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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • cd00371
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 137 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 0.059s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0039469.2
n.a. Heavy metal transport/detoxification superfamily protein isoform 1 [Theobroma cacao] gi|508777591|gb|EOY24847.1| chr0 12828996 12829956 +
2 domain predictions
2 GO terms
Lj0g3v0065739.2
n.a. copper-binding family protein [Arabidopsis lyrata subsp]. lyrata] gi|297822593|ref|XP_002879179.1| chr0 22916132 22918071 +
2 domain predictions
2 GO terms
Lj0g3v0080529.1
n.a. Cu/Zn-superoxide dismutase copper chaperone [Glycine max] gi|351722110|ref|NP_001235441.1| chr0 31227500 31233353 +
2 domain predictions
2 GO terms
Lj0g3v0103719.1
n.a. n.a. chr0 44234775 44235343 +
2 domain predictions
2 GO terms
Lj0g3v0104309.1
n.a. PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cicer arietinum] gi|502174981|ref|XP_004515645.1| chr0 44616941 44618868 -
2 domain predictions
2 GO terms
Lj0g3v0105219.1
n.a. Uncharacterized protein TCM_014746 [Theobroma cacao] gi|508775371|gb|EOY22627.1| chr0 45097900 45100216 +
2 domain predictions
2 GO terms
Lj0g3v0126429.1
n.a. PREDICTED: copper-transporting ATPase RAN1-like isoform X1 [Cicer arietinum] gi|502141829|ref|XP_004504659.1| chr0 56882838 56888752 +
2 domain predictions
2 GO terms
Lj0g3v0200299.1
n.a. copper-binding family protein [Arabidopsis lyrata subsp]. lyrata] gi|297822593|ref|XP_002879179.1| chr0 98796334 98797838 +
2 domain predictions
2 GO terms
Lj0g3v0201629.1
n.a. PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cicer arietinum] gi|502166304|ref|XP_004513852.1| chr0 99730580 99731941 +
2 domain predictions
2 GO terms
Lj0g3v0247439.1
n.a. Heavy metal transport/detoxification superfamily protein isoform 1 [Theobroma cacao] gi|508777591|gb|EOY24847.1| chr0 128242419 128243628 +
2 domain predictions
2 GO terms
Lj0g3v0251469.1
n.a. PREDICTED: microtubule-associated protein 1B-like [Cicer arietinum] gi|502111232|ref|XP_004493993.1| chr0 130428608 130432472 +
2 domain predictions
2 GO terms
Lj0g3v0270019.1
n.a. PREDICTED: DNA ligase 1-like [Cicer arietinum] gi|502155808|ref|XP_004510199.1| chr0 139908000 139912244 +
2 domain predictions
2 GO terms
Lj0g3v0290599.1
n.a. PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cicer arietinum] gi|502123961|ref|XP_004498327.1| chr0 150885728 150887930 +
2 domain predictions
2 GO terms
Lj0g3v0323589.1
n.a. Heavy metal transport/detoxification superfamily protein isoform 1 [Theobroma cacao] gi|508777591|gb|EOY24847.1| chr0 168987935 168989330 -
2 domain predictions
2 GO terms
Lj0g3v0338379.1
n.a. PREDICTED: myb-like protein X-like [Cicer arietinum] gi|502095842|ref|XP_004490551.1| chr0 177180211 177182923 +
2 domain predictions
2 GO terms
Lj1g3v1091080.2
n.a. PREDICTED: myb-like protein X-like [Cicer arietinum] gi|502095842|ref|XP_004490551.1| chr1 13635672 13642961 -
2 domain predictions
2 GO terms
Lj1g3v1788240.2
n.a. copper P1B-ATPase [Glycine max] gi|110630091|gb|ABD64063.1| chr1 21409305 21418458 +
2 domain predictions
2 GO terms
Lj1g3v3244490.1
n.a. PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cicer arietinum] gi|502106573|ref|XP_004492985.1| chr1 36671922 36674213 -
2 domain predictions
2 GO terms
Lj1g3v3384600.1
n.a. PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cicer arietinum] gi|502130658|ref|XP_004500726.1| chr1 38912137 38913080 -
2 domain predictions
2 GO terms
Lj1g3v4578420.1
n.a. Metal ion binding protein [Medicago truncatula] gi|357510533|ref|XP_003625555.1| chr1 54131269 54133760 -
2 domain predictions
2 GO terms
Lj1g3v4591190.1
n.a. PREDICTED: microtubule-associated protein 1B-like [Cicer arietinum] gi|502111232|ref|XP_004493993.1| chr1 54967575 54969207 -
2 domain predictions
2 GO terms
Lj1g3v4901120.1
n.a. PREDICTED: cyclin-dependent kinase 12-like [Cicer arietinum] gi|502112524|ref|XP_004494359.1| chr1 59430979 59432870 -
2 domain predictions
2 GO terms
Lj1g3v4919900.3
n.a. Copper chaperone (CCH)-related protein-like protein [Medicago truncatula] gi|357511925|ref|XP_003626251.1| chr1 59761084 59762809 -
2 domain predictions
2 GO terms
Lj1g3v4941820.1
n.a. Heavy metal-associated domain containing protein expressed [Medicago truncatula] gi|357441611|ref|XP_003591083.1| chr1 60088627 60090893 -
2 domain predictions
2 GO terms
Lj2g3v0766530.1
