Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0142700.1

Overview

Field Value
Gene ID LotjaGi1g1v0142700
Transcript ID LotjaGi1g1v0142700.1
Lotus japonicus genome version Gifu v1.2
Description Protein kinase; TAIR: AT1G78290.2 Protein kinase superfamily protein; Swiss-Prot: sp|A2YNT8|SAPK2_ORYSI Serine/threonine-protein kinase SAPK2; TrEMBL-Plants: tr|A0A0L9V066|A0A0L9V066_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0142700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:23644819..23648784) extracted from Lotus japonicus Gifu genome v1.2.

CAAAACTCCAAAGTCTCTGTTTTCATATGTGTGTTTTTCAGCTTTATTCAAAGCAAAACCAACGCCATTCACCCGAGTTA AACACTGGCTTGCGTCTTGTTGAAGTTTTGAGACTTTTGAGAGCATTTCAACCTACCTCTTTGTCCCAAAAACGAATAAT ACAGATATCAATTCTCAGCTCCACTTTTTCATTCTTCATTCTTTATTTATGTCAAAACCACAGTTCACAGCTTTGTAGAA TTTTCCCGTGATCAAACAAACACTGTATTAGTAATTAGTAATTATAACAAGTACATGGATCGCTACGAGATTCTCAAGGA TATTGGGTCTGGGAATTTTGCTGTGGCCAAGCTAGTTAGAGATATCTTCACCAAAGAGCTTTTTGCTGTCAAGTTCATTG AGAGAGGCCACAAGGTTTGGTTCTTCAAGCTAGTTTGAAGTATTTTCCTTTTTTGAGCTTTCATGCTAATTCTTCATGTG GGTATTGATTGTTTTTTGTTTTTGTGGAAATATATGTACTGCAGATTGATGAGCATGTCCAGAGGGAAATCATGAACCAT AGATCATTGAAGCATCCCAATATCGTTAGATTCAAAGAGGTTAGTAAAGTCATGATTCTAGTGATTAAAGGGTGTTGTTC TATTTTACCATGAAATTGACCTATCTATTTTTGTTAACATTATAAAATTTAGCAAAAATTGATATTCGTTTTTTGTCTTC ATAGATCCTTGTTATTTTGCTGCTTATATACATACTCATCTAGCCTCTTTGTTTAATTTAACATCTATGGTTTGGATTTT TTTTTCCTATGCAAAACTTAATTTGTATTAATATATGATAACGTGAATATCTCCAAAATAAATACATGTGCTGATGTGCA TGTAAAATGTGAGGTGTAGAATGTCCGTGGCGGTAGAAAGTACTAACACACTCGCTGTGTTCCCGACTCAGTAATGTAAT ACACTTACACTAGCTGAGAGATAGAAAGAGAAGAGAGAGAAATGAAAGATATGATAGATGATGTGATAGGAAAAAAAAAG AGATAAAAAGAGAAATCAATGGAAATAAGATCGAAGAGGAAAAAGATCAAAACTCTTTCAGACTAGGAAGCAAATTCCTT ATTTCCATTTTTAAAAGCAAAGACAAATCAATTCAGAATTTCTAACACAATGAAAAAGAATGATGAATTTTGATAAAAGC AGAACATTTTGGAAGTGAGAACCAGAATTGGGGTAACTGAAGCTTATCTCCCGTTCAACCCTGTCATTAGTACTGAAAAT TGCACACAATATTCTAGTATTTGTTTTTTTTAAAATAAAAATAGCTTAAAATGACATGTTAATAAGTGACTTGCCACATG TCTATAGTCATAGAAAGTATCCCTATTTTCTGTTTTCTCCCTTTCCAGTGTTCAATTTTGTTGTGGTTGGTAAAAGTATT GGTGTATGTTCTTCCCTATGAATGAATTTCATATTGAACCATGTATTTTTTTATCAATGCCAACATAATTATGTTGGAAT AATATTCCAATTAGTTTATACGGGTAAATAAAGAATAGATCCTTTGTGTGAGCTTTGATGACTCTACTTGCAGGTCTTGC TGACACCAACACATCTAGCCATAATAATGGAGTATGCTGCTGGAGGAGAACTCTTTGAGAGGATATGCAATGCGGGTAGA