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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0106300 |
| Transcript ID | LotjaGi1g1v0106300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | B3 domain transcription factor; TAIR: AT2G30470.1 B3 domain-containing transcription repressor VAL1; Swiss-Prot: sp|Q8W4L5|VAL1_ARATH B3 domain-containing transcription repressor VAL1; TrEMBL-Plants: tr|G7K0T7|G7K0T7_MEDTR B3 domain transcription repressor VAL2; Found in the gene: LotjaGi1g1v0106300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:16547775..16554606) extracted from Lotus japonicus Gifu genome v1.2.
AGTGAAGTGAGAACAGAACAGAACCGAAAGCCAGTTTATAAGGTAACACTGTATTGTTGTTGGTGCGTGTGTCTTCAAAC TATCTTGCATGCAATTTTCACACACCCCTTTCTCTCTCTACACTTGTTATATTCACTCCTCCTCTGCATGCACTTTCTCT CTCTAAATTCTCACACACCCTCTTCCTCGATCACCTTAATCGCCGTTACCATGTCGATTTCCGTTACTCTTTCTCATTCC CCTTGAACCCCTTCCTTCTCTTCTCACCACCATTCCATCAATTCACGTCAAAATCATCTCTCTCTCTCTGTGTTTGCATG GTTGCAGTTCATAGCAAGGACCACGACAACAACGTTTTTTTCATTTGCAGGTTCGTTCTGTTCTTGTTCTTGTTCTTGTT ATCTCACCGTAAAGTTTGAATCTATTTGTGTTTGTGATGATCTGATGATCCATGCTTTTTTTTTTTCAATTCTTATCTTT CTCTTGATTTTGTGTTCCGGTGTGAAGTTTTTGGTGATTTTTAGGGTTTAAGAGAGGGTTTGACTTGCTTTGGATTTCAA TTCAATGGGGGATGGAGCTTGCATGAACCAGTCGTGCAAGGGTGGTGGTCATGGCCGTGAATGGAAGAAGGGGTGGCCTC TGGCATCTGGTGGATTCGCCAGGCTCTGCAACAAATGCGGGTAGATTTCATTCCTTTGCATCATTTTTGTTTAATTTCAG TTTATTTTAATTTTGGGTTTTGACTTGCTTCTTGTCCAATGTTCAATGCTGTGACTTTGATTTCTGAATCTGTGTTTTCT GAATCTCCTGCTGAATCTTTCTGTTTGGGGGTGTTGTGTTTCTCCTGGATAGTTTTTCACTTTTTTGGGCTTTGACTTGA GTCTTATGAGTACAAATTGAGTTTCAACGCTTTTTCTTTGCTGGGGTTTCAACCATGTCTTGTGTTTGGTTCTGTCTCCA TTAATGGGCATGGCTATTGTAAATTAACCGGTTGCATTGTTGGCTCTGTTCATAATTGCATAATTCAAGAAATTTTTGTT GTTGTTGATGCAATGTATGCAAAGGAGCTGCTGCTCTCTAACAATAGGTCAAACCAGATTCTTAAGTTTGTGTGTGTCAG GGTTCTGAATTGCGGTCGTGGTTGTGTCGCAGAATGGGGCTGCGATGCTGATGCGAGGACTCCAAAATCCTTTATGTTGT GGCTCCGATTGCAGTTGCGGACCGCAATTTGAAACCCCAGTGTGTGTCTAATTTATAGTTCACAGATTAAAGCGTGGGGC AGTATGTTCAAAAGTATAATCAGAGCACTTTGACCTGTTTTTTTACCTTTTTGTTATATCTAAGCTTTTTAAGCATGTTT