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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0121200 |
| Transcript ID | LotjaGi1g1v0121200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alkyl transferase; TAIR: AT5G58770.1 Undecaprenyl pyrophosphate synthetase family protein; Swiss-Prot: sp|Q56Y11|DDPS2_ARATH Dehydrodolichyl diphosphate synthase 2; TrEMBL-Plants: tr|I1MBA3|I1MBA3_SOYBN Alkyl transferase; Found in the gene: LotjaGi1g1v0121200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:19101368..19105757) extracted from Lotus japonicus Gifu genome v1.2.
AAGAGCTAAACCATTCATTTTTGCATTTTGCCAAACAGATAAAATCGTTATCCCAGTTCAGGAATAAGATGCAATCATTA AGGCTTCATTTTCCCGCTCCCAAACAGACAAAATCACTATCCCAGTTCAGGATTAAGACGCTATCATTGGTGCTTCCACA CACTAACTATTCTCATTATAATCCTTATCCCCGTTCCCAAACACACTTATTGCCTTCTTATCCAGTAACCGTTACTAAAC GCAGCAGCACCATGACTGTTATAGCAAACATGGCGGTTCAAGGTGACGCGGACGGCGGGACCTCCGTCGCCGAGGAGGAG CCGATGCCGCCGGAGCTGCGGTTGGAGCTGATGCCGAAGCATGTGGCGGTGATAATGGACGGGAACGGGAGGTGGGCGAA GATGAGGGGGCTGCCACCGTGGGAGGGACACGAAGCCGGCGTGCGGTCGCTGAAGAGGCTGGTGAGGCTGTGCCGGAGCT GGGGGGTGAAGGTTCTGACGGTGTTCGCTTTCTCAACTGATAATTGGGTTCGCCCCAAGGTCATTATTGTTGTCCATTTT CTTTTGGTTTTGGCGTCGTCGTTGTTAATTTTGTGGTGGTGGTTGCTTTGCTGCAGGTGGAGGTTGATTTCTTGATGAGG CTGTTTGAGAGAACTATAAATTCTGAAGTTGAAGCATTTATGAGGTAACACTAAACTCCCTTACTGCTCTACTTTTTTAA TCAAGCATGTTTAGTTTAGTTACTTCATTTAAACAAGTCATTAGATACTCTTAAACACAGAGACTTCTTTTAATTTATGG GTCATGACTTATGATGCTAGTACCCACTAACACTACTACATCTTTCAAATAACTTATTTTGGTAAACTAGGAGAAATGAA GGGGTTTGCGAGGTGAATGGTTAAAGTTCAAATTTTGGCGAAAAATTAATTTACTAACAATTACTAACAACTAACATCTG TCTACAAAAAAACCTAGAGTGGATAATGACCATTTATATTTTGGTTCACCGGTGAATCACTAGTTAAAAACAGTTAAATT TAAGATTCTAGAAATATTCTTTATATCAATGGATAAGATTGAAAGAGTGATAAAATGGTACAAAGGTAAATAAACTTAAT TTGCACCCGGAGCTTATCTCTCAATTTTTTATGTAGATCTAGTCAAATTGGAGAAGGAGGAAAGGAGACAGGATGGCCGC GGCGGTGGTGGACCGCTAGTTGGTTGGAATGGGTGGGAAGGAGGGATAGGGGATGCGAGAATACATTGACTTAAATTGTA AAAAATATCTGAAATTCTGGTTCACGTACATGACAGATGTTGAACCAAATGTCTGAGACATCTGGCACAACGTACAGCAG AAGTGCAACACAATATTAAATCAACAAAAATAATAAAGAACACAGAGAATTGTTAACCCAGTTCGGTACAACATCACCTA CATCTGGAGAGCTTCAGCCCGAGAAAGATAATCCAGTATTATAGAGAATCAAGTACTTAATTGAACAGCCCCTGTTCACA GCCTTTCCTACTTATTACTACCAGTGGTTTATTACTTAGGTCTCCCCCAGTATGAGAACCCCCTCTCACTTTCTCACACA