TTCAGTGAAGATGAGGTAACGTAGGAAATGGAGATACTATTAGAATAGTTTATGTAATTTCTGTATGGCATTGGTTACAT ATTGTGTCTGTGGAGAGGTGTCCATTTGAGCAAACCGGAAAGGTGTACATATTTGGTAAACTTTTTCTGTGAAGCTTGAA TATTCATTACTTCATTCAGAAACATTGGTACTTAATTCTTGTTATTTTGCATCAGGCAAGATTTTTCTTTCAGCAACTGA TATCAGGAGTAAGTTACTGTCATTCAATGGTAAGAAACTAAACCAAACCTTTATCGTGAATCTTGTACCTATGAATAGAT TTCATTGTTAAAGGAAAGTTGATGCAGCAAATCTGTCATAGAGATCTGAAGCTTGAAAATGCACTCTTAGATGGGAGCAG TGCGCCACGAGTCAAAATTTGCGACTTCGGTTACTCAAAGGTAGCCATGTTAACTAGTACTACAGCTCTAGATGACGCCA TCTTCGTCAAGTGGTGTTAATTTGTTTTTACGTTGTCTTTTAGTCATCTCTATTGCATTCACAACCAAAGTCTACCGTAG GAACTCCAGCTTACATTGCACCTGAGGTCCTAACGAGGAAAGAATATGATGGAAAGGTTAAATCTTATTATTCCTCATAG CTTATTCTTGGTCTTGATTTTTTAAGTTTTTACTGTGTAAAGAAAGGAAATATTTTCTGTATCTCTTTCTTTTCTAACCG AATACTTTCCTTGATTTGTATAGATTGCAGATGTTTGGTCTTGTGGAGTCACCTTATACGTGATGTTAATTGGGGCTTAT CCTTTTGAAGACCCAGAGGACCCGAGAAACTTTAAGAAAACCATTGGTGTGAGTATAACTGCAAACTTATTGAACCTCTA AGCAAAATGAAGTCTAGAAATACGAGTGACTGTTTAGTTAAACTTCTCTGATATGGTGTTTCAATTGGACCATTTTTCGT TTGTTACAGAGGATACTTAGTGTTCAATACTCAGTTCCGGATTATGTACGAGTCTCCATGGAATGTAAACATCTTCTATC ACAAATATTTGTGGCGAGTCCTGAAAAGGTACGGGTTTGATGTCTAAAATATATTGTTATTTTCATCATATACAAACTCC TACTAGGTTCTAGCTACAAGATTTAATGCTGAGTTTCTCTTCATATATATATTTTCTCATAACAATGTATGTTTGAGTGC TTTTGTCCCCTATGTTGGCTTCAACAATGTGCGGTTTGTGGGTTCTGGGCCCAATGCAAGCAATGATTATCTATTCCTAT CTTTGGCATGTTACTTAAAATCTTCCATTCAAATGCATGTAGCTTCCTTTTCAATCTCATTGAGAAATTGATGCATTTTG CAGAGAATAACAATGCCAGAAATTAGAAACCATCCATGGTTTATGAGGAACTTACCTATAGAATTAATGGAAGGTGGAAG CTGGCAAAGCAGTGATGTAAATAATCCATCACAAAGTGTTGAGGAAGCCCTGTCCATTATACAAGAGGCAAGAAAACCTC TTAATATCCCCAGGGCTGGTGGCCTTCTTACTGGAGGCAGCATGGACCTAGATGACTTGGATGCTGATGCAGATCTTGAA GATATAGAAACTAGTGATTTTGTGTGCCCTCCTCTTTAAGTGTATACATGAACAAACTAAGCTATTATTTGCTGTGAAAA TGTAAATAGCTTTTTCTAGGTGGGGGCTGAAATTCCTTAAGCCTTGGTGCTACAGTAAAAAGTTGTTGCCTTGTGATTGA GGTTACGGGTTCAAGTCCTAGAAACAACCTCTTGTGTAAAAAACAGGGTAAGGCTGCATACAATAGACAAAGTAATCAGA CCCTTCCCCCGGACCTCATGCATAATGGGAGCTTTAATGCACCAGGCTGCCCTTTTTTATTAAGATCAGTGCTCCACTTG TATGTTTTGTTATATGTTAGTTTGACAAATTTTGGGGGCTTAAATTCCTGCTATTCTTTTTGTCCCCCTCCTCCTATCAC GCGTTTACACAAGTGGATATGATCAAATTTTGTAACTTAAGATGGAATTACCATTTTGCTAGAGATGCAATGTCATATGA AGTTTTTCAAAATGGAGAATGTTAAGTAAAGCAAGTGTTGATAAGTTTCACTTTTGCCTCTATGGAAAGTTGGAAACTGT GATATTATGGGGAATCAGAAAAGTTCACTGATATAGTGGACTTCATATTGTACAGTGAGAATGGAGCATCATATTCATAG GGTGCTTCTGTAGCCTTGAAGCTGTTCTCTTCATATGATCAATTAC
