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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0141500 |
| Transcript ID | LotjaGi1g1v0141500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Basic helix loop helix (BHLH) DNA-binding family protein; TAIR: AT1G72210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96; TrEMBL-Plants: tr|I1MAX1|I1MAX1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0141500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:23331834..23334644) extracted from Lotus japonicus Gifu genome v1.2.
AAATTGCCAAGAGAATCTTTCTGTGTTTACCCCGTGGGTCTGTTTGTGCGATCAAGAAAATGGTCTACAAGTAGAAACCT CACGTGCAACAGAGCTGTAGCTTTTTGTTTGTATGAACAATCCTCATCGAGATTTCAAGAAAAGGGAAGGAGGGATCAGC TTTGTTCATAACTTGATCTTAAAAAGGGTCACTTTGTTTGCTCTGTTATGAACTTAGTGCAAAGTTTCTTTCTCCCTTTA TTTTTCTTTCCCAAAACTCTTCTTATTTAGCACTAATCATTGAACCTCCATCTTCTAATTTTCTCTGCCAACACTTTTCT TAAGTAGTACCTATTCTCAGATTAGATCTTCAGCCTAAACTTTCCCTTTAAGCCTCTTACATCACTACTCTCTTCCTTTT GTTTTTCTCTCTCAAACTTTTTCTCTGCTTTAGTAGTGTTTCCTTTGTGAGGTACAAGAGTCCTCTTCTTACCTAACAAT TTCAACATTTTTCAACAAAAAGTGATAAATAATGGCCTTAGAGGCAGTGGTTTTCCCACAAGATCCATTCACATACAATT ACAAAGATTACTTGTACTCTTTAGTTGGAGGAAACCCTCCAAGTGAAGGATCAAACTGGAACCGCCACGAATACGGTTCC TTTGCAGAAGAAGAGAAAGCACTTCTGGGAATCATCAACAGTAACATAGAGCACAATCTCCATGCAAATTGGGACTCTTC TACTTCTCCTTCAGTGGTTCAAAATGTCAAAGATCAATGCGATTCACACTCATCCCCAGAGGCATGCATCATCGATTATT CCTCGCCCGGAACTGACAATCTTCCTCCTTCCATCACCACTGCGGCCACCGTCACCGGTCGGCGTAAAAGGCGCCGTACC AAGAGTGCGAAGAATCAGGAGGACATCGAAAACCAGAGGATGACTCACATTGCAGTTGAGCGCAATCGAAGGAAACAGAT GAATGAGTACCTAGCTGTGCTCAGATCCTTGATGCCTCCTTCTTATGTACAAAGGGTGAGTTTTTGGTTACTCACTTTTG GTTTATGATGTGTTTGGAATTGTACTTGAAGTACTTACAATTGATTCTTCATCGTATAAGTTTCAACAGTTGCTTCCCCA TTTAAAGCTTTGATTCAAAATTTATTTTGGGTAAATGTGATAAGTTGTTGAATTTCTATAAAAAAGAAAAATTGTCAACA AGGTCTAGCATAACTCGTAAATAACTGAACCCCTTAAGCATCAATCCAAAGTTCGATTCATGAGTCATTCATGTGAAGAA GGATTTATTGAGAGAGGTCTGCATACTTAATGTGATCTTCGATGCACCAGAGATATTGTGATAGCTAGCTAGGAAACCAA AATTTAGCATTCACTCTAATTTTCAATTTGTTTCAACCTTGTGTTAATTACTTAAGACATTTATACATAGTTTGGTTGGT TCCAAAACAGGGTGATCAAGCTTCTATCATTGGAGGTGCCATTAACTTTGTGAAGGAGCTAGAGCAGCTTCTACAATGCA TGAAGGGGCGAAACATCAAAACAAAGGAACAACAACAACAATGGCATGAAGATGGTTCATCTTCATCGCCCTTTGCTGAG TTCTTCATGTTCCCTCAGTACTCTACACGTGCAACATCGGAGGGCAGCACGAGCTATCCCAACACGTGCTGCGAGGCAAC GGTGGCACAGAACCAGAACCGGCCACCTGCCGCGGCGGACATAGAGGTGACCTTGGTGGATGGTCATGCCAATATTAAGA TACTGTCAAAGAAGCAACCCGGGCAGCTTGTGAAGATGGTTCTTGGGATGCAAAGTCTTGGTTTCATCATTCTCCATCTT AATGTTACTACTGTGGAAGATATGGTACTTGCTTCTGTTAGTGTGAAGGTATAGCCTTGCCTACATTTTTGCCAGTTTCT CCTACGTTTCTTTTTTGTTGTGTTCTTATGTTTTTTTACTGGGTTAAATATGTTTTTGTCCCTACATGATAATGAATTAT TAGGTTTAATCACTCAAAAAAAAATTCTTTGAAATATATTTCTACATTTGGGAAAAAGTGAATTATTTTAATTTGTCTCT TTAAGGAACTAAAATGCCTATTGAGATTTTTTATTTTACAAAAAAAGTGTTAACTGTTTTTGTCATTATATTTATTGGAA