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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0104100 |
| Transcript ID | LotjaGi1g1v0104100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | B3 domain-containing protein; TAIR: AT5G58280.2 AP2/B3-like transcriptional factor family protein; Swiss-Prot: sp|Q9FHB2|Y5828_ARATH Putative B3 domain-containing protein At5g58280; TrEMBL-Plants: tr|K7KAC9|K7KAC9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0104100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:16081205..16086477) extracted from Lotus japonicus Gifu genome v1.2.
GAGGTAACAAAAAATTTGAAAATCAAATTGCCACCTTTTGCTCCAGCTTTCTCAGTCCACTGTCAGCTTCTTACAAGGTA ATAGTTATGACCCCATTTTTTCTGCTTTTCTTAAATCTCTTGTGCTGGATTTCTTCAACCTCTCTTCCTTTACTTTTTCT TTCTTATAAGCATTAAACCTTCAAGTTGCAGTCTTCCTTACATTTCACGAGCTCTCAAGGTATAAAAAACTCATCTTGCT CAAGCCCAGAATATGTAAAATCAATTTTTTTTGAAATGAACCAGCTTTTTCACAATAAATGGAAATGGGAAAACGAAAAA GCATGCACCTTTCGACTTCTAGGACCTGCTGCCATTGAGAAGCATTAACTTTTTGTCATTTCAATTGAGAATAGTTAATG GGTCTGTGTGAACTGTGATGCTTCATTTCTGCAAATAACTGCATTTTCTCTTGAACCATCGTCTTCCTCCAAGTATGCAT GTATATATTTGTGAAATCTAACATCAAATTATACCATACTTGATTCCACTAGCAGATGGCGAAGGGATGCACAACCAACA ACACCTATGAAGAGGCTAGAAAGCAAAGGCTTGAAGAAAACAAGAAGAGGTTTCAGGTAATCAGCACTTTGTTACAGCTG ATAATTTTAATATTAGTGGCCATTCTTGTAGTTTTGTTTATATAAAAGCTTCAGCTTTGTGGGTATAGCATATATGCATG TGTAAAAGCTAAAGACTTTCTTTTATGTTGGTTGAAATGTAACTTCACTTTTTTGCTCTCAAGGATTTGGGAATTTCAAG GATCTCAAAAAATTTGACTGAAATCGCAAGCGCTGCGAAGAAAACACCTAAAACCCCGGTAAGCTTCTATTTGGTTTGGT TTGACTCTGAAGAAAACAGCATTTGATTTCATTTGACTCATTTTGCCCTCTTTCCTTGTGCAGCCTCGTCTTCCTAAGCT GAAATCAAATATTGATGGTGTGGTGGAACCTAGGCGCTCTTCTCGTGTGCGAAACCCAGTTACTACATACCGTGAAGATG TAAGTAATATTGTCTTTCAAATAATGTAAAGAATGAAAAAAAGCTAGTGATTCAACTTGGGTTGGATGATAGGATACATA ATAGCATGTTTGGGGACTTAAACGTGGAAGCAAAATCAATTTTTGAGTGAAGTAGTGTGGGAGAAACAACTCCTAGTAGC TTTCAGTGCGCATAATTGATTTTGAGTGAGTAAAACACAGATCACATGCTATAAAGCTGGTATGGTTGGATAAATAACAA TCACAAGTCTTATCCCACTAAGTGAGGTCGGCTATATGGATCACCCGATGCCATTGCGCTCTATCATAAACATATTAAGA TATTGGTTAGTTTTACATTGGCTGCCGAAGGCTTAACACAACCTTCCTCCTTTACCCTTAGTACTGGCTATGCAAGCATA TAGTAGAAAAATATATACTAGGCACATGTGCTTGAATTTGTTTGTTCTTTCTATATCTCTGTTTGATAATTAAGCATTCA