n.a. Heavy metal transport/detoxification superfamily protein [Theobroma cacao] gi|508783607|gb|EOY30863.1| chr2 11960508 11965090 -
2 domain predictions
2 GO terms
Lj2g3v0917330.1
n.a. Heavy metal transport/detoxification superfamily protein [Theobroma cacao] gi|508712126|gb|EOY04023.1| chr2 14552202 14553006 +
2 domain predictions
2 GO terms
Lj2g3v2017610.1
n.a. Heavy metal atpase 5 [Theobroma cacao] gi|508777445|gb|EOY24701.1| chr2 30921746 30925742 +
2 domain predictions
2 GO terms
Lj2g3v2017620.1
n.a. Heavy metal P-type ATPase [Medicago truncatula] gi|357518503|ref|XP_003629540.1| chr2 30927788 30932465 +
2 domain predictions
2 GO terms
Lj2g3v2207710.1
n.a. Heavy metal transport/detoxification superfamily protein [Theobroma cacao] gi|508776473|gb|EOY23729.1| chr2 32877723 32879762 +
2 domain predictions
2 GO terms
Lj3g3v0718340.1
n.a. Heavy metal ATPase [Medicago truncatula] gi|357513319|ref|XP_003626948.1| chr3 7812257 7818994 +
2 domain predictions
2 GO terms
Lj3g3v1113000.1
n.a. PREDICTED: transcription initiation factor TFIID subunit 3-like isoform X2 [Cicer arietinum] gi|502082120|ref|XP_004487069.1| chr3 14856115 14857261 -
2 domain predictions
2 GO terms
Lj3g3v2849060.1
n.a. PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cicer arietinum] gi|502082413|ref|XP_004487159.1| chr3 35187865 35191203 -
2 domain predictions
2 GO terms
Lj3g3v3243150.1
n.a. Heavy metal ATPase [Medicago truncatula] gi|357513319|ref|XP_003626948.1| chr3 40031690 40032198 +
2 domain predictions
2 GO terms
Lj3g3v3440310.1
n.a. Farnesylated protein (ATFP6) [Medicago truncatula] gi|357473779|ref|XP_003607174.1| chr3 42167601 42168880 +
2 domain predictions
2 GO terms
Lj4g3v0336930.1
n.a. Chloroplast-targeted copper chaperone protein [Theobroma cacao] gi|508706955|gb|EOX98851.1| chr4 4239507 4240313 +
2 domain predictions
2 GO terms
Lj4g3v0338210.1
n.a. Chloroplast-targeted copper chaperone protein [Theobroma cacao] gi|508706955|gb|EOX98851.1| chr4 4302248 4303973 +
2 domain predictions
2 GO terms
Lj4g3v0341080.1
n.a. PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Cicer arietinum] gi|502142103|ref|XP_004504792.1| chr4 4529082 4549833 -
2 domain predictions
2 GO terms
Lj4g3v0341080.2
n.a. PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Cicer arietinum] gi|502142103|ref|XP_004504792.1| chr4 4547011 4549833 -
2 domain predictions
2 GO terms
Lj4g3v1235940.1
n.a. Metal-transporting P-type ATPase [Medicago truncatula] gi|357512507|ref|XP_003626542.1| chr4 18387666 18389527 +
2 domain predictions
2 GO terms
Lj4g3v1286210.1
n.a. Os01g0927300 [Oryza sativa Japonica Group] gi|297598229|ref|NP_001045267.2| chr4 18882448 18883834 -
2 domain predictions
2 GO terms
Lj4g3v1286210.3
n.a. Os01g0927300 [Oryza sativa Japonica Group] gi|297598229|ref|NP_001045267.2| chr4 18882448 18883834 -
2 domain predictions
2 GO terms
Lj4g3v2374880.1
n.a. PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cicer arietinum] gi|502151188|ref|XP_004508321.1| chr4 32765784 32767192 +
2 domain predictions
2 GO terms
Lj4g3v2400650.1
n.a. heavy-metal-associated domain-containing protein [Arabidopsis thaliana] gi|334185123|ref|NP_001189822.1| chr4 33120597 33122937 +
2 domain predictions
2 GO terms
Lj4g3v2604510.1
n.a. PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cicer arietinum] gi|502140697|ref|XP_004504303.1| chr4 35231751 35233710 +
2 domain predictions
2 GO terms
Lj4g3v2604520.1
n.a. PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cicer arietinum] gi|502140697|ref|XP_004504303.1| chr4 35233202 35233710 +
2 domain predictions
2 GO terms
Lj4g3v2805820.1
n.a. PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cicer arietinum] gi|502135772|ref|XP_004502447.1| chr4 37543522 37544308 +
2 domain predictions
2 GO terms
Lj4g3v2905430.1
n.a. PREDICTED: translation initiation factor IF-2-like [Cicer arietinum] gi|502139359|ref|XP_004503738.1| chr4 38753413 38755119 -
2 domain predictions
2 GO terms
Lj4g3v3093960.1
n.a. Heavy metal transport/detoxification superfamily protein [Theobroma cacao] gi|508783607|gb|EOY30863.1| chr4 41035082 41037097 +
2 domain predictions
2 GO terms
Lj5g3v0615040.1
n.a. Metal ion binding protein [Medicago truncatula] gi|357510533|ref|XP_003625555.1| chr5 7518369 7520499 -
2 domain predictions
2 GO terms
Lj5g3v0615040.2
n.a. Metal ion binding protein [Medicago truncatula] gi|357510533|ref|XP_003625555.1| chr5 7518369 7520499 -
2 domain predictions
2 GO terms