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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0121200 |
| Transcript ID | LotjaGi1g1v0121200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alkyl transferase; TAIR: AT5G58770.1 Undecaprenyl pyrophosphate synthetase family protein; Swiss-Prot: sp|Q56Y11|DDPS2_ARATH Dehydrodolichyl diphosphate synthase 2; TrEMBL-Plants: tr|I1MBA3|I1MBA3_SOYBN Alkyl transferase; Found in the gene: LotjaGi1g1v0121200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:19101187..19105797) extracted from Lotus japonicus Gifu genome v1.2.
AACCAATTGGCTCCCTTTCCCTGCATATATGGATGCCGAGCACTCAATTCACCACAATTTTGTACAACGTGCCTATTATC ATAAGATGCCGTTTCAAAGCAAGCTTCTATCAAGTTCCACCAATACATTATCACACACGTTTATAAATTAAGCCACACTC TACCTTCACACTGCATTCTGCAAGAGCTAAACCATTCATTTTTGCATTTTGCCAAACAGATAAAATCGTTATCCCAGTTC AGGAATAAGATGCAATCATTAAGGCTTCATTTTCCCGCTCCCAAACAGACAAAATCACTATCCCAGTTCAGGATTAAGAC GCTATCATTGGTGCTTCCACACACTAACTATTCTCATTATAATCCTTATCCCCGTTCCCAAACACACTTATTGCCTTCTT ATCCAGTAACCGTTACTAAACGCAGCAGCACCATGACTGTTATAGCAAACATGGCGGTTCAAGGTGACGCGGACGGCGGG ACCTCCGTCGCCGAGGAGGAGCCGATGCCGCCGGAGCTGCGGTTGGAGCTGATGCCGAAGCATGTGGCGGTGATAATGGA CGGGAACGGGAGGTGGGCGAAGATGAGGGGGCTGCCACCGTGGGAGGGACACGAAGCCGGCGTGCGGTCGCTGAAGAGGC TGGTGAGGCTGTGCCGGAGCTGGGGGGTGAAGGTTCTGACGGTGTTCGCTTTCTCAACTGATAATTGGGTTCGCCCCAAG GTCATTATTGTTGTCCATTTTCTTTTGGTTTTGGCGTCGTCGTTGTTAATTTTGTGGTGGTGGTTGCTTTGCTGCAGGTG GAGGTTGATTTCTTGATGAGGCTGTTTGAGAGAACTATAAATTCTGAAGTTGAAGCATTTATGAGGTAACACTAAACTCC CTTACTGCTCTACTTTTTTAATCAAGCATGTTTAGTTTAGTTACTTCATTTAAACAAGTCATTAGATACTCTTAAACACA GAGACTTCTTTTAATTTATGGGTCATGACTTATGATGCTAGTACCCACTAACACTACTACATCTTTCAAATAACTTATTT TGGTAAACTAGGAGAAATGAAGGGGTTTGCGAGGTGAATGGTTAAAGTTCAAATTTTGGCGAAAAATTAATTTACTAACA ATTACTAACAACTAACATCTGTCTACAAAAAAACCTAGAGTGGATAATGACCATTTATATTTTGGTTCACCGGTGAATCA CTAGTTAAAAACAGTTAAATTTAAGATTCTAGAAATATTCTTTATATCAATGGATAAGATTGAAAGAGTGATAAAATGGT ACAAAGGTAAATAAACTTAATTTGCACCCGGAGCTTATCTCTCAATTTTTTATGTAGATCTAGTCAAATTGGAGAAGGAG GAAAGGAGACAGGATGGCCGCGGCGGTGGTGGACCGCTAGTTGGTTGGAATGGGTGGGAAGGAGGGATAGGGGATGCGAG AATACATTGACTTAAATTGTAAAAAATATCTGAAATTCTGGTTCACGTACATGACAGATGTTGAACCAAATGTCTGAGAC ATCTGGCACAACGTACAGCAGAAGTGCAACACAATATTAAATCAACAAAAATAATAAAGAACACAGAGAATTGTTAACCC AGTTCGGTACAACATCACCTACATCTGGAGAGCTTCAGCCCGAGAAAGATAATCCAGTATTATAGAGAATCAAGTACTTA ATTGAACAGCCCCTGTTCACAGCCTTTCCTACTTATTACTACCAGTGGTTTATTACTTAGGTCTCCCCCAGTATGAGAAC CCCCTCTCACTTTCTCACACAATCACTGCCACAGTGATTGAAACAATAAACAACAAAATGAAGAGATTATAACTCAACTA AACAAACCAACTCTATGCCATATGATTATCAATGGAGACAGTAGAGTGGTGTACAAATAATACAATAAGGACTCACAACC