GATCATCATGTTATGAATGGAAACAATGAAATGGTATTTCTTTGGATGAGGATCAATGTGGATGACTTGGGTATTACTGC AGTGCTCACATATCCATGCGCCTTTTATCCAAGTGTTTGTATGTTGCAAAATCTAAGCAATTGTTTTTTCTGTAATGATT TATCAACTGCACACTTTGCTCTCCGGATTTATGAGGATATTTTCTCCTAAGGTTTTTTACTAATTCAAATGGAACCTAGG TTTAGTTTTTTTGTTGTCGGGAAGTTATAGGACAAGCAGTGTTAATCTATATTTTCTCTTCTCCTCCCTCTTCTACACTT GTAATCTTGCCAAGTATTTTTTCTGGTAATAATTCATATATTGGTTCTATTTCCTGCTTGCAAATCCTTAATGTGTCACT TTTGCGATTTAGAATTGCCTACGAGAGTTTGATTTTCTGTGAGGAATTCCACAATGTTGAAAGTGGTTGGAGGGAATGCA ACCATTGCAAAAAGGTAAAATGATAATATATTCTTCTGTTTCGTTTTGTTTTTGTTTCATTTCACTTCAAATCCTGTCTT CCTTAGACATTGAAATCTATTATTTGACGCTTTGCAGCTTGTCCACTGTGGATGTATAGCATCGAGGTCTATGTTTGAGT TTCTTGATTATGGCGGCATTGCTTGTGTGAACTGTCTTAAGGCTTCCCAACTTCGTCAGGTAAGGTTAATCTAAATATTG GTTTCTACATGATGATTCCAAGCCTAAAGTTTATTTCCTTTGTATTTAATTTTTGATTTCTGTTAATGTTTTAGTTTCTC TCATGTTGTTGCAGTATTTTACATTTTGGATCACACATCTCTGCATCTATATGTCTTATTTTATAAGGACCAATTAGATG CCACCTATAAATAAACGAAAAATATAATATCAAATATACCTTTGAGTGACTAATACCTATACTTACAGTATTATAACTGG TCTCATTACTTGTTCATTTCTTGATCCATCGTTGCTTTTGCCAGAGTTAGTTTTCTAATTATGTTCAACAAGTTGTTTCT GCTTGCTTGTTCTTAGTAGTGATTCTGTGCCTTTGTATCCTGTTAGCACACTATTTAACCATCCACTTAGACATGTTATG CTCTTTAGTTCTCTGCCACAGACACAGAAAGTTCACTGATTCCCGGTATTAAATTTTTTATACAGATGTGGGATACTGAA AATTCTTATGGATCAGTTAGATCAACCACAAATAATGCAAGTGATGGACATGCTGAACTTAATGGTAGAGCAATGGGGAA TAAGACTGGGGAAGGAAAACTTGTGCATTTGTGTGGAATTTCTGAAGCTACTGAATCCAGCGGCTGGGCTCAAGCGCAAA GAGATGGCATACTCTCATCAATTGGTCAGAACAGCCAAGAGTTTAAATTTCCGTTCAGGGAAGAGGATACAAGATTTTCA AATGTGCTGAAACAGTCTAATCATTCATTAACGTTTACTACAATAGAGAATAAAAGACCAACATGGGAGTCTAAAAACAT GCATGAATTACTTTCACTGACATCGGGGAATTACACCTTTCCTTCTGCCACAAAGATTGTAGAAGGCAGACATGAGGGTA AAACTACTCAAGGACCTCCTCCCTTACATCAGGGGAGAACTTCTTACCCTATATTGCCTAAACCATCAATGACTGGGCTT ACCATGAATCTTGAAAGAAATAAAGGAATGATTTCTGAGGCACGCACCCCCCGGCCACCTGGTGAGTGGAGAGGCAAAAG TTTCTTACTTTCTCGGTACTGGCCCAAGATTACTGATCAAGAGCTGGAGCAATTATCTGGGGAGTATCCTTTTATATTTA TTATTTTGGTCTATTACACATACACATTAAACTAATACAAAGTTAATTCATCAGAAGTTTTCTTTAACGTTATTATCACA