ATCACTGCCACAGTGATTGAAACAATAAACAACAAAATGAAGAGATTATAACTCAACTAAACAAACCAACTCTATGCCAT ATGATTATCAATGGAGACAGTAGAGTGGTGTACAAATAATACAATAAGGACTCACAACCACAAACCCTAAAAACACCCCC AAACGGTGCCAAACGCACACTTAGCAACTAGGGTATAAATAGTTGTTCTTTAGGTCTTGATCTTCAATGGGCTTGCACGA AAATAGAGTCCACAAACAGATTTGGAACAAATCTTTTTAAACCAGTAACAAATCTTATCAAATAAGATTTGAACAAAAGA TAACAACTTTCACAATTTAAATCAAATCAAATCCTCTTCAGCAGATTTGATTCCACTATAATATATTCCAGATAGCACAC AGAAGCTTCTAAAACAACCCTAACTTGAATACCACGTAATCAAAACACAGCTTCACAGATAACTTAGTCAACTCATATCA GATCCGCAGGGACACATGTCATAGTCAAGATGTTACAACATCGTGTTCGACATGTTGGCAAAAACACACTTAGCTGAAAT TCAGACAATCATGAACAAATGAACAACAATATCTTTGGTGCAGTGATGAATCAAAATATAAATGGTCCACCCTAGTGTGT ACCTTTTATTTTTTCCTTTATCTCTTACTTATTATCACATCACATCATATATCATATCAATAAATTATTTCTCTTCTCAT ATTTTCTCTCTTGTCTACACAACATTTTAATTAATTTAGTTACAATTTATAATATGTCACTTGTTTTTTTACATTTAACA TATATATAAGGGTTTTCTTTAAAGAGTAATATAGTATGGACTCTGATAGATAGAAAGAAAAAAAAAAGTAACATGATATG TGATTGATAGAAAAAGAAAGTGAAAAATGAGATGCAACAGAAAGTTAAGTATAAATGAGATTTAAAATACAAAAATTTGT AGTATTAATATAGATTTAAAATAAAAGTAAGGTAAGCCCCCAAACCGAAAATATCGGGAGATTGTTCTAACTAGGGATGA TAATGTTACCCAAACTCGTGGGTACCCGTCCGAACCCGACCCGAATTTACGGGTAAAACTCGATATAATTGGGTTTGAGT TTGGTATTGGTGATACCCGCACCCGAACAAATCAGTGTTGTTAAGATCTCGATATGGATCCCAAGATCTTACGATTTTAG GATCCGAGAAAGCCTCAACGATCTAGATCTATTACAAGATCGGAGAATGGATTGGATCTCACCGGGATCCCGATCCGCGA AGCCAGGATCCCTCGTATTCCGATCTTGCAGAGTGGGAGTTTCACACTTGGTCTTTTCTATTTTTGGCCCATTTCAACGT CCAATTTCAGAATTTAAAAATAAAAGTCCAATTTCAGCCAAAACTCATAAAGAGATAAATGTTTCTTAATGAATATAAAA AAGTAATAATCCCTAAACCCCTAAACGACAATTCCTAACTTTCTCCAAGTCTCAAACCATTGAGCCAAAGCCAATACAAT GAACAAACACCTTGGATTATGATTCTTATGCTATGAATTTATTATGTCATTGTGTGTGAATTATGAGTAATTTTTCATAT GTATGTGAAATTTTATGTATATATAACTTATGAAGTATATATTTGCATACTTATTAGGATCTTATTAATATCTACGATCC GATCCCAGTCCTAGGATTTACGATCTTTTACCCCCTAACTGATCCTAAGAAGATCCCGATCTTGACAACATTGCAGACAA TATATATATATGAAATCGCAAAACTACTCTTATATATACCATGCTAACAACTTGATTTGCTAAGAATTTGGTTATATTTA AACAACAAGATACCATATTTTCTGACAAAAAGATATAAAACGGTTTTTTCACAACAAAGTAATATAAGTTATGTTTTTTT TTGCAAAATAAAGTCTATGCATCAAGTTAGGTTAGGACATGAGTTTGAGACTACTATGGGTTTGAGTATGAGAGTTCAGG TTTGAGTTTGGGAAAAATAATAAAAAATATAATGTGTATAAAAATTAGTAAACTCATTTTTGAATGGCTTATGGTGATTG GCCCAATACTAACTATTTTGGGGTCACTTTGTAATATTCCCTTTATTACAGGGCAGGAATTCGAATATCTGTAATTGGAG