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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0126300 |
| Transcript ID | LotjaGi1g1v0126300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heavy metal-associated protein; TAIR: AT5G24580.1 Heavy metal transport/detoxification superfamily protein; Swiss-Prot: sp|Q9FLU5|HIP9_ARATH Heavy metal-associated isoprenylated plant protein 9; TrEMBL-Plants: tr|A0A0L9UZC9|A0A0L9UZC9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0126300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:20067744..20069820) extracted from Lotus japonicus Gifu genome v1.2.
CAGGCTGAAGCCAAGCCAGAGGAAAAGACAGAGGAAAAAGCAGAGGAAAAAGCAGAGGAAAAGCCTGCAGCTGAGGAAAA GAAGGAGGAGGAAAAGCCAGAAGAGGAGAAGAAGGAAGAAGAGCCTAAACCACCAGCTCCATGTGTTCTTTATGTGGACT TGCATTGTGTGGGATGTGCAAAGAAAATTGAGAGATATATGATGAAAATGAGAGGTTCAAATCTTTTCCACTTTTTTACT TTTTGTCACCAAAATGTCATGCATGTTAATTTGTGCACTCAATTTATAATTTATCTTGTAACAGGAGTTGAGGGACTGGT AATTGACATGGCTAAGAATGAAGTGACCATAAAGGGTATAGTGGAGCCTCAAGCAATCTGTGACATGATTACTAAGAAAA CAAAGAGAAGAGCAAAAGTTATATCTCCATTGCCTGCAGCAGAAGGAGAACCTATACCAGAAGTTGTCAATTCTCAGGTA TCACCATATTTTTCCCTCTTCAATTTATGTTTGAGACCAAACAATAAAAAAATTATGAAACTTAATGGATAATTTTTGGT GTTCCAGGTTAGTGGACCAGTTACAGTGGAACTTAATGTGAACATGCACTGTGAGGCCTGTGCTGAGCAACTCAAGAGAA AGATACTCCAAATGAGAGGTACCAATTTTCTCTTGATTTCATTGAACATGGTAGCTACATTGTTGGAAAAGTGGAAGAAA AATAGACAGCTCCTTTCATGATCATTAAACTTTGTGGAATTGTGGTGCCAAATGAAGCTTTGTGATAGTGACAAATCAAC TTTGTAAACCATTTAAGAAAAAAAATTGCTAAAGGGACCCCATAAAGGATGAGTCAGCACTCAGGAATTTAGGCATGTCC ATCCTTTCATGCATTGCATCCATCAGATTGCTGAGTAAGCACATGATGCTGGACCCCCTAAGGTGGCATTTTTGTGTGCA AATTGGTAGGTCATTATGTATGTCACTATGGCCCCATGGATGGGCCATGTGTGCTGCAGGAGATTGCATCTTAAAAAGAG AGATAAATTGTTTGGGGGTGGAGAGAAGAGGTTTCCTTAAAGTTATTAGTGTGATGGCCAAATTTTGTCAACTAAAAGTG ATGAATCAACTTTAAACCCATGCATGAACACAATTAATAAAGTAACATACATTTAAAAACCATTCATGCCATTCACCTAA CAGATTTTGCTTTCATCACTTTCAACTAATTTAGTGTGTGTTTGGTACCTCGTTGAGTAATGTCAGAATCAATTTTCACT GTGTAAAATCACTTTGTGTTACAACATAGATGTTTGGGACCCAATTTGATGCAAAAATTTTCTAGGTCCTGGATTTGATT CCCTTTGTAATTTCAGGGGCCTTTGGACCCTTTAAGCCTTTTTTTTTTTTTATCTAAAATCAATTTTGAAGCGCTTATCC AAACATCCATTTACTTACTCTTACTCTTGTATACATCATGTATACATCATGCCTTGAAAATTAAATCTCCTTTGACTAGG ACTTGAACATACAGGACAAAACAGTGCAGTAGCATTTAATCAATGCCACATTTAATGCTCAACCTGTTTTCATTAATGTA