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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0126300 |
| Transcript ID | LotjaGi1g1v0126300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heavy metal-associated protein; TAIR: AT5G24580.1 Heavy metal transport/detoxification superfamily protein; Swiss-Prot: sp|Q9FLU5|HIP9_ARATH Heavy metal-associated isoprenylated plant protein 9; TrEMBL-Plants: tr|A0A0L9UZC9|A0A0L9UZC9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0126300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:20066875..20070230) extracted from Lotus japonicus Gifu genome v1.2.
TTTTGTATAGTCAATGTAGGCAATTTTACCTTATATTTTTACAAGCGATTCATTTTACGGCTCAAACCTATGATCGTAAA GTCATATAATAATAATTTCATCGTTGCGATAAAACTCACATTCTCAATAAAAAGAAGTAGGAAATAAAATAAGATGTCTG TGAAGTGTCAACAATAATTCAGTGTCTAAATATTGTTATTAAGAGTGAAATATGTGATGAGATTCACACTAGGTGCTGAA ACTACAGATCCACACCTAGGTAGATCTCCAGGTTGTCCTGGTGAGGTCCTACACTGACACATATGCCATGCATGTCTGAC AGAATGACACTTCACCACCTAGTCAAGTAGTGAGTGATGAACAATCTCTCAGTCGGTGGTTAATGGAAGTATTCTAATTT TTTAAACATTTCTTTCTCTCTCTTACCCACTTGGCCTCACCATTAATCCCCCCTGGTCTATAAAGCTGCTTATCTTGCTC CACTGCCTCACCCTCTCCTTCTCCTTAACCTTCAGCCTTGAAGATTGAAAAGATTTCTGAAAAGAAATATTAAACTAAGA GAGGTTCTTTTTGCTCTTAGTGGCACTGCATGTGACCATAAGGAATCATTCAGTTTAACTTTATAAGCTAATTAATCAAC CACCCTCCTTCCTTATAATATCAAACTCACTTCTCTTCACTTCTTGTGTTTTCCAAAAATCAGAATTGTAATTTGATATA TTCAGTCCACATTCTTAGAGCAAATGGGTGAGGAAGCAAAACAGGTAAATAACATAACCCTTCTGTTGGCATTTTTCTTT CTAAGTGATGTTTTAACTCATCACCTGATTTGCATTTGTTTGATCTTTGTTTCTGTGCAGGAACAACCTCAGGCTGAAGC CAAGCCAGAGGAAAAGACAGAGGAAAAAGCAGAGGAAAAAGCAGAGGAAAAGCCTGCAGCTGAGGAAAAGAAGGAGGAGG AAAAGCCAGAAGAGGAGAAGAAGGAAGAAGAGCCTAAACCACCAGCTCCATGTGTTCTTTATGTGGACTTGCATTGTGTG GGATGTGCAAAGAAAATTGAGAGATATATGATGAAAATGAGAGGTTCAAATCTTTTCCACTTTTTTACTTTTTGTCACCA AAATGTCATGCATGTTAATTTGTGCACTCAATTTATAATTTATCTTGTAACAGGAGTTGAGGGACTGGTAATTGACATGG CTAAGAATGAAGTGACCATAAAGGGTATAGTGGAGCCTCAAGCAATCTGTGACATGATTACTAAGAAAACAAAGAGAAGA GCAAAAGTTATATCTCCATTGCCTGCAGCAGAAGGAGAACCTATACCAGAAGTTGTCAATTCTCAGGTATCACCATATTT TTCCCTCTTCAATTTATGTTTGAGACCAAACAATAAAAAAATTATGAAACTTAATGGATAATTTTTGGTGTTCCAGGTTA