ATTCATCAAAGCTCCCCAAGTCCCTGAAGAGAATGATAACTAGTGCAGAGGAAAGCACCAAGGACAATTCCGAACTCCAA CTTATTGTGGCGGTTAGCTACAGTGGCAAATATGATGTTGTCCAAGCATGTAGAAGTGTGGCCAAAAGAGTCAAAGATGG CCATGTTGATTTGGAAGACATAGATGAAAACATGATTGAACAGGAACTGGAAACAAATTGCACTGAGTTTCCTAATCCTG ATCTACTAATAAGGACTAGTGGGGAACTTAGAGTTAGCAACTTCTTGTTGTGGCAATTAGCATACACAGAACTATTCTTT AATCGAGAACTTTGGCCTGATTTTGGGAAAGAGGAGTTTGTAGAGGCCTTAAATTCATTTCAGCAGAGACAAAGACGCTA TGGTGGACGCCATTCATAAACTATTTGTCTGCAATATGGTACCTTATAGGTTGGACTTATAATAAGCTACATAAGTAAAG TAATTATTGTCTGCCATATGGCATATGTTATAGCTAGGCGCCTAAGAAAAATTAGTGTTTTTTACCCGTTCGTTGCACGG TGAATTTGTCTATTATAATTATATATACATTTTGAGATAAACTTCACTCTATGAGCAATGAAGTTTCTTT
CDS sequence (LotjaGi1g1v0121200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGCTGTTTGAGAGAACTATAAATTCTGAAGTTGAAGCATTTATGAGGGCAGGAATTCGAATATCTGTAATTGGAGA TTCATCAAAGCTCCCCAAGTCCCTGAAGAGAATGATAACTAGTGCAGAGGAAAGCACCAAGGACAATTCCGAACTCCAAC TTATTGTGGCGGTTAGCTACAGTGGCAAATATGATGTTGTCCAAGCATGTAGAAGTGTGGCCAAAAGAGTCAAAGATGGC CATGTTGATTTGGAAGACATAGATGAAAACATGATTGAACAGGAACTGGAAACAAATTGCACTGAGTTTCCTAATCCTGA TCTACTAATAAGGACTAGTGGGGAACTTAGAGTTAGCAACTTCTTGTTGTGGCAATTAGCATACACAGAACTATTCTTTA ATCGAGAACTTTGGCCTGATTTTGGGAAAGAGGAGTTTGTAGAGGCCTTAAATTCATTTCAGCAGAGACAAAGACGCTAT GGTGGACGCCATTCATAA
Protein sequence (LotjaGi1g1v0121200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRLFERTINSEVEAFMRAGIRISVIGDSSKLPKSLKRMITSAEESTKDNSELQLIVAVSYSGKYDVVQACRSVAKRVKDG HVDLEDIDENMIEQELETNCTEFPNPDLLIRTSGELRVSNFLLWQLAYTELFFNRELWPDFGKEEFVEALNSFQQRQRRY GGRHS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 162 | 162 | 2.5E-75 | – | |
| PANTHER | 1 | 162 | 162 | 2.5E-75 | ||
| Pfam | 1 | 161 | 161 | 3.7E-48 | ||
| TIGRFAM | 1 | 161 | 161 | 1.3E-50 | ||
| CDD | 1 | 155 | 155 | 2.37791E-75 | ||
| Gene3D | 1 | 165 | 165 | 2.5E-56 | ||
| SUPERFAMILY | 1 | 156 | 156 | 6.28E-49 | ||
| ProSitePatterns | 107 | 124 | 18 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transferase activity, transferring alkyl or aryl (other than methyl) groups | Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi1g1v0121200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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