GTTTGAAATCTACTGTAGTGCCTTTATTTGAGAAGGTATTAAGTGCCAGTGATGCAGGTCGAATTGGTCGTCTTGTTCTC CCAAAAGCCTGTGCTGAGGTATGCTTAGAATCTTATTAATTTGATGTTTATCTTTTTATGTATACAGGATTCTTACAGCA CATATAACAACTTCATATATGATTTTCAGGCTTATTTTCCTCCTATTTCGCAATCAGAAGGTATTCCCTTGCAGATCCAA GATGTAAAGGGGAATGAGTGGACACTTCAGTTCAGATTTTGGCCCAATAACAACAGTAGGATGTATGTACTGGAGGGTGT AACCCCTTGCATACAGTCCATGCATCTAAGTGCTGGTGATACCGGTATACACCAATCTATCAAATGAATTGCTGCAAATA CCTATTTCCTTACCATTTCCCACGTTTATTGAAATTTATTTGGCATCTGCTTCATGTCAACTTGTTATCAAAGTACATGT GTTGATGGAAATAATTATTCTTTTTTATTTCTTTGTTTGCAGTCATCACTACATATGACCCCTAGATAGACTATAAGTTT TGGTCTTTATTATTCGGCTGTTCTAAGAAGAGAATCCATGCCTTTGTGGATTTGGACCCTTGTGTGTAGTATTTGTTGTT TACTCTATCTAGTGTGAACTGTATATATGTATGGTATTGGTAATATGTTCTGCAAATAGGTAGTTCCTACTAATTAGTAT GATCTTTTTTTTTGCAGTGATATTTAGTCGGATAGATCCTGGGGGGAAAATTGTTATGGGTTTCAGAAGAGGATCAAAAT CTATAGATACACAGGTTGTGATATAATTTTCCACTTTACTATCTGTGTCCTCATCTTTAGATAGTACGTGTATATTCTTC TCTTCATTTGGTGAATATGATAGATGGTCATTATTGAAACAGGATGCCTCTACATCTGCTCATTCTAATGGCACTTCAAC AAAGGAAACAACCTTGTCTGGTGTAACTGAGAATCTGCACTCAGGAAGTAGTAATCCTGATCTTCTCCACTCAGCGAAAG GGAAAGGGGAACCTTACCCAAAGGGACATTCGGAACATCTATATTTGGAAACTGAAACTGCTGATGGGATTCAAACTGGA AGTTGTGAGGAGATGGTGAATAATGATTCTTTGCAGCAACCCATTTCAGTTTTAGAGAAGAAGACTCGCAATATTGGGCC TAAAACTAAGAGGTTGCACATTCATAGTGAAGATGCTATAGAGTTGAGACTTACATGGGAAGAAGCGCAAGAGTTGCTTT GTCCGCCGCCTAGTGTTAAACCAAACATTGTAACAATTGAGGACCAAGAATTTGAAGAATATGATGTAAGTGTGGTACTG TCAAAGATTTGTTTTATGGGTTTGGTTTTTCAAGGTGAATATGTCCTGATATAGTTTGAAGAATCATTTTCAAATTTCTT CTACCTGGCTAATCTTTGTGATTTCTGTTTCATTTCAATCAGGAACCCCCTGTTTTTGGAAAGAGAACTACATTCAATGC CTTCCCATCTGGGTAAGATTATCTGTATTGCATTTCAGCATTATATTTTTTTCACTAGAAAGTCTTTACTGCATACTAGC AGTTCTATTTATTTATCACTTTGATCATGCCTTCAAATTTGTTCAAACATATATGGTATTTTTGTGGATCAGATTTATTT TATGCAATGATATTACTTCTTCTGTTCAGTATATTCATAATCACTACTTTAGCTGTAAAACCACAGTGCGCTCTTGGAAA AACTTTTATGACTGCAGTTGTAGAAAGATCTATTATGACAGTCTATATGAGATATGTAAACTATTATCTTTAAATTACAT GTTTTTTTTATTTTTTCCTTGGAACTCATCCGTAATTCATATTTTAATTATTGTTGTAACTTAAATGGATGTAAGTAATA