GTGGACCAGTTACAGTGGAACTTAATGTGAACATGCACTGTGAGGCCTGTGCTGAGCAACTCAAGAGAAAGATACTCCAA ATGAGAGGTACCAATTTTCTCTTGATTTCATTGAACATGGTAGCTACATTGTTGGAAAAGTGGAAGAAAAATAGACAGCT CCTTTCATGATCATTAAACTTTGTGGAATTGTGGTGCCAAATGAAGCTTTGTGATAGTGACAAATCAACTTTGTAAACCA TTTAAGAAAAAAAATTGCTAAAGGGACCCCATAAAGGATGAGTCAGCACTCAGGAATTTAGGCATGTCCATCCTTTCATG CATTGCATCCATCAGATTGCTGAGTAAGCACATGATGCTGGACCCCCTAAGGTGGCATTTTTGTGTGCAAATTGGTAGGT CATTATGTATGTCACTATGGCCCCATGGATGGGCCATGTGTGCTGCAGGAGATTGCATCTTAAAAAGAGAGATAAATTGT TTGGGGGTGGAGAGAAGAGGTTTCCTTAAAGTTATTAGTGTGATGGCCAAATTTTGTCAACTAAAAGTGATGAATCAACT TTAAACCCATGCATGAACACAATTAATAAAGTAACATACATTTAAAAACCATTCATGCCATTCACCTAACAGATTTTGCT TTCATCACTTTCAACTAATTTAGTGTGTGTTTGGTACCTCGTTGAGTAATGTCAGAATCAATTTTCACTGTGTAAAATCA CTTTGTGTTACAACATAGATGTTTGGGACCCAATTTGATGCAAAAATTTTCTAGGTCCTGGATTTGATTCCCTTTGTAAT TTCAGGGGCCTTTGGACCCTTTAAGCCTTTTTTTTTTTTTATCTAAAATCAATTTTGAAGCGCTTATCCAAACATCCATT TACTTACTCTTACTCTTGTATACATCATGTATACATCATGCCTTGAAAATTAAATCTCCTTTGACTAGGACTTGAACATA CAGGACAAAACAGTGCAGTAGCATTTAATCAATGCCACATTTAATGCTCAACCTGTTTTCATTAATGTAGGAGTTCAAAC AGCAGTGACAGAGTTCACCACAGGCAAGGTTTTGGTGACAGGGACCATGGATGCAAACAAGCTAGTGGAATATGTCTACA GACGAACCAAGAAGCAAGCCAAGATAGTTCCCCAACCAGAACCTGAACCAGAGAAGAAAGAAGAAGGTAAAGAAGAAGAG AAACCTGCAGCAGAGGAGGGTAAACCTGAAGAGAAGAAAGAAGAGGAGAAAGCAGCAGAGGAAGCCAAGAAAGAAGAGGG TGGTGAAGAAAAGAATGATAACAAAGAAGAAAAGGGTGGTGAAGAAGGGAAAGAAGAAGGAAAGAAAGAAGAGAACAATA ACGGGGCAGTGGTTAACATGGAAGAGGAATTAAGCATGAAGAGGATGATGTACTATTACCAGTACCCTCCACTCTATGTG ATTGAACGCATGCCTCCACCTCAGCTTTTCAGTGATGAAAATCCAAATGCATGCTGCATTTCATGAAATTCATCATCATT GCAATGAGAAAAAAAGGCTTCAGAGTTCAAACTTCAAAGTATAGTTCTGTAAGTACTGTACCACCAGTATGGGAATTTTT TGGAGTTGGGTTGGTGGAATTGAAGGATATTTTAAAGTGGAATCATCACATGATAATAATAAGTTGATTTGATAATATAT CGTTCTGTCTTTTTTATTGTATGTACGATATATTATTATTATACTAGTTACAGATCAATGTTGTACAAATGCTAATGAAA TATGAGTATCTTCCTCAAGTTCTCTAGTATTCCTTTGGTTTTGTTTTCTGTTTGGTTAGTTAGTTAATTCGATGTTAATC AATTTTATGTGATGATGATTTTGCACATGATTATGAAAATGATATTGGATGACATGGGATATAGAAGACAAAACCC
