTCCATATGAAGAACCACCCTA CTCATATCAATGCATACCAGAAGATCAATCTTCTGCAAGTGACAGTGAGGATGATGCTGAAGTTCCAAATGCCTTTGAAA AATTCATTGCTCAGAATAATCTAAGCATGTCTCAAACTTTATCCAACAATGATAAGTGTTTAGAAGCAGATACGGAAGAA CCAGAAAATACTCCACGAGGTACAAATAACGTGCATGAATTATGCTGTTTCTATCCTAGTTTGCTAGTTCATTAACTATG ATAGCATATTTTGACAAAATGACTTAGATCGGCATACTTGAGAGTTAAGATATCATGTCTTAAACATTTATGACTTCAAA ATTTGCTCACACATCTAATTCACCTCCATATGAAGAACCAAGCTGCTCAAATCAATGCATACAAGAAGACCAATCTTCTA CGAGTGAAAGTGAGGATGATACTGAAATTCCCAATGCCTTTGATGAATTCCTCGCACAGAATAATCTCTGTAAGTTTTAC ATATAGTACCTTAGTCTTTTTTTAGCTACTTTTCAATACCTCTGAACTGCAATTGAACCATAATAATGCAGGTCCAGATA AAACAGGTGGAAATAAATCAAATAATAGCGAATATACTGAAATGATTGCGAAAGCAACACCAATTGAGAAAAATCATGAA GGCACAAGCCATCAATCGTCCAAGGGCTCAGAGTCATATGAAGTAGAAGAAGATAAACTTCCTGAAACTCCCAGTTCTGT AGATGGCTTGCATTACCTACACAGGAAATCGATGCTCTTTGAGAAAAGGGAATCAGGTGCAGAGGATTCCGGGGATGGCA GTGTTGCGAGTGAGTTAGAATATGGTGATCCAGTACTAACAATTGACCGGCTGAAAACTGCATTAAAATCTGAACAGAGG ACTCTTAGTGCTCTATATCAAGAACTAGAAGAAGAGAGAAGTGCCTCTGCAGTAGCTGCCAACCAGACAATGGCAATGAT TACAAGGCTGCAAGAAGAAAAGGCAGCAATGCAGATGGAAGCATTGCAATACCAGAGGATGATGGAAGAACAAGCAGAGT ATGACCAGGAAGCTTTACAGCTTTTGAATGATTTAATGATGAAAAGAGAGAAAGAGAAGCAAGAGCTTGAGAAGGAATTG GAAGAGTACAGGCAAAAGGTGGTGGATTATGAAGAAAAACAGAATCTAAATGTGTTGAGAAGAATGAAAGATGGAAGTTT AAGAAGTAGAGATTCTTCTTCTTCTTGTAGCAATGCAGGCTACATTGATGATCTATCCATTGATCTTAACCATGAAGCCA GAGAAGATGATAATGGCTTTTTCAACCATGAGGAAAGCAGACACATTAATGGAACTGATTCAGTTTCTAATTTGGAGGAG ATGGCGCTAGACTGTGTAAAGCATGTAAGTGCCCTTGATAACACATTGGAGGAATTTGAGGAAGAGAGGGCTTCAATTCT AGATCAGCTCAAAGTATTAGAGGAAAAGATAATATATTTGGCAGATAAAGAGGAAATTCTTGATGAGGTCAAATTTATTG AGAGTTCAACATATGGTGACAAAGGCTTGATTGAGAATTGTGATTTTAGCAGTTTAGAGGACAACATGCATTCTAATGAA TTTTCAGATAATAAACACTCTCCAAGAAGAACAATGGGTTCTTTGGCAAAGAGGCTCCTGCCATACTTAGATGCAGCTGA TACTGAGATTGAAGAAGTGTATGCATTTGACAGACAATTGGAAACTGAAACATCTAGTATGCAAAACTCAGGACCTATTC TTCAAATGGATGGCATGAAGGTCTCCATTGAAGAGGAGGTTGATCATGTTTATGAGAGGTTACAATCTCTTGAAACAGAT AAGGAGTTTCTCCAGCATTGTATGGGCTCCATACAGAACGGAGATAAAGGAATGGATCTGCTTCAAGAAATCTTGCAACA TTTTCGCGATCTTAAGGCTGTGGAACTCCGCTTGAAGACCATGGGTAATGATCAACTATAGTGAAGTTGCATTCACCAAC CAAAGATGTGCAGGCACTAGGTATATGAATTTTATATTGAAATTCATTGTACTTTCTTAGCACCTATGTTTAAGAATACT AACATATTTCTTCACATGCTTACTAGATGCAGATAGCTTTGTTGGAGGTAATCATGATGGATATGCACATTTATGATTCC TGTGCTTCATGCAGAAGCATGGTAACCGAACTTTGTAACAAAAATACAGAAAATTTTCTCCAATGGAGGGAGGGATTTCT