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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0112800 |
| Transcript ID | LotjaGi1g1v0112800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GPI mannosyltransferase 2; TAIR: AT1G11880.1 transferases, transferring hexosyl groups; Swiss-Prot: sp|Q5KR61|PIGV_RAT GPI mannosyltransferase 2; TrEMBL-Plants: tr|A0A1J7HBL8|A0A1J7HBL8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0112800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:17639446..17644091) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTCCTCAATTTATTAATTATTGGTTAAACTTTCTTATAGGACTTTTGTGGGGAGAAATTTAAGTCCTTTGTGGGAAA GATTCCTGATTCCATCAGAAGGTAAATAATTATCTTAACTCCTACCACTATTGTGGTTTTCCTGTGATCTAACACTGTTA GAAACTGAACTTAAGCCTTAGGGGGCAATACAGAAACTCACTTCCAAACTGAATTTGAATGATATTGTTGTCGAATTATA AAGTATCACTTCCAAACTCAATGCTAAGAAACATTTTCTTTTGGTGGTAAGACAAGGCTGGCATTTTCTTTGTGAGGCCT CACAATCTTTACATTTTGTAGGGGTTAGATTCAGTAGCTGTTATTATTGCAAAATGGTTCAAACATCAAACCCTCCTCCT CCTCCTCCTCATCATCATCACCAAGCATTGGTCTTAAAATCAGCAATATACTCAAGGCTCACTGTGCTGACCCTAATCAC CATTTGGCGAATTCTACTTTCCCCTTACGACACCTCTGCACCCTTAAACCCTCCTTGCCTCTCCTCCACCACCACCACCC CCAACCACCCTCTTCCTCCCCAATCTCGCATCGAAAACTCCGTTGTCTGGGACTCCGTCTACTTCCTCCGCATTGCTCAG TGCGGCTACGAGTACGAGCAGACCTACGCTTTCTTACCCCTCCTTCCCCTCTCCATTTCCTTCTTCTCTCGCACCGTTTT CGCTCCGCTCATCCCCTTCTTTGGCCAAAGAGCTGTTCTCGCTCTCTCTGCTCATGTAATCAACAATCTCGCTTTCGTCC TCGCCGCGCTTTTCCTTTACAGGTGAGTCTATCCTTCTAAAATGGAAGTTTTGTTCAAGTTAAATAGGTTTCATTGATTT CAGCTCATATTCAACAGGCTTGTTAATAGCGCGCTATATCCTATAGCGTAGCGCCCTAGGGGTTCACCGCTACTCCACTA TTCACCGTTATTTACGATATTTGCCGCTATAGCGCCGCAATAGTGCTCAAAATAGCGTTTTTTGGGCTTGCCGCTCGCTA CACTACGCTATCCGCCATTAACAACCCTGATATTCAATAATACTGTTTTTTATGATGATTGTTGATTGTTGGTTTGGTTA TAACTTATGCAGACTTTCCATAACTATCTTGAAGGATCCTGAAGTAGCATTACGGGCTACGATTTTGTTCTGCTTCAATC CGGCCTCCATTTTTTATTCATCAATGTAATGTTCTCACCCTTGTTTTGTGTTTTATATCTTGGCTTAACTGCACTTTCGG TCTCATAGTTTAGTAGCTTTGCTCCATTTACTATATCTTTTGGCAATTTTGGTCTCATTTCCCTACTTCATTTTTCAAAT TTTTGGTCCCAGTTTAGTGATTTTCTAGTTTTAGTGCCTCTACTTCTTTACATATTGGATGAAGAGCTAGTGACGAGACT ACATTTGCACAGTTAAGAAAATAGAGACACTGCAATAATTGTCGAATGGGATCAAAATTGCGAATGCAACAGTAGGTGGA TCAAAATTGCTGAATCACTAGGCCAGTGTGACCAAAATGCAATTAAGCTTTTTATTTGAAAAAGCTTGGTGATTTTATAG TTTTAGTGCTTCTACTTCTTTTCATATTGGATGGAGAGCTAGCGAAGAGACTACGATTGCACAATTAAGAAAGTAGATGT ACTAAATTGGTGGAATCTATAAACTTGGGAACTAAAATTGCGAAAATAAAAGTAGGTGGATGATCAAAATTGTTGAATCA