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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0129200 |
| Transcript ID | LotjaGi1g1v0129200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Polyprotein; TAIR: AT5G63570.1 glutamate-1-semialdehyde-2,1-aminomutase; Swiss-Prot: sp|Q9P7V5|SEC7B_SCHPO Protein transport protein sec72; TrEMBL-Plants: tr|A0A0R0E2E6|A0A0R0E2E6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0129200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:20614674..20616205) extracted from Lotus japonicus Gifu genome v1.2.
ATTTCTTTACATCAAATTGGTCATCTACCCAAAACTCTGCCCAATCCAAACAAACGAAGGAAGACTATGCCTTCCCAATC CAAACCCTTCAGGCCTTCCAAGAACAAGGTCTAACCACACTTCCAAAAAATACTTGGGCTAGCATTGCAGATGATGATGA TAGTTACCAAGACCTACCATCACTCCAAACAATGATCCAAACCCAGAAATCCCAAGTCATTCAAGCCAATCCCAAACCAA TCCAATCAACCCTTCCCAGACAAGAATATCTCAAAAAACCAATTTCCAAATTTATCCTGTTGATCGAACCAGAGTATTGG GACCAAACTAGTGGTGAGCTTGCAGCCAATAAAACAGCTTCAAAAGTATTTCCGACATCAAGCCACCTTGAACCAATCAG CCACAACAAAACCCAAAACTTCTATGAGTTTATTCTTATAGATACAGATAGCGTGGAATTCAAACATTTTAGGGATAAAA ATGATGAATCCCTAATAACCCATTCAACTTTCCAAATCATGAGAGTTCTTAAACCTTCAGACTTTGGTAACAATCCCAAC AAAACCAAGAAATTCTCCAAAAACTTTGACCCAATAGGTTTTAATTATTGGGATTATGTCAGAGCCTGGGAAAACACTAT TCTGGGCTTCCAAAATAAGAATCTTAAACACTCCTGGCTTATCTATTTCAAGAAGGCCACCAATTACTCTTTTCCAAACT GGTTCCTCTCTTGGTGGGATTTCTTTGGACCTACAAAAGATATTTTTTCCCCCGAAGTACTGGAGGGATTCAAACATTTT TCAAAAAATTGGAATAAAGATTTAAACAACTATCCGGTTAGTTTAAATTTTTATACTATCTTTTCGCTGTCTTGGATTTT TGCATGGGAGTATTTCATTAAAACCAAAAATATTCCGGAGCTTCACAAGCAAATCTCAATCAAATGGTGGAAAACCTTTG ATGCTTCGATGGTCTCAAAAGAAAATATTGACCTTTGGTTCAGAACAAACCAGAAATATCTTAATCATGCAAGTCCTCAA TCTTGCCTCCTGCTCAACCAGAAGGCTCACATTTCTGCAGCACTCGCAGGTGCCTTTTCTGAGGAAGGTTTATTGAAAAG CCTCCAAGTTTCCCTTCAAATATTGCAGAATAATTCAAAAGACAATCAAGCATCTTCTTCAAAAGACCCTTTGCAGAAGA AAGAAAAGCATCGGATACCCTCTCAATCAGACTCTGATGCCAGTTTTGTCCCAGACAGCCTGGAAGATAGTGATGAAGAT CTCCTTTGATTTTCACCTCAATTATTGTACTTTTTACTGTAGCAAAGTTGACTTTTTTACTGTAGCAAAGTTGACTTTTT ACTGTAACTAAGTACCAAACAGTTCCGGTAGAGCTACTGGAACTATTCAAAACAGTGTTTGTTTTTCCTTTAAATAGAGT GTTCCTCCTTTGTTAGAGGACACACTTTCAGACGCGGAGAGATAGTCACGAGAGATAAACTGTAAGCATGATCTCCTCCT GCTTTCTCTTCT
CDS sequence (LotjaGi1g1v0129200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCCAAACCCAGAAATCCCAAGTCATTCAAGCCAATCCCAAACCAATCCAATCAACCCTTCCCAGACAAGAATATCT CAAAAAACCAATTTCCAAATTTATCCTGTTGATCGAACCAGAGTATTGGGACCAAACTAGTGGTGAGCTTGCAGCCAATA AAACAGCTTCAAAAGTATTTCCGACATCAAGCCACCTTGAACCAATCAGCCACAACAAAACCCAAAACTTCTATGAGTTT ATTCTTATAGATACAGATAGCGTGGAATTCAAACATTTTAGGGATAAAAATGATGAATCCCTAATAACCCATTCAACTTT CCAAATCATGAGAGTTCTTAAACCTTCAGACTTTGGTAACAATCCCAACAAAACCAAGAAATTCTCCAAAAACTTTGACC CAATAGGTTTTAATTATTGGGATTATGTCAGAGCCTGGGAAAACACTATTCTGGGCTTCCAAAATAAGAATCTTAAACAC TCCTGGCTTATCTATTTCAAGAAGGCCACCAATTACTCTTTTCCAAACTGGTTCCTCTCTTGGTGGGATTTCTTTGGACC TACAAAAGATATTTTTTCCCCCGAAGTACTGGAGGGATTCAAACATTTTTCAAAAAATTGGAATAAAGATTTAAACAACT ATCCGGTTAGTTTAAATTTTTATACTATCTTTTCGCTGTCTTGGATTTTTGCATGGGAGTATTTCATTAAAACCAAAAAT ATTCCGGAGCTTCACAAGCAAATCTCAATCAAATGGTGGAAAACCTTTGATGCTTCGATGGTCTCAAAAGAAAATATTGA CCTTTGGTTCAGAACAAACCAGAAATATCTTAATCATGCAAGTCCTCAATCTTGCCTCCTGCTCAACCAGAAGGCTCACA TTTCTGCAGCACTCGCAGGTGCCTTTTCTGAGGAAGGTTTATTGAAAAGCCTCCAAGTTTCCCTTCAAATATTGCAGAAT AATTCAAAAGACAATCAAGCATCTTCTTCAAAAGACCCTTTGCAGAAGAAAGAAAAGCATCGGATACCCTCTCAATCAGA CTCTGATGCCAGTTTTGTCCCAGACAGCCTGGAAGATAGTGATGAAGATCTCCTTTGA
Protein sequence (LotjaGi1g1v0129200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIQTQKSQVIQANPKPIQSTLPRQEYLKKPISKFILLIEPEYWDQTSGELAANKTASKVFPTSSHLEPISHNKTQNFYEF ILIDTDSVEFKHFRDKNDESLITHSTFQIMRVLKPSDFGNNPNKTKKFSKNFDPIGFNYWDYVRAWENTILGFQNKNLKH SWLIYFKKATNYSFPNWFLSWWDFFGPTKDIFSPEVLEGFKHFSKNWNKDLNNYPVSLNFYTIFSLSWIFAWEYFIKTKN IPELHKQISIKWWKTFDASMVSKENIDLWFRTNQKYLNHASPQSCLLLNQKAHISAALAGAFSEEGLLKSLQVSLQILQN NSKDNQASSSKDPLQKKEKHRIPSQSDSDASFVPDSLEDSDEDLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 217 | 217 | - | – | |
| PANTHER | 2 | 330 | 329 | 4.5E-88 | – | |
| PANTHER | 2 | 330 | 329 | 4.5E-88 | – | |
| Phobius | 218 | 236 | 19 | - | – | |
| Phobius | 237 | 365 | 129 | - | – | |
| MobiDBLite | 322 | 365 | 44 | - | – | |
| MobiDBLite | 330 | 345 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0129200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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