GGAGTTCAAACAGCAGTGACAGAGTTCACCACAGGCAAGGTTTTGGTGACAGGGACCATGGATGCAAACAAGCTAGTGGA ATATGTCTACAGACGAACCAAGAAGCAAGCCAAGATAGTTCCCCAACCAGAACCTGAACCAGAGAAGAAAGAAGAAGGTA AAGAAGAAGAGAAACCTGCAGCAGAGGAGGGTAAACCTGAAGAGAAGAAAGAAGAGGAGAAAGCAGCAGAGGAAGCCAAG AAAGAAGAGGGTGGTGAAGAAAAGAATGATAACAAAGAAGAAAAGGGTGGTGAAGAAGGGAAAGAAGAAGGAAAGAAAGA AGAGAACAATAACGGGGCAGTGGTTAACATGGAAGAGGAATTAAGCATGAAGAGGATGATGTACTATTACCAGTACCCTC CACTCTATGTGATTGAACGCATGCCTCCACCTCAGCTTTTCAGTGATGAAAATCCAAATGCATGCTGCATTTCATGA
CDS sequence (LotjaGi1g1v0126300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAAAATGAGAGGAGTTGAGGGACTGGTAATTGACATGGCTAAGAATGAAGTGACCATAAAGGGTATAGTGGAGCC TCAAGCAATCTGTGACATGATTACTAAGAAAACAAAGAGAAGAGCAAAAGTTATATCTCCATTGCCTGCAGCAGAAGGAG AACCTATACCAGAAGTTGTCAATTCTCAGGTTAGTGGACCAGTTACAGTGGAACTTAATGTGAACATGCACTGTGAGGCC TGTGCTGAGCAACTCAAGAGAAAGATACTCCAAATGAGAGGAGTTCAAACAGCAGTGACAGAGTTCACCACAGGCAAGGT TTTGGTGACAGGGACCATGGATGCAAACAAGCTAGTGGAATATGTCTACAGACGAACCAAGAAGCAAGCCAAGATAGTTC CCCAACCAGAACCTGAACCAGAGAAGAAAGAAGAAGGTAAAGAAGAAGAGAAACCTGCAGCAGAGGAGGGTAAACCTGAA GAGAAGAAAGAAGAGGAGAAAGCAGCAGAGGAAGCCAAGAAAGAAGAGGGTGGTGAAGAAAAGAATGATAACAAAGAAGA AAAGGGTGGTGAAGAAGGGAAAGAAGAAGGAAAGAAAGAAGAGAACAATAACGGGGCAGTGGTTAACATGGAAGAGGAAT TAAGCATGAAGAGGATGATGTACTATTACCAGTACCCTCCACTCTATGTGATTGAACGCATGCCTCCACCTCAGCTTTTC AGTGATGAAAATCCAAATGCATGCTGCATTTCATGA
Protein sequence (LotjaGi1g1v0126300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMKMRGVEGLVIDMAKNEVTIKGIVEPQAICDMITKKTKRRAKVISPLPAAEGEPIPEVVNSQVSGPVTVELNVNMHCEA CAEQLKRKILQMRGVQTAVTEFTTGKVLVTGTMDANKLVEYVYRRTKKQAKIVPQPEPEPEKKEEGKEEEKPAAEEGKPE EKKEEEKAAEEAKKEEGGEEKNDNKEEKGGEEGKEEGKKEENNNGAVVNMEEELSMKRMMYYYQYPPLYVIERMPPPQLF SDENPNACCIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 43 | 43 | 6.0E-6 | – | |
| PANTHER | 1 | 251 | 251 | 2.0E-116 | – | |
| SUPERFAMILY | 64 | 128 | 65 | 4.32E-11 | ||
| Gene3D | 65 | 132 | 68 | 8.5E-13 | – | |
| CDD | 71 | 131 | 61 | 7.61573E-6 | ||
| Pfam | 72 | 120 | 49 | 6.3E-10 | ||
| ProSiteProfiles | 75 | 122 | 48 | 9.002 | ||
| MobiDBLite | 129 | 206 | 78 | - | – | |
| Coils | 162 | 182 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi1g1v0126300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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