CTAGACCAGGTGGCCAAAAATGCAGTTAAGCTTTATATTTATACATGTTCCTTCGTGAGTTGGATATTGATCAAATTAAA CTTGGCTCATTTTTCATTTGCAATGGCAGATACTCAGAGAGTTTGTATGCTCTTCTTTCTTTTGGAGGATTGTACTACTT TGTATCTGGTGGAAATAATAAAGCTATACTTCTTCTTGCTCTCTCTGGTTGTGCAAGGTCTAATGGGGTTCTTAATGCGG GATATCTCTGTTTTCAGACCATGCATCGGGCTTATCATGCCATATTTCAGAAAAAGCGTGTTGCTGTAAGAGCCTTACTT CTTTCCACTTTCCTCCATGATGGTATATGTGGTTGTAATGTTTTCCTTTGAGAAATAATTTTGGGAACATAGGTGGGAGT TGTCATTTGCACTCAATCATTTTTTCAAAATGAATGTTTGTTTCTAATAAAATCCGCTGTGTTTCCATGTAATAGGTCAT AGAGTAGAAAGTAAAAGTAACTGGAACTAATAAAACTTCCCTATTAATTTAGGTCTTACCTATGTGCAAAAGAAACATTT GTGGACTGAATCCGGCATAGCTGAAGTAGTTAGGGTAGATGTTCTCAGAATGATTTTCATGCCAACTGGAACTCTTGATC GATTCTTCTGTCATTTCGGCAGTTGGCATTGCAGATTGTTACTGTTGGTGCTTTACGTAGTGCATGCATTTTTGCTCCAT TCATAGCTTTCCAGGCGTATGGCTATTACAATATGTGTGTCGGACATTCTCTTGATGAAATAAGGCCTTGGTGCAAGGCT AGGGTACCGCTACTTTACAATTACATTCAAAGTCGTTATTGGTATGTCCATATTTAAGTTAGTGTTCATTTATTTTGCTC AAGTTATGCTTTTGGCTGAACTATTATACTCTAGCCTGTGCAAACTATCATGTTGTATTCTCTTTGTAGTTAAAGTTTTA ATTTTAATATATATTAAGATATTCCAGTGACGGTTGTTAATTTCTGATTGTCCAGGAATGTGGGTTTCTTGAGACATTTT CAGCTGAAACAGTTGCCTAACTTTCTTCTTGCTTCCCCAATTCTATCTCTTGCACTTTGCTCAATTGTCCATTATGCTAA GTCTAGGCCTCAGAACTTTTTCTCACTGGGTTTCCAAACTACTATTAATGAGAAGAGCTGTGGAGTTGTATTTTTGTCAG ATGATCTCTCAAGGTCCAAAGCAGCTGGAATTGTGGAGAAATCCTCTTTAGAAGGTAGGTAAGATTCTCAAACAGATTAT TGTGTACTTGGAAGTACATTTCCCTGTAAGGAATCGTGATAATCAATTAACTGACATTTAAATCACAATTAAGTCCGCTT TGATAGCTTCTATGTTGGGGTTATTTCTGATTTTTTCACATCTGTGGTTCAGTCATTTGTGTTGTTTGTCTTGTTATTCC TGTTTGGTGATGGGTGTATACTGTATAGTCACAAGCTATGCTTAATTCCTTAATCTATTGGTCTGTATAGCATATAAAAA TGTATAATCTTGTGCGTTTGGACACATAATAGGTTAATATCATTGCAACCATGACACTACTCACTCCTGTAACAGAACAC TTCAATCTTAGGAGGAGAAAGAATGTGATTAAAGGGGATGTTGCTAATATTCCCACAGAATCTGAGCCAGCAGCTGCGCC AGGTTACTTGTCAGCATCTGTTCTCCCATTTGTGTTACACTTGGGATTCATGGCAGCCGCTGCTTTTCTTGTCATGCACG TTCAGGTTAGTCTACTGTTGACTTCTGCTAATGTTTATCACATTAAGAAAACTGAACATGAGAAACTGATCAATGCCAAC TCGAACTTCCGTTAAGCATCATATTTTTGGAGACCTGGTCCTGAATATTGCTTAAGGGTCTGTTTAATTATGGTTTTTAA AAACTGAAAGTTTAAAACCTAATTTCAAAAACTGTTTTTGAAAACAGTTCTCATTTTTAGTTTTTAAAACTAAAATATCA TAACAGCTTAAAGATGTTTTTTGTTTTCAAATTTCAGTTTTTTAATGTTAGAAAACATCTCATTCAATTCGAACAATTTA AAAAAAAAAACAGTTACTAAAAACTGTTCTTAAATACAGAAAACTAAAACTGTAATAAACAGACCCTTATTCTAACTTTT TAACTTAAGGTGCTATTTGTAGGAATGAAATTGGGGTGGTAAAAATGAGGGAATAAAAATTGGCATAGTATTTGGTCTTT