ACAAACCCTAAAAACACCCCCAAACGGTGCCAAACGCACACTTAGCAACTAGGGTATAAATAGTTGTTCTTTAGGTCTTG ATCTTCAATGGGCTTGCACGAAAATAGAGTCCACAAACAGATTTGGAACAAATCTTTTTAAACCAGTAACAAATCTTATC AAATAAGATTTGAACAAAAGATAACAACTTTCACAATTTAAATCAAATCAAATCCTCTTCAGCAGATTTGATTCCACTAT AATATATTCCAGATAGCACACAGAAGCTTCTAAAACAACCCTAACTTGAATACCACGTAATCAAAACACAGCTTCACAGA TAACTTAGTCAACTCATATCAGATCCGCAGGGACACATGTCATAGTCAAGATGTTACAACATCGTGTTCGACATGTTGGC AAAAACACACTTAGCTGAAATTCAGACAATCATGAACAAATGAACAACAATATCTTTGGTGCAGTGATGAATCAAAATAT AAATGGTCCACCCTAGTGTGTACCTTTTATTTTTTCCTTTATCTCTTACTTATTATCACATCACATCATATATCATATCA ATAAATTATTTCTCTTCTCATATTTTCTCTCTTGTCTACACAACATTTTAATTAATTTAGTTACAATTTATAATATGTCA CTTGTTTTTTTACATTTAACATATATATAAGGGTTTTCTTTAAAGAGTAATATAGTATGGACTCTGATAGATAGAAAGAA AAAAAAAAGTAACATGATATGTGATTGATAGAAAAAGAAAGTGAAAAATGAGATGCAACAGAAAGTTAAGTATAAATGAG ATTTAAAATACAAAAATTTGTAGTATTAATATAGATTTAAAATAAAAGTAAGGTAAGCCCCCAAACCGAAAATATCGGGA GATTGTTCTAACTAGGGATGATAATGTTACCCAAACTCGTGGGTACCCGTCCGAACCCGACCCGAATTTACGGGTAAAAC TCGATATAATTGGGTTTGAGTTTGGTATTGGTGATACCCGCACCCGAACAAATCAGTGTTGTTAAGATCTCGATATGGAT CCCAAGATCTTACGATTTTAGGATCCGAGAAAGCCTCAACGATCTAGATCTATTACAAGATCGGAGAATGGATTGGATCT CACCGGGATCCCGATCCGCGAAGCCAGGATCCCTCGTATTCCGATCTTGCAGAGTGGGAGTTTCACACTTGGTCTTTTCT ATTTTTGGCCCATTTCAACGTCCAATTTCAGAATTTAAAAATAAAAGTCCAATTTCAGCCAAAACTCATAAAGAGATAAA TGTTTCTTAATGAATATAAAAAAGTAATAATCCCTAAACCCCTAAACGACAATTCCTAACTTTCTCCAAGTCTCAAACCA TTGAGCCAAAGCCAATACAATGAACAAACACCTTGGATTATGATTCTTATGCTATGAATTTATTATGTCATTGTGTGTGA ATTATGAGTAATTTTTCATATGTATGTGAAATTTTATGTATATATAACTTATGAAGTATATATTTGCATACTTATTAGGA TCTTATTAATATCTACGATCCGATCCCAGTCCTAGGATTTACGATCTTTTACCCCCTAACTGATCCTAAGAAGATCCCGA TCTTGACAACATTGCAGACAATATATATATATGAAATCGCAAAACTACTCTTATATATACCATGCTAACAACTTGATTTG CTAAGAATTTGGTTATATTTAAACAACAAGATACCATATTTTCTGACAAAAAGATATAAAACGGTTTTTTCACAACAAAG TAATATAAGTTATGTTTTTTTTTGCAAAATAAAGTCTATGCATCAAGTTAGGTTAGGACATGAGTTTGAGACTACTATGG GTTTGAGTATGAGAGTTCAGGTTTGAGTTTGGGAAAAATAATAAAAAATATAATGTGTATAAAAATTAGTAAACTCATTT TTGAATGGCTTATGGTGATTGGCCCAATACTAACTATTTTGGGGTCACTTTGTAATATTCCCTTTATTACAGGGCAGGAA TTCGAATATCTGTAATTGGAGATTCATCAAAGCTCCCCAAGTCCCTGAAGAGAATGATAACTAGTGCAGAGGAAAGCACC AAGGACAATTCCGAACTCCAACTTATTGTGGCGGTTAGCTACAGTGGCAAATATGATGTTGTCCAAGCATGTAGAAGTGT GGCCAAAAGAGTCAAAGATGGCCATGTTGATTTGGAAGACATAGATGAAAACATGATTGAACAGGAACTGGAAACAAATT GCACTGAGTTTCCTAATCCTGATCTACTAATAAGGACTAGTGGGGAACTTAGAGTTAGCAACTTCTTGTTGTGGCAATTA GCATACACAGAACTATTCTTTAATCGAGAACTTTGGCCTGATTTTGGGAAAGAGGAGTTTGTAGAGGCCTTAAATTCATT TCAGCAGAGACAAAGACGCTATGGTGGACGCCATTCATAAACTATTTGTCTGCAATATGGTACCTTATAGGTTGGACTTA TAATAAGCTACATAAGTAAAGTAATTATTGTCTGCCATATGGCATATGTTATAGCTAGGCGCCTAAGAAAAATTAGTGTT TTTTACCCGTTCGTTGCACGGTGAATTTGTCTATTATAATTATATATACATTTTGAGATAAACTTCACTCTATGAGCAAT GAAGTTTCTTTTAAAAAAGTGTAATTTTCATTCCTTATTGTCTATAGAGTG