AGTGTCTTGTTGTGGTTTGTCAAATGAGTAAAAGAGATGCAGACAGAAATGTTAGAGTATGAACATGTTCATATTATAAG GTTTGAGTTTGGGCTACCCATGAAAATTGTGTGAAGCCCAAAATTTTACAGTAAAGAACTTGTAAGTAGCTAGAGGGGTG TTAATTGTTATGTATAAACCTCACAGCACAATCATGCATTCATCATCATGTACAACAACTTGTATCTATTTTAACTCTTA TTCCATGATCATTCAATTCAATATAACAATGAAAGATTGCAACAACAAAATTAGGCAAACAATACCATTGTAAACATCTT GAACTAGAAGTAAACTAAACTGATAACAATGTGCTATATATCAGGTCAATCAATATATCAGTCAAAACAAAAGACTAGAC AAGATAGAAATAGGAATATCACACCCATTCCATGAAAGCAGTTGAGGAATTTCCAGCACCATGAACACGAACCGGCGACA TTCCGATACGAATCTCCCAATTTCTAGCTGGTCCCGTAGCACGAACAGACGGCATTTCAATAGGAACCCACCACCACAAA CAGCACATGTAAACTAAGTAGCAGTGCAAGCCATCGAGAAAGCAAACAATGGAACACACAACTATGGAAGCACGTTCCCT TGGACCAATGTTGACACCAGGGATCATCATCATGGGGAGCAGTTTCAAGAGCAACACAAACATAGCAGACAATCCGAAGT ACAAGAAGGAGAGTGCCTTGAGATGGATCACCACGATGAATGGGTCTGGTAGCTGTACAGCCATGGATATGAGCTCGATC AAAAGAAAGCTCACCGTCAACAAGATTGCCACCAGTGTGTCAAGAACCCTCATCATCACCTGAAATGAGAGCAAGAATGG TGCAAGAATGAAAGCAATTTCATGCATGATTCTACTACTTGTGCGAAGAAGAAGATGAGTTGTTTGTTGTTGTTACCATT GAAGAATCGTTGAAGCTATGAAGTTGAGTTGGTTCTTCTTCTTTCTTGTTCTTCTTCAAATGCAGTTGCAGTTGCAGAGC ACAAGAATCGTTTGCTTGCGATTGAGAATGCGAGTGTGGAGTGTTTTGGTTTTCTGTTTCGCCATTTACTATTTATAGAC AGAGTGGAATGAGTGAAACGGAGAGAGGTGTTGGCGCGGAGGAGGTGGTGGCGGTTGGTGGTGGTTGCTGGAGGAGGAAA AATGGCAGCAGAGTAG
CDS sequence (LotjaGi1g1v0092400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCACCAACAAGTTTGCAACCATGCTACACAGAAACACCAACAAAATCAGTGCAACTCTAGTGTATGCAGTTCTAGA ATGGTTCTTAATTATCCTCCTCCTTCTCAACTCTTTGTTCAGCTACCTTATCACCAGATTTGCCAAATGGGTTGGCCTCC AACCACCATGCATTTGGTGTTCAAGGGTTGATCATGTCCTGCACCAAGGAAAGAGCTCAAATTTGTTTTCAAGGGAACTT CTGTGTGAGACTCATGCAGCTGAGATTTCCAAGCTTGGTTACTGCTCAAATCATCAAACACTGGCTGAAGCACACAACAT GTGTGAGGATTGCTTTGCTTCTCAGCCAAATCAACATGATGAAAACTCATTTGGAGTGAGACACAGGATTGCTTTGATAT CATGGGTGAGTCATGAAAGTGGAGAGAATGTGAAGAGGTGCTCTTGCTGCAATGAGAGCTTGAGAAGCAAGATTTACCCT CCTTATTTGTTATTGAATCCTTCCTGGGGGGATGGGAATTGCACAAGCAAAGGGTCCCTAATTGTAGAATCAATAGATGG TGAAAAGGAAGGAGATAAAGACCTTGACTTTGAGAGAAACAATGGAGATGGAGATCATGATGATGAAGGGGTAGTAGCAG ATGAGCATCAGATACTTTCTGATATTGAAAGTTTTATCCTCAGGGAGACAGCGGAGGATCGTTCAAGTTCTAATTCAAAT TTGCAATCTGATGAAAAGGATGCAGAAAATGAAGAGAAGAAAGAAAAGGATGCACATTGGGAGGATAGATCACTTGAAGT CATGATTAAGCACTTTGAGGATCATGTACCTTGTGATACCAATCGTTTGATACCTATCAAGTTAATAGACTCTATTTCTT CTTTGAAATTTGGATCATGCAAATTGGATGAGGATCTGGGGGAGAAGGAGCAACAGATGCAGAGTTTTGCTATTGAGGCA