CATATCTTTTTGCAGCTTTAGAATGGGTGAATGTTACTTATTACTGATGAGAATTTTCGGCAATCAACATTTAACAGGTG GCCACCCGTTTCTTGTCTTCCAGTCCTCCTCTTTATTGGTTTGCTTCATATATAATGACATACCCTGCAAAATGCTTTAG ATGGGGGTACATGATATGGGCATACTCTGCGGCATATATTTTTCTTGGCAGTTTGCTCTTTTCAAACTTCTATCCTTTTA CATGATGAGGAATAGATAGATAGTTGGACAGATACTAGATAGATAGATGGTGCTACCCGGAAACTGTAGTCTGTAATACC TGTTGAGTGCAAATTTTCATCCCAATTTCTTTGAAGAACTTTGTTTACCTTTTATCTGTGTGTTAATATCTGTTTCCAAG CCAACTACAGATTTTTTTTTTTTACTTTTCCACTATTTTACTTTATGTTAAGTTGGAGTTCATCATCCCACAATTTCAAC GAATTTATTCCACAACTTATTTATGCAAGATGTTGATTCCTAAAGGGGATCGCTGAAGGTTCTACCTGAATAAGCCAGAA TCATTGGAGTTTGTTAGTGCTCTTAAGCTAAGAGATATTTTAATTTTCAATTTTAATGTTATTTTATTATATTGTGGCTG ATTGGG
CDS sequence (LotjaGi1g1v0112800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTCAAACATCAAACCCTCCTCCTCCTCCTCCTCATCATCATCACCAAGCATTGGTCTTAAAATCAGCAATATACTC AAGGCTCACTGTGCTGACCCTAATCACCATTTGGCGAATTCTACTTTCCCCTTACGACACCTCTGCACCCTTAAACCCTC CTTGCCTCTCCTCCACCACCACCACCCCCAACCACCCTCTTCCTCCCCAATCTCGCATCGAAAACTCCGTTGTCTGGGAC TCCGTCTACTTCCTCCGCATTGCTCAGTGCGGCTACGAGTACGAGCAGACCTACGCTTTCTTACCCCTCCTTCCCCTCTC CATTTCCTTCTTCTCTCGCACCGTTTTCGCTCCGCTCATCCCCTTCTTTGGCCAAAGAGCTGTTCTCGCTCTCTCTGCTC ATGTAATCAACAATCTCGCTTTCGTCCTCGCCGCGCTTTTCCTTTACAGACTTTCCATAACTATCTTGAAGGATCCTGAA GTAGCATTACGGGCTACGATTTTGTTCTGCTTCAATCCGGCCTCCATTTTTTATTCATCAATATACTCAGAGAGTTTGTA TGCTCTTCTTTCTTTTGGAGGATTGTACTACTTTGTATCTGGTGGAAATAATAAAGCTATACTTCTTCTTGCTCTCTCTG GTTGTGCAAGGTCTAATGGGGTTCTTAATGCGGGATATCTCTGTTTTCAGACCATGCATCGGGCTTATCATGCCATATTT CAGAAAAAGCGTGTTGCTTTGGCATTGCAGATTGTTACTGTTGGTGCTTTACGTAGTGCATGCATTTTTGCTCCATTCAT AGCTTTCCAGGCGTATGGCTATTACAATATGTGTGTCGGACATTCTCTTGATGAAATAAGGCCTTGGTGCAAGGCTAGGG TACCGCTACTTTACAATTACATTCAAAGTCGTTATTGGAATGTGGGTTTCTTGAGACATTTTCAGCTGAAACAGTTGCCT AACTTTCTTCTTGCTTCCCCAATTCTATCTCTTGCACTTTGCTCAATTGTCCATTATGCTAAGTCTAGGCCTCAGAACTT TTTCTCACTGGGTTTCCAAACTACTATTAATGAGAAGAGCTGTGGAGTTGTATTTTTGTCAGATGATCTCTCAAGGTCCA AAGCAGCTGGAATTGTGGAGAAATCCTCTTTAGAAGAACACTTCAATCTTAGGAGGAGAAAGAATGTGATTAAAGGGGAT GTTGCTAATATTCCCACAGAATCTGAGCCAGCAGCTGCGCCAGGTTACTTGTCAGCATCTGTTCTCCCATTTGTGTTACA CTTGGGATTCATGGCAGCCGCTGCTTTTCTTGTCATGCACGTTCAGGTGGCCACCCGTTTCTTGTCTTCCAGTCCTCCTC TTTATTGGTTTGCTTCATATATAATGACATACCCTGCAAAATGCTTTAGATGGGGGTACATGATATGGGCATACTCTGCG GCATATATTTTTCTTGGCAGTTTGCTCTTTTCAAACTTCTATCCTTTTACATGA
