Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0098100 |
| Transcript ID | LotjaGi1g1v0098100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | hikeshi-like protein; TAIR: AT1G66080.1 hikeshi-like protein; Swiss-Prot: sp|Q568T4|HIKES_DANRE Protein Hikeshi; TrEMBL-Plants: tr|A0A0L9UWY2|A0A0L9UWY2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0098100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:14959390..14962137) extracted from Lotus japonicus Gifu genome v1.2.
AAACAATCTACTAAATCTATTTTATTTTTCACCTCTTTATCCCTATTAATTTTTCTCTTCTCTATTATTCTCCTAAACCA AACATACCCTATGTACTGTGTCTGTGCTGGACATTAGAGTTTGCAAACATATCTTGGAGTCAAATCCCTCCACTCCAACC AAATTACCAAAATTAGATTCCATGATAACCTAGAATCTAGTTTCTTCCAACACAAAAACAAAAAGACCTATCTATCCCCA CGTATATCCAGAATCTTCTAGACCACGCAGGAAGATGCTTCTTTCCCTTTGCACCCTGTACAATGAGAAAGAAGAAACAC TTCAAGGTTTAAGTAACACCCACTTGCTTGTTCAATTTCCCAGCCCCAAATTCTAATTCTTCAACCACAACAGAAACTGC ATCAAAATTTCAAAATGTTTGGAGTAGTTTTCCCAAATCGAAGCTTCCCAATCGACATCTCAACCTTCGCTCAAATCGAC ACCTTCCACTGGATCCTCGACATGAACCATTTCGTAGGTAAGCACCATAAACAACACCCATGCGCATGTTAGCATCTTCC ACTTCCAATTAACCTAACTTCTCATCACCCCCTCTAACGTGCGCAGGTGAGGCGTACGACCAGGTCACCGAAGTCTGCAT CTTCCTCCTCAACGGCTTCACGCTGCCACCGGAGAAAGCCCTCGCCGTCTACGTCCAGTCACCAGGCTCCCCCTTCGTCT TCTGCGGCGCCGTCACGCTCGCCCGCCCCTCCGCGGTGCTCACCCTCCCGTGGCCGGAGCCCGGCGCGGGGTCCGGCCAA CCTCCGCAGCTGACCGCCGACGCGCAGCCGCTGTCAGCGAAGATCGGGGTGTCGGTGGAGGATCTTGCAACGCTGCCGTC GCTTGACGTCGCCGGGGAGAAGCGGATCGAGCGGTTGGCGATGAAGGTGGGTGAGAATTTGTTCAACTTCATGCAATCGT TCTGCGGCGTTGATGGGTCGAAGTTGATTGTTCCGATGGATATCTTGGATCGGTGGTTCATCAAGTTTCAAGAGAGGGCC AAGCGTGACCCTGAGTACTTGAAGGGTTTCGCTTTGTAAGTTAAAGTTTTCATGTTTTTCTTCTTCCCCTTTTGAATTAG ATTTTGGAAACTTTTTTTTCAATGTTGAGAAATGAATTGATAGTGAATAGAAAAAAATGGGTCCTCTTTGTGTTGTGATT CTAATATGGATGTGTGTTTTGTGGAAAAATTGCATTTCAATTTATGTTCATGATGTGGTGTTCTGACTGAAAGTAACAAT GAGGGAAGAGATGGTGGATAGTTTAGAACATGGTGATGGTTCATTCTACTTCTTCATGTATATTTGGATACAATTGAGTG CAGTGTGAAGAAGAGATTCATCTCTATTAGCTTTTGTTTGTACTAGTGTCAACTATTATCCAAACATAGTTATTTTTTTT TTCTTTTGCAAGATTTGAATTTGAAGTGTGTGTGTGTGGTGTTTTTGTGATAGTAAATGTTACTAGAGAGGTAGACACTG ATAACATGAGCTTTGTTGCTGAAAGTTGGTCATGAAAGTTATTGTTTCGAACTTCAGGACAGGGAAATGTGATCCATATT TGAAGATTCTAATAATAATTTTTATGTTGTTGGTGGTGGGTGATTGCTGTCTTGGCGCGCTCCCCCGGATGGGTGGGTGG CCCTCAACGTGGATGGATCGTCACTTGGTAATCCGGGGCCGGCTGGAGCCGGTGGTGTTGTTCGTGATACAGCGGGAAGG