CCAATTGAAGCACAATCAACCATCTTAGAAGCAGCATTGCTCACAGTGGATAAGAAGAATGAAGAGAAATCAAGCATGAG AGAACTTCAAAGCTTGCTTAATTCTACTTCAGAGGTTGAGGAGTCAAAATGGAATTCAGTAGTTGAAGTAGGTCCAGAAA TGGCTACTTATGAAGAGGCTAAAATTTCACTGAATGATGGCAACAGTGTTGAAGCACAAGTTGATCAGTCTCGATCTCAA GAACCAGTGTGCTTATATGCATGTACACAAGAAGATGAATCTCAATCAAGTGATGATGATGCTGAAGTTCCAAACGCATT TGGAAAATTCATTGCTCAAAATAATCTAGGCACGTCTCAAAGTTTATCCAAAGATGATAAAAGTTTAGAAGCAGCTATGG AAGAACAAGAAAATACTTCAAGAGCTAATTCACCTCCATATGAAGAACCACCCTACTCATATCAATGCATACCAGAAGAT CAATCTTCTGCAAGTGACAGTGAGGATGATGCTGAAGTTCCAAATGCCTTTGAAAAATTCATTGCTCAGAATAATCTAAG CATGTCTCAAACTTTATCCAACAATGATAAGTGTTTAGAAGCAGATACGGAAGAACCAGAAAATACTCCACGAGAACCAA GCTGCTCAAATCAATGCATACAAGAAGACCAATCTTCTACGAGTGAAAGTGAGGATGATACTGAAATTCCCAATGCCTTT GATGAATTCCTCGCACAGAATAATCTCTGTCCAGATAAAACAGGTGGAAATAAATCAAATAATAGCGAATATACTGAAAT GATTGCGAAAGCAACACCAATTGAGAAAAATCATGAAGGCACAAGCCATCAATCGTCCAAGGGCTCAGAGTCATATGAAG TAGAAGAAGATAAACTTCCTGAAACTCCCAGTTCTGTAGATGGCTTGCATTACCTACACAGGAAATCGATGCTCTTTGAG AAAAGGGAATCAGGTGCAGAGGATTCCGGGGATGGCAGTGTTGCGAGTGAGTTAGAATATGGTGATCCAGTACTAACAAT TGACCGGCTGAAAACTGCATTAAAATCTGAACAGAGGACTCTTAGTGCTCTATATCAAGAACTAGAAGAAGAGAGAAGTG CCTCTGCAGTAGCTGCCAACCAGACAATGGCAATGATTACAAGGCTGCAAGAAGAAAAGGCAGCAATGCAGATGGAAGCA TTGCAATACCAGAGGATGATGGAAGAACAAGCAGAGTATGACCAGGAAGCTTTACAGCTTTTGAATGATTTAATGATGAA AAGAGAGAAAGAGAAGCAAGAGCTTGAGAAGGAATTGGAAGAGTACAGGCAAAAGGTGGTGGATTATGAAGAAAAACAGA ATCTAAATGTGTTGAGAAGAATGAAAGATGGAAGTTTAAGAAGTAGAGATTCTTCTTCTTCTTGTAGCAATGCAGGCTAC ATTGATGATCTATCCATTGATCTTAACCATGAAGCCAGAGAAGATGATAATGGCTTTTTCAACCATGAGGAAAGCAGACA CATTAATGGAACTGATTCAGTTTCTAATTTGGAGGAGATGGCGCTAGACTGTGTAAAGCATGTAAGTGCCCTTGATAACA CATTGGAGGAATTTGAGGAAGAGAGGGCTTCAATTCTAGATCAGCTCAAAGTATTAGAGGAAAAGATAATATATTTGGCA GATAAAGAGGAAATTCTTGATGAGGTCAAATTTATTGAGAGTTCAACATATGGTGACAAAGGCTTGATTGAGAATTGTGA TTTTAGCAGTTTAGAGGACAACATGCATTCTAATGAATTTTCAGATAATAAACACTCTCCAAGAAGAACAATGGGTTCTT TGGCAAAGAGGCTCCTGCCATACTTAGATGCAGCTGATACTGAGATTGAAGAAGTGTATGCATTTGACAGACAATTGGAA ACTGAAACATCTAGTATGCAAAACTCAGGACCTATTCTTCAAATGGATGGCATGAAGGTCTCCATTGAAGAGGAGGTTGA TCATGTTTATGAGAGGTTACAATCTCTTGAAACAGATAAGGAGTTTCTCCAGCATTGTATGGGCTCCATACAGAACGGAG ATAAAGGAATGGATCTGCTTCAAGAAATCTTGCAACATTTTCGCGATCTTAAGGCTGTGGAACTCCGCTTGAAGACCATG GGTAATGATCAACTATAG