ATCTAATACAAATGTTTTTTCTATGCCTTTTGTAGTAATAATCAGCTTGGTATTTTAGTTGAAGTACTCATTCATCTAAG AAATTTATAGAAATAATGATCCATATATTTTCAATTCTATTTCAAATATGCAAGATGGTGAACATTACATGGTGTTTCAG AAAAGAAAAAAACATTACTTTGTGCTTTTAGACCTTCTCTTGACAACAGAGTGAGTATATGTTCTCAATTTCCTATCATG GACAATGGTTTTTCAGGTCTTCCCATTCTACACCAGAGCAGATGAGTACAAAGGAATCAGAAGATCTTCTCAGAACCAGC AAAGGTATTAACCTTCTATCTATATTTTATATAAGCTCTATATCTGTCAGGTTTGTCATAACACAGTTTGAGGTTGATGC TGCAGTACAATTGATTGAATGCTAGTTTTTTACATTACTCAACATTGTCCATATGTGTCGGTTGATTTCAGCACTGATAT TCCATTTTAAATTTTTCATTGATGTCTATGTTTTGATTCCAAAAGCTGTTTCTCTAAACATGGACATTGTGTGGCTTCAT TTCTATGAGGCACTAAAAGAATTTTTCTTTCTTGATACCATTTATTGGCTCTTTTGGTTGTAGAAATCTCCCTTGTCAGA CTGCAAATTTTGTTCCTAATTGCACCTTTGAGGATACGCGGTTTTGGCCCTATACTCGATTTTGCACTATTTATCAAATA TGCACTTAGTCTAGTTGATTCAACTCTACTTTTGTATTCTATTTCTCCTTGATAATAGTTTCTTGAACTCTCTGTCTGTG CCTGATCTTCCCCAGGTTCTAAAAAGCGAAAAACGGCGGACAAAAGTAAGTCAATCAAAGAGCGCAAGCCTTCAGGCTTA GGCCCTCTTTCCGGAGCAGCAGTTTCAGGAGATAATTCGGCTGGCCCTGCTCAGGCACCAGTTGGAGCCACCACCAAACA TCCAAGGCACCGCCCTGGATGTGTTTGCATTGTGTGCATCCAACCCCCAAGTGGGCAAGCGAGGCACGACCCTTCATGCC CTTGCCGCGCTTGTGATACTGTGAGGCGCCGGTTCAAAACCATGGCGAGGCGGAAGAAGAAACAGCGATTAGAACCTGAA GCAGGTACTTCCCAAGGAGGTAAAATCAATTACAGGGATGACTCAGATACCAGTGGTACATCAAGAGAAGATACTAGTCA CTTGGAGAATGAGGGAGGCCTAAGCAGAGGTTTGCTTGAGGTGGCTGAGTCTGGTGCAGGACAATTAGATTTGAATTGCC ATCCCAATGATCATGAAGATATGCAAGAGGATGGACAACAGGACTCAGCATGATTGGTCTTATTGAAACAACTGATTATT CTGCAAGGGAATACATGAATGCAAATGGTCTAAAACGTGAATTGTAAACTTCATGTCGCATAATTTAAACTTAATCTTTA TTTTGGAAGCAGGAAAGAAAACCAGGTTCACCGTCACATAACAGTATTTGCAGATTTATTCCTATTAAAATATGTAGTTA AATAATAAAATATTTTGTTGAGATTGTGGATTAGGCAATGTATGCTGATGAACCACATTAATTTTGTGATTTTGCGAGAT GTTTACTTATTTATCAATTATTTATTTTTCTG
CDS sequence (LotjaGi1g1v0106300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGGATGGAGCTTGCATGAACCAGTCGTGCAAGGGTGGTGGTCATGGCCGTGAATGGAAGAAGGGGTGGCCTCTGGC ATCTGGTGGATTCGCCAGGCTCTGCAACAAATGCGGAATTGCCTACGAGAGTTTGATTTTCTGTGAGGAATTCCACAATG TTGAAAGTGGTTGGAGGGAATGCAACCATTGCAAAAAGCTTGTCCACTGTGGATGTATAGCATCGAGGTCTATGTTTGAG