TGTTAGGTAGAGGAAGGATGTGAGCTGAACACAGTGGATGAAATTGCAGCTGCTATGAATCAATTATCAAGCACAGTTCA AGAAGAAGCTGCTAGTTTCTGCTGAATTAAATTTTGAAGAAATATTATTAAAGCCTTTCTATCCTCTATTTTTTTTTCCT TTATCAGCTTGTAACCTCTATTGTCAACAACTGTGCAAAACTAGTATCAAAATCCTAGTAGAGAAATCACATTAATATAT AATAAGGGATAGTAGTGTGTACATGCATCTACATTTCAATAAGCTAGAAGGAGATGCTTAATAATAGAGTAATATATAGT ATAGGTTTTGTTCTGCTCTCCCAGCTACCAGAAATTAGCCTGGGAACAAAACAGACAATCGGAAGCGACACGCAATTTGT GTTGTGGGGGCTACCTGCTCGAAGCGTCTATCCACTTGTGAATTATTAGCCTTTTTTCAAGAGAACAAGCATCATTTTAT CTTTTGAAATTGAATAAGCATCTTAATTTCATTGGAATGTTTGTGTTGTGGAACTCTTACATGTATATTTCTTTTAGTCT CTAAAAGATTTCAACAAACTCAATTATTCCCTCATGCCACGTAAATGAAAAACTTCAAAGGGGAAAAATACAAATAATGT CTCACGCTATC
CDS sequence (LotjaGi1g1v0141500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCTTAGAGGCAGTGGTTTTCCCACAAGATCCATTCACATACAATTACAAAGATTACTTGTACTCTTTAGTTGGAGG AAACCCTCCAAGTGAAGGATCAAACTGGAACCGCCACGAATACGGTTCCTTTGCAGAAGAAGAGAAAGCACTTCTGGGAA TCATCAACAGTAACATAGAGCACAATCTCCATGCAAATTGGGACTCTTCTACTTCTCCTTCAGTGGTTCAAAATGTCAAA GATCAATGCGATTCACACTCATCCCCAGAGGCATGCATCATCGATTATTCCTCGCCCGGAACTGACAATCTTCCTCCTTC CATCACCACTGCGGCCACCGTCACCGGTCGGCGTAAAAGGCGCCGTACCAAGAGTGCGAAGAATCAGGAGGACATCGAAA ACCAGAGGATGACTCACATTGCAGTTGAGCGCAATCGAAGGAAACAGATGAATGAGTACCTAGCTGTGCTCAGATCCTTG ATGCCTCCTTCTTATGTACAAAGGGGTGATCAAGCTTCTATCATTGGAGGTGCCATTAACTTTGTGAAGGAGCTAGAGCA GCTTCTACAATGCATGAAGGGGCGAAACATCAAAACAAAGGAACAACAACAACAATGGCATGAAGATGGTTCATCTTCAT CGCCCTTTGCTGAGTTCTTCATGTTCCCTCAGTACTCTACACGTGCAACATCGGAGGGCAGCACGAGCTATCCCAACACG TGCTGCGAGGCAACGGTGGCACAGAACCAGAACCGGCCACCTGCCGCGGCGGACATAGAGGTGACCTTGGTGGATGGTCA TGCCAATATTAAGATACTGTCAAAGAAGCAACCCGGGCAGCTTGTGAAGATGGTTCTTGGGATGCAAAGTCTTGGTTTCA TCATTCTCCATCTTAATGTTACTACTGTGGAAGATATGGTACTTGCTTCTGTTAGTGTGAAGGTAGAGGAAGGATGTGAG CTGAACACAGTGGATGAAATTGCAGCTGCTATGAATCAATTATCAAGCACAGTTCAAGAAGAAGCTGCTAGTTTCTGCTG A
Protein sequence (LotjaGi1g1v0141500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALEAVVFPQDPFTYNYKDYLYSLVGGNPPSEGSNWNRHEYGSFAEEEKALLGIINSNIEHNLHANWDSSTSPSVVQNVK DQCDSHSSPEACIIDYSSPGTDNLPPSITTAATVTGRRKRRRTKSAKNQEDIENQRMTHIAVERNRRKQMNEYLAVLRSL MPPSYVQRGDQASIIGGAINFVKELEQLLQCMKGRNIKTKEQQQQWHEDGSSSSPFAEFFMFPQYSTRATSEGSTSYPNT CCEATVAQNQNRPPAAADIEVTLVDGHANIKILSKKQPGQLVKMVLGMQSLGFIILHLNVTTVEDMVLASVSVKVEEGCE LNTVDEIAAAMNQLSSTVQEEAASFC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 342 | 342 | 2.5E-114 | – | |
| PANTHER | 1 | 342 | 342 | 2.5E-114 | – | |
| Gene3D | 131 | 212 | 82 | 1.0E-11 | ||
| CDD | 133 | 190 | 58 | 2.15871E-14 | ||
| ProSiteProfiles | 134 | 185 | 52 | 15.459 | ||
| SUPERFAMILY | 134 | 205 | 72 | 1.44E-16 | ||
| Pfam | 135 | 186 | 52 | 3.9E-10 | ||
| SMART | 140 | 191 | 52 | 8.8E-10 | ||
| Coils | 182 | 202 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi1g1v0141500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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