CDS sequence (LotjaGi1g1v0121200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAATCATTAAGGCTTCATTTTCCCGCTCCCAAACAGACAAAATCACTATCCCAGTTCAGGATTAAGACGCTATCATT GGTGCTTCCACACACTAACTATTCTCATTATAATCCTTATCCCCGTTCCCAAACACACTTATTGCCTTCTTATCCAGTAA CCGTTACTAAACGCAGCAGCACCATGACTGTTATAGCAAACATGGCGGTTCAAGGTGACGCGGACGGCGGGACCTCCGTC GCCGAGGAGGAGCCGATGCCGCCGGAGCTGCGGTTGGAGCTGATGCCGAAGCATGTGGCGGTGATAATGGACGGGAACGG GAGGTGGGCGAAGATGAGGGGGCTGCCACCGTGGGAGGGACACGAAGCCGGCGTGCGGTCGCTGAAGAGGCTGGTGAGGC TGTGCCGGAGCTGGGGGGTGAAGGTTCTGACGGTGTTCGCTTTCTCAACTGATAATTGGGTTCGCCCCAAGGTGGAGGTT GATTTCTTGATGAGGCTGTTTGAGAGAACTATAAATTCTGAAGTTGAAGCATTTATGAGGGCAGGAATTCGAATATCTGT AATTGGAGATTCATCAAAGCTCCCCAAGTCCCTGAAGAGAATGATAACTAGTGCAGAGGAAAGCACCAAGGACAATTCCG AACTCCAACTTATTGTGGCGGTTAGCTACAGTGGCAAATATGATGTTGTCCAAGCATGTAGAAGTGTGGCCAAAAGAGTC AAAGATGGCCATGTTGATTTGGAAGACATAGATGAAAACATGATTGAACAGGAACTGGAAACAAATTGCACTGAGTTTCC TAATCCTGATCTACTAATAAGGACTAGTGGGGAACTTAGAGTTAGCAACTTCTTGTTGTGGCAATTAGCATACACAGAAC TATTCTTTAATCGAGAACTTTGGCCTGATTTTGGGAAAGAGGAGTTTGTAGAGGCCTTAAATTCATTTCAGCAGAGACAA AGACGCTATGGTGGACGCCATTCATAA
Protein sequence (LotjaGi1g1v0121200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQSLRLHFPAPKQTKSLSQFRIKTLSLVLPHTNYSHYNPYPRSQTHLLPSYPVTVTKRSSTMTVIANMAVQGDADGGTSV AEEEPMPPELRLELMPKHVAVIMDGNGRWAKMRGLPPWEGHEAGVRSLKRLVRLCRSWGVKVLTVFAFSTDNWVRPKVEV DFLMRLFERTINSEVEAFMRAGIRISVIGDSSKLPKSLKRMITSAEESTKDNSELQLIVAVSYSGKYDVVQACRSVAKRV KDGHVDLEDIDENMIEQELETNCTEFPNPDLLIRTSGELRVSNFLLWQLAYTELFFNRELWPDFGKEEFVEALNSFQQRQ RRYGGRHS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 53 | 319 | 267 | 3.8E-95 | ||
| PANTHER | 67 | 325 | 259 | 6.0E-122 | – | |
| PANTHER | 67 | 325 | 259 | 6.0E-122 | ||
| SUPERFAMILY | 90 | 319 | 230 | 1.18E-83 | ||
| Hamap | 95 | 325 | 231 | 39.165 | ||
| TIGRFAM | 95 | 324 | 230 | 3.9E-87 | ||
| CDD | 98 | 318 | 221 | 1.25611E-128 | ||
| Pfam | 102 | 324 | 223 | 2.6E-79 | ||
| ProSitePatterns | 270 | 287 | 18 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transferase activity, transferring alkyl or aryl (other than methyl) groups | Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi1g1v0121200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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