Protein sequence (LotjaGi1g1v0092400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATNKFATMLHRNTNKISATLVYAVLEWFLIILLLLNSLFSYLITRFAKWVGLQPPCIWCSRVDHVLHQGKSSNLFSREL LCETHAAEISKLGYCSNHQTLAEAHNMCEDCFASQPNQHDENSFGVRHRIALISWVSHESGENVKRCSCCNESLRSKIYP PYLLLNPSWGDGNCTSKGSLIVESIDGEKEGDKDLDFERNNGDGDHDDEGVVADEHQILSDIESFILRETAEDRSSSNSN LQSDEKDAENEEKKEKDAHWEDRSLEVMIKHFEDHVPCDTNRLIPIKLIDSISSLKFGSCKLDEDLGEKEQQMQSFAIEA PIEAQSTILEAALLTVDKKNEEKSSMRELQSLLNSTSEVEESKWNSVVEVGPEMATYEEAKISLNDGNSVEAQVDQSRSQ EPVCLYACTQEDESQSSDDDAEVPNAFGKFIAQNNLGTSQSLSKDDKSLEAAMEEQENTSRANSPPYEEPPYSYQCIPED QSSASDSEDDAEVPNAFEKFIAQNNLSMSQTLSNNDKCLEADTEEPENTPREPSCSNQCIQEDQSSTSESEDDTEIPNAF DEFLAQNNLCPDKTGGNKSNNSEYTEMIAKATPIEKNHEGTSHQSSKGSESYEVEEDKLPETPSSVDGLHYLHRKSMLFE KRESGAEDSGDGSVASELEYGDPVLTIDRLKTALKSEQRTLSALYQELEEERSASAVAANQTMAMITRLQEEKAAMQMEA LQYQRMMEEQAEYDQEALQLLNDLMMKREKEKQELEKELEEYRQKVVDYEEKQNLNVLRRMKDGSLRSRDSSSSCSNAGY IDDLSIDLNHEAREDDNGFFNHEESRHINGTDSVSNLEEMALDCVKHVSALDNTLEEFEEERASILDQLKVLEEKIIYLA DKEEILDEVKFIESSTYGDKGLIENCDFSSLEDNMHSNEFSDNKHSPRRTMGSLAKRLLPYLDAADTEIEEVYAFDRQLE TETSSMQNSGPILQMDGMKVSIEEEVDHVYERLQSLETDKEFLQHCMGSIQNGDKGMDLLQEILQHFRDLKAVELRLKTM GNDQL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 488 | 488 | 0.0 | ||
| PANTHER | 1 | 488 | 488 | 0.0 | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| Phobius | 21 | 44 | 24 | - | – | |
| TMHMM | 21 | 43 | 23 | - | – | |
| Phobius | 45 | 1045 | 1001 | - | – | |
| MobiDBLite | 191 | 212 | 22 | - | – | |
| MobiDBLite | 231 | 259 | 29 | - | – | |
| Coils | 238 | 258 | 21 | - | – | |
| MobiDBLite | 244 | 259 | 16 | - | – | |
| MobiDBLite | 437 | 496 | 60 | - | – | |
| PANTHER | 489 | 1044 | 556 | 0.0 | ||
| PANTHER | 489 | 1044 | 556 | 0.0 | – | |
| MobiDBLite | 513 | 554 | 42 | - | – | |
| MobiDBLite | 530 | 545 | 16 | - | – | |
| MobiDBLite | 592 | 623 | 32 | - | – | |
| MobiDBLite | 592 | 627 | 36 | - | – | |
| ProSiteProfiles | 665 | 763 | 99 | 21.961 | ||
| Coils | 667 | 694 | 28 | - | – | |
| Pfam | 669 | 759 | 91 | 8.6E-34 | ||
| Coils | 699 | 772 | 74 | - | – | |
| Coils | 848 | 875 | 28 | - | – | |
| Coils | 979 | 999 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Myosin binding | Interacting selectively and non-covalently with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments. |
Expression pattern of LotjaGi1g1v0092400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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