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0142700.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATCGCTACGAGATTCTCAAGGATATTGGGTCTGGGAATTTTGCTGTGGCCAAGCTAGTTAGAGATATCTTCACCAA AGAGCTTTTTGCTGTCAAGTTCATTGAGAGAGGCCACAAGATTGATGAGCATGTCCAGAGGGAAATCATGAACCATAGAT CATTGAAGCATCCCAATATCGTTAGATTCAAAGAGGTCTTGCTGACACCAACACATCTAGCCATAATAATGGAGTATGCT GCTGGAGGAGAACTCTTTGAGAGGATATGCAATGCGGGTAGATTCAGTGAAGATGAGGCAAGATTTTTCTTTCAGCAACT GATATCAGGAGTAAGTTACTGTCATTCAATGCAAATCTGTCATAGAGATCTGAAGCTTGAAAATGCACTCTTAGATGGGA GCAGTGCGCCACGAGTCAAAATTTGCGACTTCGGTTACTCAAAGTCATCTCTATTGCATTCACAACCAAAGTCTACCGTA GGAACTCCAGCTTACATTGCACCTGAGGTCCTAACGAGGAAAGAATATGATGGAAAGATTGCAGATGTTTGGTCTTGTGG AGTCACCTTATACGTGATGTTAATTGGGGCTTATCCTTTTGAAGACCCAGAGGACCCGAGAAACTTTAAGAAAACCATTG GTAGGATACTTAGTGTTCAATACTCAGTTCCGGATTATGTACGAGTCTCCATGGAATGTAAACATCTTCTATCACAAATA TTTGTGGCGAGTCCTGAAAAGAGAATAACAATGCCAGAAATTAGAAACCATCCATGGTTTATGAGGAACTTACCTATAGA ATTAATGGAAGGTGGAAGCTGGCAAAGCAGTGATGTAAATAATCCATCACAAAGTGTTGAGGAAGCCCTGTCCATTATAC AAGAGGCAAGAAAACCTCTTAATATCCCCAGGGCTGGTGGCCTTCTTACTGGAGGCAGCATGGACCTAGATGACTTGGAT GCTGATGCAGATCTTGAAGATATAGAAACTAGTGATTTTGTGTGCCCTCCTCTTTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0142700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDRYEILKDIGSGNFAVAKLVRDIFTKELFAVKFIERGHKIDEHVQREIMNHRSLKHPNIVRFKEVLLTPTHLAIIMEYA AGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENALLDGSSAPRVKICDFGYSKSSLLHSQPKSTV GTPAYIAPEVLTRKEYDGKIADVWSCGVTLYVMLIGAYPFEDPEDPRNFKKTIGRILSVQYSVPDYVRVSMECKHLLSQI FVASPEKRITMPEIRNHPWFMRNLPIELMEGGSWQSSDVNNPSQSVEEALSIIQEARKPLNIPRAGGLLTGGSMDLDDLD ADADLEDIETSDFVCPPL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24343:SF336
1 331 331 1.4E-185 –
Gene3D
G3DSA:3.30.200.20
1 79 79 2.0E-30 –
PANTHER
PTHR24343
1 331 331 1.4E-185 –
SUPERFAMILY
SSF56112
2 269 268 3.24E-82
IPR011009
CDD
cd14662
3 259 257 0.0 –
ProSiteProfiles
PS50011
4 260 257 46.944
IPR000719
Pfam
PF00069
4 260 257 8.0E-70
IPR000719
SMART
SM00220
4 260 257 2.0E-97
IPR000719
ProSitePatterns
PS00107
10 33 24 -
IPR017441
Gene3D
G3DSA:1.10.510.10
80 267 188 1.1E-60 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0142700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…