Protein sequence (LotjaGi1g1v0112800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVQTSNPPPPPPHHHHQALVLKSAIYSRLTVLTLITIWRILLSPYDTSAPLNPPCLSSTTTTPNHPLPPQSRIENSVVWD SVYFLRIAQCGYEYEQTYAFLPLLPLSISFFSRTVFAPLIPFFGQRAVLALSAHVINNLAFVLAALFLYRLSITILKDPE VALRATILFCFNPASIFYSSIYSESLYALLSFGGLYYFVSGGNNKAILLLALSGCARSNGVLNAGYLCFQTMHRAYHAIF QKKRVALALQIVTVGALRSACIFAPFIAFQAYGYYNMCVGHSLDEIRPWCKARVPLLYNYIQSRYWNVGFLRHFQLKQLP NFLLASPILSLALCSIVHYAKSRPQNFFSLGFQTTINEKSCGVVFLSDDLSRSKAAGIVEKSSLEEHFNLRRRKNVIKGD VANIPTESEPAAAPGYLSASVLPFVLHLGFMAAAAFLVMHVQVATRFLSSSPPLYWFASYIMTYPAKCFRWGYMIWAYSA AYIFLGSLLFSNFYPFT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 15 | 497 | 483 | 3.1E-172 | – | |
| PANTHER | 15 | 497 | 483 | 3.1E-172 | ||
| Pfam | 20 | 497 | 478 | 3.1E-148 | ||
| Phobius | 20 | 42 | 23 | - | – | |
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 43 | 102 | 60 | - | – | |
| TMHMM | 98 | 117 | 20 | - | – | |
| Phobius | 103 | 123 | 21 | - | – | |
| Phobius | 124 | 128 | 5 | - | – | |
| TMHMM | 127 | 149 | 23 | - | – | |
| Phobius | 129 | 149 | 21 | - | – | |
| Phobius | 150 | 160 | 11 | - | – | |
| Phobius | 161 | 181 | 21 | - | – | |
| TMHMM | 161 | 183 | 23 | - | – | |
| Phobius | 182 | 205 | 24 | - | – | |
| Phobius | 206 | 229 | 24 | - | – | |
| TMHMM | 207 | 229 | 23 | - | – | |
| Phobius | 230 | 244 | 15 | - | – | |
| Phobius | 245 | 267 | 23 | - | – | |
| TMHMM | 245 | 267 | 23 | - | – | |
| Phobius | 268 | 321 | 54 | - | – | |
| TMHMM | 318 | 340 | 23 | - | – | |
| Phobius | 322 | 340 | 19 | - | – | |
| Phobius | 341 | 420 | 80 | - | – | |
| TMHMM | 421 | 443 | 23 | - | – | |
| Phobius | 421 | 441 | 21 | - | – | |
| Phobius | 442 | 446 | 5 | - | – | |
| Phobius | 447 | 466 | 20 | - | – | |
| Phobius | 467 | 472 | 6 | - | – | |
| TMHMM | 472 | 494 | 23 | - | – | |
| Phobius | 473 | 494 | 22 | - | – | |
| Phobius | 495 | 497 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity | Catalysis of the transfer of an alpha-D-mannosyl residue from dolichyl-phosphate D-mannose into membrane lipid-linked oligosaccharide. | ||
| Biological process | GPI anchor biosynthetic process | The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol group is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage. |
Expression pattern of LotjaGi1g1v0112800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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