AGTTTGTTGAGTTGTTATTATTATTTTAATTTTAAAATCCTTGATTCTTGTCTTTAAAGATTTACTCTTCATTTCCAATG TGATAGTCTAGCGGAAATGTCTACATGACAGTACATTCTTTCAATTACAGGTCAACGCAGACCTTCCATCTTTGCGGAAG AGGTCAAGATCAAGACCATCATCATGGGAAAGGTAGTTAATCACTTACTTAAAAGCTAATCTATATTGCTAATGTTATAC TAATAAAAAGTTTATGGGACTCTTAGTTACGTAGCAAGGCCACTAGATGAAATCAAAGTAGCAACAGAAAGAGAAAGAAA TCGTGCTCTGGACGCTGCAGAGGCTTTCCAAATGAATTTACAGACTTCCTATCCATCATTCGTCAAATCAATGGTTCGAT CTCATGTTTATAGCTGCTTTTGGTTGGTAGGTTTCAGCTCAGAAAATCTTTATCTATGGCCTGCACATATAGCTGTTTTT GGTTCTTTTCTGTTGAGATTAAGTAAATGTACTCCTAATATATTATTTTCATCTCTATTCTACTAGGGTCTTCCATCTAG ATTTTGTGAGGAGCATCTCCCAAAAACTCTGTATGACATGATTTTAGAGGATGAAGATGGTTCAGAATATGAGGCTGTTT ACATTGGGAAAAGAAGTGGGCTTAGCGGAGGCTGGAGAGCATTTGCATTGGATCATAAGCTGGATGATGGTGATGCACTT GTTTTTGAACTGGTTGAGGCCTCGAGATTTAAGGTAATCTATGTTATAAGTTCTCTTGTAACTCTCTTTTTGCTTCTAGG GTTGTTAATACTTGCCATATCATCATGGATTGAACTATAACTAAAATTAACTTGACAAAAATGTCAGATGACTCACAAGA TAATGAATATTCTTTGATATCTGTCAATGGTTTTATGTTTGAGAAATGCACCATCAAACATCAAGGTTGGGGTTAATGTG TACTGGTAAAAGTAAAATTTAAGTTTGGGTTGTTAGAGGTTACCAATGAACTTTGAATTAAAGTATTCTTGATTTATTTA TAACATTCACATTTACTTGAGTTTTTCTTGTTTCCGAATGTTATTTTCACAATAGTTCAAATTTTCAATAGTTCAACTCT TGCAGAATGGGCTGCACCTTCCTTGTCACAACCACCAGCCTTTTCTAATTGTTGCTATTTGTCAATGACCTTTCTTCGCA TGCTTATCGTCCTTAGAATCGACCAAACAACTCATACATCTTCCTTGCTGCACTATTGCAATGCAATGAGTGAGAGTCAG AAACCACCTCCACGCTCCACCCAAGATTCACAATCTATCATTTTATTTTTTCAAACTGTACCGATTGAAACTTCATTCTC CATCACTGTATCTTGGCTGTATTTCATATTGTTCCTTCTTTGCTATCTTTGACTGGATTCTTCATCCATCTTATCTGTTG TAATGTTTCTTTCACTTCTCAGTTCCACGTTATTGATTTCTACTCCATCTTTGTGATTATAGTTCTTGATTTTCAAACCT CTATCTCTCTTTTCACAAATTCCACCAATTCCTCACCTTTATGCAAAAGCTAAGATACCTTTGAGCATTGCCCTCTCAAA AGTCTCTCCATGTGGCCAATGGATTACTAACCTCCTATTATTGGTACTGGTGATAGGCATGTCCTTCCATTGCTTCCACG GCCAACTGTAATTTCCCTTCCTTCTTTCCTTTCATTTCCACGTGTTGCTTTAGGTGGCTTCAAATTGTTACTACAGGTGG ATTAGGCACCCATGCATTATGCACATCATTTCATTCAAAGATTGGGACCCCTAGAGTTACTAAGCCCTAGTATGGAAATA GTGAAGTATTGTAAAGCACCAACAATACGCCGTATAGATGGATCAATAAATGGAGAGCCAACAGATTTAGGGAGCATAGG ATTAGTGACCATTGGCAAGGAGAGGGGCCTGTAGTCCCATATGTGTCTCACAGAGAGAAGATCCAACATATTTGCTTTGA ATTAGGAGAAGTGAACCATTAGAGAGGTTTTTGATTTCAATTCAGAGGAAGTAGTCAAGGGTGCCAAATTGCTTGACGGC AAAGACAGTAATCCATTGTTAAATGACTTGATGGAACTAGAGGTGATGAGCTCCTTATTACTCTTTTGACATCAACATAA