TTTCTTGATTATGGCGGCATTGCTTGTGTGAACTGTCTTAAGGCTTCCCAACTTCGTCAGATGTGGGATACTGAAAATTC TTATGGATCAGTTAGATCAACCACAAATAATGCAAGTGATGGACATGCTGAACTTAATGGTAGAGCAATGGGGAATAAGA CTGGGGAAGGAAAACTTGTGCATTTGTGTGGAATTTCTGAAGCTACTGAATCCAGCGGCTGGGCTCAAGCGCAAAGAGAT GGCATACTCTCATCAATTGGTCAGAACAGCCAAGAGTTTAAATTTCCGTTCAGGGAAGAGGATACAAGATTTTCAAATGT GCTGAAACAGTCTAATCATTCATTAACGTTTACTACAATAGAGAATAAAAGACCAACATGGGAGTCTAAAAACATGCATG AATTACTTTCACTGACATCGGGGAATTACACCTTTCCTTCTGCCACAAAGATTGTAGAAGGCAGACATGAGGGTAAAACT ACTCAAGGACCTCCTCCCTTACATCAGGGGAGAACTTCTTACCCTATATTGCCTAAACCATCAATGACTGGGCTTACCAT GAATCTTGAAAGAAATAAAGGAATGATTTCTGAGGCACGCACCCCCCGGCCACCTGGTGAGTGGAGAGGCAAAAGTTTCT TACTTTCTCGGTACTGGCCCAAGATTACTGATCAAGAGCTGGAGCAATTATCTGGGGATTTGAAATCTACTGTAGTGCCT TTATTTGAGAAGGTATTAAGTGCCAGTGATGCAGGTCGAATTGGTCGTCTTGTTCTCCCAAAAGCCTGTGCTGAGGCTTA TTTTCCTCCTATTTCGCAATCAGAAGGTATTCCCTTGCAGATCCAAGATGTAAAGGGGAATGAGTGGACACTTCAGTTCA GATTTTGGCCCAATAACAACAGTAGGATGTATGTACTGGAGGGTGTAACCCCTTGCATACAGTCCATGCATCTAAGTGCT GGTGATACCGTGATATTTAGTCGGATAGATCCTGGGGGGAAAATTGTTATGGGTTTCAGAAGAGGATCAAAATCTATAGA TACACAGGATGCCTCTACATCTGCTCATTCTAATGGCACTTCAACAAAGGAAACAACCTTGTCTGGTGTAACTGAGAATC TGCACTCAGGAAGTAGTAATCCTGATCTTCTCCACTCAGCGAAAGGGAAAGGGGAACCTTACCCAAAGGGACATTCGGAA CATCTATATTTGGAAACTGAAACTGCTGATGGGATTCAAACTGGAAGTTGTGAGGAGATGGTGAATAATGATTCTTTGCA GCAACCCATTTCAGTTTTAGAGAAGAAGACTCGCAATATTGGGCCTAAAACTAAGAGGTTGCACATTCATAGTGAAGATG CTATAGAGTTGAGACTTACATGGGAAGAAGCGCAAGAGTTGCTTTGTCCGCCGCCTAGTGTTAAACCAAACATTGTAACA ATTGAGGACCAAGAATTTGAAGAATATGATGAACCCCCTGTTTTTGGAAAGAGAACTACATTCAATGCCTTCCCATCTGG GTCTTCCCATTCTACACCAGAGCAGATGAGTACAAAGGAATCAGAAGATCTTCTCAGAACCAGCAAAGGTTCTAAAAAGC GAAAAACGGCGGACAAAAGTAAGTCAATCAAAGAGCGCAAGCCTTCAGGCTTAGGCCCTCTTTCCGGAGCAGCAGTTTCA GGAGATAATTCGGCTGGCCCTGCTCAGGCACCAGTTGGAGCCACCACCAAACATCCAAGGCACCGCCCTGGATGTGTTTG CATTGTGTGCATCCAACCCCCAAGTGGGCAAGCGAGGCACGACCCTTCATGCCCTTGCCGCGCTTGTGATACTGTGAGGC GCCGGTTCAAAACCATGGCGAGGCGGAAGAAGAAACAGCGATTAGAACCTGAAGCAGGTACTTCCCAAGGAGGTAAAATC AATTACAGGGATGACTCAGATACCAGTGGTACATCAAGAGAAGATACTAGTCACTTGGAGAATGAGGGAGGCCTAAGCAG AGGTTTGCTTGAGGTGGCTGAGTCTGGTGCAGGACAATTAGATTTGAATTGCCATCCCAATGATCATGAAGATATGCAAG AGGATGGACAACAGGACTCAGCATGA
