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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0109100 |
| Transcript ID | LotjaGi1g1v0109100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peroxidase; TAIR: AT5G05340.1 Peroxidase superfamily protein; Swiss-Prot: sp|A7NY33|PER4_VITVI Peroxidase 4; TrEMBL-Plants: tr|A0A151U0W7|A0A151U0W7_CAJCA Peroxidase; Found in the gene: LotjaGi1g1v0109100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:16995480..16998168) extracted from Lotus japonicus Gifu genome v1.2.
CAACGTGTGTATTGTAATGTGCATGTATATTTGTATTATATACCCATACGCTACAATTAATCACGATTATATCCAATAGT TGGTGAAATATTTTGTGCAATTCTTAATATGGGGGGATAGATTGGGTCAATGGTGAGCACATAAGAGTTGGTACATATTA TGACCTGAAATATTATATATGTGGATAACTTAAGCAAGTTAATTAACTAGGACCTAGTTGATACACTCTCCTTCTATATA AATGCTCTATCTAGCTAGAATCAAAAAAACAACATCTTAGCTCAAAACCTCATCATCAAGCATATACAGCAAAATGAATT CTCATCGCCAATCTTTTCTTGTGCTTGTATTGGTCACTTTGGCTACATTTCTGATCCCAAGTACCCTTGCGGGGCTCACT CCTGGTTACTATGGCAAAGTTTGCCCTCAAGCATTACCAATCATTAAGTCAGTGGTTCAGAAGGCAATTAATCGTGAACA ACGCATTGGAGCATCCTTACTACGTTTGCATTTCCATGACTGCTTTGTTAACGTGAGTTAGTCGACATATTTATGAAACA TGTTTTTACTATTAACAATTAGTATATATGTTATTTACAATATATTCATTATGTTAATAAATTGATTTGCAGAGAAACCA TTTTAATTTTATGTATATTTTTCTTCATCCATGGTGAATGATAGACAAAGCCTGTATAATATTTGAAATTCTATATATGT TAATATGTAATGCTCTATTTGTATCTTGTTATATATTTGTAACACATATTCTAATTGAAATAGAAACATTATGACTTTTA TTATTATAGTGTTGTACCCTAAACTAAACTAAAATGTCCATGTCCAAAACTATACAGGGTTGTGATGGATCACTTCTACT AGATGACACTTCTTCCTTCGTGGGTGAAAAGACTGCATTACCAAATTTGAATTCAGTCAGAGGATTTGAAGTGGTTGATG AAATTAAAGCCGCGGTTGACAGAGCTTGCAAACGTCCTGTGGTATCATGTGCAGATATCTTAGCTATTGCAGCTCGTGAT TCAGTTGCCATAGTGAGTTTTATCCTAATCTTTTAATCTCACACTTCTAGCTTTTTTTATGTTATTCAAACCACAATTTT ATGTTGAACCATGTTAAAAACTGATACAGCTATAACCAATGTTCACGTTTGATGTCTATTTCCATGTCTCCCTAATAAAA AAATGACATGTAAGGTTATAACTGTTATATATACGAATTTTGTTACTCACATGATCACAATCTTACTAGACATCATATGA GGAAAAGTCTTCATTCATGATTTAATTTTGGTGCTGTCTAGTGTCCCACACGTGTTCAGAGATCAGAGGTGGTGGATGTA ATTAAACATTACATCAAAATTACTGCAAATTAGTTGTGAGAATAAGTGATGAACTATTATTGTAAATTACTGTAAATGAA CTATTACTGCAAATTACTGTAAATTCTTAACTATTATTTTACAACTATTTTTTAAGTTAGAAACCTTAATTTACATGATT ACAACTCAAATGTTTATAATTACAAGTGGTGTACACCATCAGAACAAGTGATGAACGCTAGAAAGCTGATCCATGTTTTT ATGTTTTGAAATCAATTTGTAAAGGAACTTTTGAAGTTTGTAGAAACACATTATTTTAATTTTATTGTTTCACACAAGAC CTTCACTGAAAACTAACAACTTTTTCTTTTATGAACAGTTGGGAGGTAAACAATATTGGTACCAAGTGCGATTAGGCAGA AGAGATGCAAGATCTGCAAGCCAGGCGGCTGCAAATTCCAACCTACCTCCCCCATTTCTCAACTTCACACAGCTTCTTCC AGCATTCCAGGCTCAAGGGTTGGACCTTAAAGACCTTGTAGCCCTCTCAGGTGGCCACTCCATTGGACTTGCCAAGTGCA GTTCCTTCCAAGCCAGGATCTCCGGTGACACCAACATCAACCCCAAGTTTGCAGCCACTTTGCAAAAGACATGCAATGTT GGTGGGAATAGCAGTTTAGCACCACTGGACAAGACTCCTACAAAATTTGACACTAGATACTACAAGGACTTGTTGGAGAA AAAGGGTCTTTTCCATTCTGATCAAGAGCTCTTCAAGGGTGATGGTTCTGCAAGTGATAGATTGGTGTATCTTTACAGCA AGAGTTCTCATGCTTTTGCCAAAGATTTTGGAGTTTCCATGATCAAGATGGGTAACATTAAGCCTCTTACTGGGAAGCAG GGAGAGATCAGGTGCAATTGCAGGAAAGTCAACAACTACTAGAATTGCATATTTGAAGCCTGGATCACACAACTCCAGAA TGATTCATACAAAGTCTTGAAATTTTTTATAATTTAATTTCCATACAGTTTATTGTTGAAGAATTGTGGGTTCAAAAATA ATGAACCATGTTTAAGAGTCTGTCAAGCGTGAGATTTGCTGTTCTTTTTGTTGCTATACTATTATTAACTTGTGTTAGTT TCTTTTGAGTATGACTATTTGGTGATTGGTTTTTGCATAATTGTACTATGTTTTCTTTTAAAGAAATTGTATTATTAATT TTTTTTTTTAAAGTATTATTAAAAGTTATTCACTTTGTATCTTATAGCGTCACAATTATGATATTCTTATTTGAGTTGCT TAACAGATACTCTTATTCAAAGTCATACCGTATAAAATTTAAGTTTCAC