TGGTGCGTGGGGTTCTCAGCCTTTGTAGGGGTCTCAGAGATCCTGAAGGCTGAGTTGTTGGCCATTCCTTATGGGCTTCA CCTTTGTTGGGAGCGTGGGTTCCGTCGGATTGTGGTCTTCTCTGACTCGCAACATGCCTTATTGCTCTTGGAGCATGGGT GCGGGAGGTTTCATGCTTATGCAGCTGTTTTGGGGTTGATTCATGAGCTGGTGAGTAAGGATTGGGTTGTGAGGTTTGAG CACATCCGTCTTGAGGGCAACGCAGTTGCGGATCTTTTGGCTAAGGATGGTGCTCGCGGGTCTTGTCGGATGCGTTGTTT GGATTCTCCTCCGGCAGAAGCGGCTCCTCTGCTTGCGGCTGTGGCACTCTCTTTATGAGGCGCTAGTGTGTGGTCCTTTT TTGCTTTTCTTTAAGCTGTTATGTACCCAAAAAAAAATATAGTTAATACTTGTTGTGTATGGTACTAGATCATGTTTTAG CTTTTAAAACAAGAATTCTACTTTTAATAGTGGTGCTGCTGATACATTTGATGTAACATACGAGAGTCAAATGGTGAATG TTTAGAAATCAATTATGAGAAAAAGTGAGAAAAAGCTTACGTGAGCAGCTTTTGTTGAGAATTCAAGTGAGTTGAAGTTT CATATTGATTAAAAATGAGTGAGGTGAAGACTTTAGTAGAGATGTGACACATAAATTTAATCCTTAATGTTTTGATATTT TTTTGAACAATGGTTCCATCAATTGAGCCCGTTACGGTGGATCCATGATTCAAACTGGTTGGGCTCATTGGTTCATTTGA TTTTCGGCCTACAGGCACCATCGTTCATTTATAGTGTGTTTGGTTTTAGAAGAGAGAATGAGAAGATAGAATATGAGAAA AGAGAAGATAAGAAGAGAGAAAAGGGTGATCAAATCACATGGCTTCATAAGTTTGTAACTAAAATTCAAAACTTTATTTT GAAAATTTTAAGTGATATGATATCAAAC
CDS sequence (LotjaGi1g1v0098100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGGAGTAGTTTTCCCAAATCGAAGCTTCCCAATCGACATCTCAACCTTCGCTCAAATCGACACCTTCCACTGGAT CCTCGACATGAACCATTTCGTAGGTGAGGCGTACGACCAGGTCACCGAAGTCTGCATCTTCCTCCTCAACGGCTTCACGC TGCCACCGGAGAAAGCCCTCGCCGTCTACGTCCAGTCACCAGGCTCCCCCTTCGTCTTCTGCGGCGCCGTCACGCTCGCC CGCCCCTCCGCGGTGCTCACCCTCCCGTGGCCGGAGCCCGGCGCGGGGTCCGGCCAACCTCCGCAGCTGACCGCCGACGC GCAGCCGCTGTCAGCGAAGATCGGGGTGTCGGTGGAGGATCTTGCAACGCTGCCGTCGCTTGACGTCGCCGGGGAGAAGC GGATCGAGCGGTTGGCGATGAAGGTGGGTGAGAATTTGTTCAACTTCATGCAATCGTTCTGCGGCGTTGATGGGTCGAAG TTGATTGTTCCGATGGATATCTTGGATCGGTGGTTCATCAAGTTTCAAGAGAGGGCCAAGCGTGACCCTGAGTACTTGAA GGGTTTCGCTTTGTAA
Protein sequence (LotjaGi1g1v0098100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFGVVFPNRSFPIDISTFAQIDTFHWILDMNHFVGEAYDQVTEVCIFLLNGFTLPPEKALAVYVQSPGSPFVFCGAVTLA RPSAVLTLPWPEPGAGSGQPPQLTADAQPLSAKIGVSVEDLATLPSLDVAGEKRIERLAMKVGENLFNFMQSFCGVDGSK LIVPMDILDRWFIKFQERAKRDPEYLKGFAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 123 | 123 | 3.1E-15 | ||
| PANTHER | 1 | 189 | 189 | 1.3E-66 | ||
| Pfam | 133 | 186 | 54 | 1.3E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0098100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…