CDS sequence (LotjaGi1g1v0126300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGAGGAAGCAAAACAGGAACAACCTCAGGCTGAAGCCAAGCCAGAGGAAAAGACAGAGGAAAAAGCAGAGGAAAA AGCAGAGGAAAAGCCTGCAGCTGAGGAAAAGAAGGAGGAGGAAAAGCCAGAAGAGGAGAAGAAGGAAGAAGAGCCTAAAC CACCAGCTCCATGTGTTCTTTATGTGGACTTGCATTGTGTGGGATGTGCAAAGAAAATTGAGAGATATATGATGAAAATG AGAGGAGTTGAGGGACTGGTAATTGACATGGCTAAGAATGAAGTGACCATAAAGGGTATAGTGGAGCCTCAAGCAATCTG TGACATGATTACTAAGAAAACAAAGAGAAGAGCAAAAGTTATATCTCCATTGCCTGCAGCAGAAGGAGAACCTATACCAG AAGTTGTCAATTCTCAGGTTAGTGGACCAGTTACAGTGGAACTTAATGTGAACATGCACTGTGAGGCCTGTGCTGAGCAA CTCAAGAGAAAGATACTCCAAATGAGAGGAGTTCAAACAGCAGTGACAGAGTTCACCACAGGCAAGGTTTTGGTGACAGG GACCATGGATGCAAACAAGCTAGTGGAATATGTCTACAGACGAACCAAGAAGCAAGCCAAGATAGTTCCCCAACCAGAAC CTGAACCAGAGAAGAAAGAAGAAGGTAAAGAAGAAGAGAAACCTGCAGCAGAGGAGGGTAAACCTGAAGAGAAGAAAGAA GAGGAGAAAGCAGCAGAGGAAGCCAAGAAAGAAGAGGGTGGTGAAGAAAAGAATGATAACAAAGAAGAAAAGGGTGGTGA AGAAGGGAAAGAAGAAGGAAAGAAAGAAGAGAACAATAACGGGGCAGTGGTTAACATGGAAGAGGAATTAAGCATGAAGA GGATGATGTACTATTACCAGTACCCTCCACTCTATGTGATTGAACGCATGCCTCCACCTCAGCTTTTCAGTGATGAAAAT CCAAATGCATGCTGCATTTCATGA
Protein sequence (LotjaGi1g1v0126300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGEEAKQEQPQAEAKPEEKTEEKAEEKAEEKPAAEEKKEEEKPEEEKKEEEPKPPAPCVLYVDLHCVGCAKKIERYMMKM RGVEGLVIDMAKNEVTIKGIVEPQAICDMITKKTKRRAKVISPLPAAEGEPIPEVVNSQVSGPVTVELNVNMHCEACAEQ LKRKILQMRGVQTAVTEFTTGKVLVTGTMDANKLVEYVYRRTKKQAKIVPQPEPEPEKKEEGKEEEKPAAEEGKPEEKKE EEKAAEEAKKEEGGEEKNDNKEEKGGEEGKEEGKKEENNNGAVVNMEEELSMKRMMYYYQYPPLYVIERMPPPQLFSDEN PNACCIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 327 | 327 | 1.5E-137 | – | |
| MobiDBLite | 1 | 54 | 54 | - | – | |
| Coils | 17 | 37 | 21 | - | – | |
| Gene3D | 57 | 119 | 63 | 1.1E-14 | – | |
| CDD | 59 | 119 | 61 | 1.73417E-7 | ||
| SUPERFAMILY | 59 | 113 | 55 | 9.69E-11 | ||
| Pfam | 60 | 105 | 46 | 3.8E-8 | ||
| ProSiteProfiles | 64 | 112 | 49 | 9.774 | ||
| SUPERFAMILY | 140 | 204 | 65 | 7.07E-11 | ||
| Gene3D | 141 | 208 | 68 | 1.3E-12 | – | |
| CDD | 147 | 207 | 61 | 1.6214E-5 | ||
| Pfam | 149 | 196 | 48 | 1.0E-9 | ||
| ProSiteProfiles | 151 | 198 | 48 | 9.002 | ||
| MobiDBLite | 205 | 282 | 78 | - | – | |
| Coils | 238 | 258 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi1g1v0126300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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