CDS sequence (LotjaGi1g1v0109100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATTCTCATCGCCAATCTTTTCTTGTGCTTGTATTGGTCACTTTGGCTACATTTCTGATCCCAAGTACCCTTGCGGG GCTCACTCCTGGTTACTATGGCAAAGTTTGCCCTCAAGCATTACCAATCATTAAGTCAGTGGTTCAGAAGGCAATTAATC GTGAACAACGCATTGGAGCATCCTTACTACGTTTGCATTTCCATGACTGCTTTGTTAACGGTTGTGATGGATCACTTCTA CTAGATGACACTTCTTCCTTCGTGGGTGAAAAGACTGCATTACCAAATTTGAATTCAGTCAGAGGATTTGAAGTGGTTGA TGAAATTAAAGCCGCGGTTGACAGAGCTTGCAAACGTCCTGTGGTATCATGTGCAGATATCTTAGCTATTGCAGCTCGTG ATTCAGTTGCCATATTGGGAGGTAAACAATATTGGTACCAAGTGCGATTAGGCAGAAGAGATGCAAGATCTGCAAGCCAG GCGGCTGCAAATTCCAACCTACCTCCCCCATTTCTCAACTTCACACAGCTTCTTCCAGCATTCCAGGCTCAAGGGTTGGA CCTTAAAGACCTTGTAGCCCTCTCAGGTGGCCACTCCATTGGACTTGCCAAGTGCAGTTCCTTCCAAGCCAGGATCTCCG GTGACACCAACATCAACCCCAAGTTTGCAGCCACTTTGCAAAAGACATGCAATGTTGGTGGGAATAGCAGTTTAGCACCA CTGGACAAGACTCCTACAAAATTTGACACTAGATACTACAAGGACTTGTTGGAGAAAAAGGGTCTTTTCCATTCTGATCA AGAGCTCTTCAAGGGTGATGGTTCTGCAAGTGATAGATTGGTGTATCTTTACAGCAAGAGTTCTCATGCTTTTGCCAAAG ATTTTGGAGTTTCCATGATCAAGATGGGTAACATTAAGCCTCTTACTGGGAAGCAGGGAGAGATCAGGTGCAATTGCAGG AAAGTCAACAACTACTAG
Protein sequence (LotjaGi1g1v0109100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNSHRQSFLVLVLVTLATFLIPSTLAGLTPGYYGKVCPQALPIIKSVVQKAINREQRIGASLLRLHFHDCFVNGCDGSLL LDDTSSFVGEKTALPNLNSVRGFEVVDEIKAAVDRACKRPVVSCADILAIAARDSVAILGGKQYWYQVRLGRRDARSASQ AAANSNLPPPFLNFTQLLPAFQAQGLDLKDLVALSGGHSIGLAKCSSFQARISGDTNINPKFAATLQKTCNVGGNSSLAP LDKTPTKFDTRYYKDLLEKKGLFHSDQELFKGDGSASDRLVYLYSKSSHAFAKDFGVSMIKMGNIKPLTGKQGEIRCNCR KVNNY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | - | – | |
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 8 | 21 | 14 | - | – | |
| PANTHER | 9 | 323 | 315 | 1.5E-167 | – | |
| PANTHER | 9 | 323 | 315 | 1.5E-167 | – | |
| Phobius | 22 | 26 | 5 | - | – | |
| SUPERFAMILY | 27 | 323 | 297 | 1.92E-103 | ||
| ProSiteProfiles | 27 | 323 | 297 | 70.559 | ||
| Phobius | 27 | 325 | 299 | - | – | |
| CDD | 27 | 322 | 296 | 3.55522E-161 | ||
| Gene3D | 32 | 320 | 289 | 1.3E-109 | – | |
| PRINTS | 37 | 56 | 20 | 5.6E-54 | ||
| Pfam | 45 | 273 | 229 | 3.7E-72 | ||
| ProSitePatterns | 59 | 70 | 12 | - | ||
| PRINTS | 59 | 73 | 15 | 7.0E-27 | ||
| PRINTS | 61 | 81 | 21 | 5.6E-54 | ||
| PRINTS | 101 | 114 | 14 | 5.6E-54 | ||
| PRINTS | 121 | 131 | 11 | 5.6E-54 | ||
| PRINTS | 122 | 139 | 18 | 7.0E-27 | ||
| PRINTS | 142 | 154 | 13 | 7.0E-27 | ||
| Gene3D | 168 | 302 | 135 | 1.3E-109 | – | |
| PRINTS | 189 | 201 | 13 | 5.6E-54 | ||
| PRINTS | 190 | 205 | 16 | 7.0E-27 | ||
| ProSitePatterns | 190 | 200 | 11 | - | ||
| PRINTS | 239 | 254 | 16 | 5.6E-54 | ||
| PRINTS | 241 | 256 | 16 | 7.0E-27 | ||
| PRINTS | 255 | 272 | 18 | 5.6E-54 | ||
| PRINTS | 297 | 310 | 14 | 5.6E-54 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Biological process | Response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Hydrogen peroxide catabolic process | The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2). | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0109100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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