Protein sequence (LotjaGi1g1v0106300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGDGACMNQSCKGGGHGREWKKGWPLASGGFARLCNKCGIAYESLIFCEEFHNVESGWRECNHCKKLVHCGCIASRSMFE FLDYGGIACVNCLKASQLRQMWDTENSYGSVRSTTNNASDGHAELNGRAMGNKTGEGKLVHLCGISEATESSGWAQAQRD GILSSIGQNSQEFKFPFREEDTRFSNVLKQSNHSLTFTTIENKRPTWESKNMHELLSLTSGNYTFPSATKIVEGRHEGKT TQGPPPLHQGRTSYPILPKPSMTGLTMNLERNKGMISEARTPRPPGEWRGKSFLLSRYWPKITDQELEQLSGDLKSTVVP LFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLQIQDVKGNEWTLQFRFWPNNNSRMYVLEGVTPCIQSMHLSA GDTVIFSRIDPGGKIVMGFRRGSKSIDTQDASTSAHSNGTSTKETTLSGVTENLHSGSSNPDLLHSAKGKGEPYPKGHSE HLYLETETADGIQTGSCEEMVNNDSLQQPISVLEKKTRNIGPKTKRLHIHSEDAIELRLTWEEAQELLCPPPSVKPNIVT IEDQEFEEYDEPPVFGKRTTFNAFPSGSSHSTPEQMSTKESEDLLRTSKGSKKRKTADKSKSIKERKPSGLGPLSGAAVS GDNSAGPAQAPVGATTKHPRHRPGCVCIVCIQPPSGQARHDPSCPCRACDTVRRRFKTMARRKKKQRLEPEAGTSQGGKI NYRDDSDTSGTSREDTSHLENEGGLSRGLLEVAESGAGQLDLNCHPNDHEDMQEDGQQDSA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 776 | 776 | 9.0E-289 | – | |
| PANTHER | 1 | 776 | 776 | 9.0E-289 | – | |
| MobiDBLite | 236 | 258 | 23 | - | – | |
| Gene3D | 311 | 434 | 124 | 2.4E-28 | ||
| SUPERFAMILY | 320 | 423 | 104 | 7.85E-20 | ||
| CDD | 320 | 421 | 102 | 1.42895E-23 | ||
| ProSiteProfiles | 322 | 423 | 102 | 10.56 | ||
| Pfam | 322 | 421 | 100 | 3.8E-15 | ||
| SMART | 322 | 423 | 102 | 7.6E-21 | ||
| MobiDBLite | 426 | 478 | 53 | - | – | |
| MobiDBLite | 426 | 463 | 38 | - | – | |
| MobiDBLite | 570 | 660 | 91 | - | – | |
| MobiDBLite | 581 | 595 | 15 | - | – | |
| MobiDBLite | 596 | 611 | 16 | - | – | |
| MobiDBLite | 700 | 781 | 82 | - | – | |
| MobiDBLite | 726 | 741 | 16 | - | – | |
| MobiDBLite | 764 | 781 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi1g1v0106300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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