ATGAGAATGTTAATGACTACTGTAGTGGGGCAGTAGATGAATAAGGAAGGATCACAATAGCTTGCAGCAAAGCCATACTT AAGTAGTTTAGACCAAAGCCAAACTTAAGTAGTTTAGACCAAAGCCTGTCAAACATACACGTGGCCAAAATCAACTAACC GCTTATTGCTTCCATCAATATCATCAAGTAGAATGGGACTAATGACATCATTTCAGGTGTTTAAGAGTTTGGTTATACTT AATGTTAACCGTGTCTTGCAGTTTTTGATGCTTAAGTCTACTCTTGTTTGAGTAAATCTATATTATAATTTGAAAAAACT TGTTAGTTTCACAATCATGTTAATTTAATTAACTTACCTGCTCAAAAGATCTCCAATCACGCTCAGCTTTAGGTTGATGG AAGAACTAGGATTTATTGTTAAAAACAGAAAAATAAACTATCGAGTGGACAATTACTATGGTTAATATCTCCATGTTGCT CTAATCTTCTGTTACCACTCTTCCTCTTAATGGATGGTTTTCTAATAAGTTCCCGAATGTGTTTTTATGGACAATATATT AGCAATAATATTGAACCTAACATGGTTTGACTGCAGATTTATATTTGTAGAGCATTTCCAGAATCAGTTGAAGATGAAGA GGATACTTTGGAGGAAGAAGGAACAACAAGAGAAGCTAAAGCAACAAAAGTGAAAAAAGCTGCTAGTAATGCTGAGTCCA AATCAAACAAGTCAAAAAAACCAAAACAGGCCATTGTACATGAAACTAAGGAATCAGCAAATCAGAATACTTTGAAGGAA GAAGGAAGAACACGTGCAAGCAAAAGACTTAAAGCTGCTGGATCTAGTGAATCAGAAGAATCAAACAAGGTAAAGAAGCC AAAACAGGCCATCATGCACGAAACTAATGAATCAGAGAATTCTCAGGATTCTCTGCTAGAAAGTAGCATTGACAATGAAG TCAAACCAGCTAAGAAAACTAAATCTTCTCAGAAAGAAATGAAAAAGAAATATACACTGCCTGTTACTGGTGAATCAAAA GGGGAAGCACCAATTGAAACTATGAAACCAAAGGAAGCTGTTCTTTACCAGCAAAGTGAACTTGGTGACTCAGGTAAGGC TGAACAGCTTCTTTTGGAAAATGAAGTTGTCAAACCTAACCCGTGCAAGAAGAAAGAACTTCAGGATGCTGAGAACGAGT TAAAGAAGGTTGAGCCAATTGAACAAGCAAGTAAAAGGCCTAGGAAACAACGAGCTGTGAAGCTTTTCAGAAAGAAAGTA TAGGCTTGGAGCTATTAGCTGGTAAAGAAAGTTATCAAGAAATGCATGCATTTATTTAAGGATTTGTGATTGACTTTGGA AGCACACAATGTTGTGTTAGGATTTCTGCACTTTCATATCTGTTAGTGGACAAGAGATGTTAGTTAGTCCATATTAAGTA ATGTGTAAGCTTCTATTTTCCCTTACTAAAGGGTATATATTAGTAGGTATGGAAGTTTTGATACATTAAAAACTAATGTG TAATCGTGATCCTTTCTAGTATAATTACTACAAGTTGGTTGAAGTTACACTATGATCTTTGAATAATTTGAAC
CDS sequence (LotjaGi1g1v0104100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAAGGGATGCACAACCAACAACACCTATGAAGAGGCTAGAAAGCAAAGGCTTGAAGAAAACAAGAAGAGGTTTCA GGATTTGGGAATTTCAAGGATCTCAAAAAATTTGACTGAAATCGCAAGCGCTGCGAAGAAAACACCTAAAACCCCGCCTC GTCTTCCTAAGCTGAAATCAAATATTGATGGTGTGGTGGAACCTAGGCGCTCTTCTCGTGTGCGAAACCCAGTTACTACA TACCGTGAAGATGTCAACGCAGACCTTCCATCTTTGCGGAAGAGGTCAAGATCAAGACCATCATCATGGGAAAGTTACGT AGCAAGGCCACTAGATGAAATCAAAGTAGCAACAGAAAGAGAAAGAAATCGTGCTCTGGACGCTGCAGAGGCTTTCCAAA TGAATTTACAGACTTCCTATCCATCATTCGTCAAATCAATGGTTCGATCTCATGTTTATAGCTGCTTTTGGTTGGGTCTT CCATCTAGATTTTGTGAGGAGCATCTCCCAAAAACTCTGTATGACATGATTTTAGAGGATGAAGATGGTTCAGAATATGA GGCTGTTTACATTGGGAAAAGAAGTGGGCTTAGCGGAGGCTGGAGAGCATTTGCATTGGATCATAAGCTGGATGATGGTG ATGCACTTGTTTTTGAACTGGTTGAGGCCTCGAGATTTAAGATTTATATTTGTAGAGCATTTCCAGAATCAGTTGAAGAT GAAGAGGATACTTTGGAGGAAGAAGGAACAACAAGAGAAGCTAAAGCAACAAAAGTGAAAAAAGCTGCTAGTAATGCTGA GTCCAAATCAAACAAGTCAAAAAAACCAAAACAGGCCATTGTACATGAAACTAAGGAATCAGCAAATCAGAATACTTTGA AGGAAGAAGGAAGAACACGTGCAAGCAAAAGACTTAAAGCTGCTGGATCTAGTGAATCAGAAGAATCAAACAAGGTAAAG AAGCCAAAACAGGCCATCATGCACGAAACTAATGAATCAGAGAATTCTCAGGATTCTCTGCTAGAAAGTAGCATTGACAA TGAAGTCAAACCAGCTAAGAAAACTAAATCTTCTCAGAAAGAAATGAAAAAGAAATATACACTGCCTGTTACTGGTGAAT CAAAAGGGGAAGCACCAATTGAAACTATGAAACCAAAGGAAGCTGTTCTTTACCAGCAAAGTGAACTTGGTGACTCAGGT AAGGCTGAACAGCTTCTTTTGGAAAATGAAGTTGTCAAACCTAACCCGTGCAAGAAGAAAGAACTTCAGGATGCTGAGAA CGAGTTAAAGAAGGTTGAGCCAATTGAACAAGCAAGTAAAAGGCCTAGGAAACAACGAGCTGTGAAGCTTTTCAGAAAGA AAGTATAG
Protein sequence (LotjaGi1g1v0104100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKGCTTNNTYEEARKQRLEENKKRFQDLGISRISKNLTEIASAAKKTPKTPPRLPKLKSNIDGVVEPRRSSRVRNPVTT YREDVNADLPSLRKRSRSRPSSWESYVARPLDEIKVATERERNRALDAAEAFQMNLQTSYPSFVKSMVRSHVYSCFWLGL PSRFCEEHLPKTLYDMILEDEDGSEYEAVYIGKRSGLSGGWRAFALDHKLDDGDALVFELVEASRFKIYICRAFPESVED EEDTLEEEGTTREAKATKVKKAASNAESKSNKSKKPKQAIVHETKESANQNTLKEEGRTRASKRLKAAGSSESEESNKVK KPKQAIMHETNESENSQDSLLESSIDNEVKPAKKTKSSQKEMKKKYTLPVTGESKGEAPIETMKPKEAVLYQQSELGDSG KAEQLLLENEVVKPNPCKKKELQDAENELKKVEPIEQASKRPRKQRAVKLFRKKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 314 | 306 | 2.1E-92 | – | |
| PANTHER | 9 | 314 | 306 | 2.1E-92 | – | |
| Gene3D | 116 | 234 | 119 | 1.1E-26 | ||
| SUPERFAMILY | 138 | 232 | 95 | 7.26E-22 | ||
| CDD | 141 | 232 | 92 | 1.50853E-27 | ||
| SMART | 143 | 234 | 92 | 7.8E-25 | ||
| Pfam | 143 | 232 | 90 | 1.7E-17 | ||
| ProSiteProfiles | 143 | 234 | 92 | 12.421 | ||
| MobiDBLite | 240 | 381 | 142 | - | – | |
| MobiDBLite | 248 | 328 | 81 | - | – | |
| MobiDBLite | 329 | 344 | 16 | - | – | |
| MobiDBLite | 347 | 370 | 24 | - | – | |
| MobiDBLite | 433 | 455 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi1g1v0104100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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