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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0144100 |
| Transcript ID | LotjaGi1g1v0144100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; TAIR: AT1G78240.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9C9Q8|PMTT_ARATH Probable pectin methyltransferase QUA2; TrEMBL-Plants: tr|V7B8K2|V7B8K2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0144100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:23957661..23964121) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAAATCTATTAGAAGAAAAGGTCGACCAATCATATAAATGTTTTCGGCTCAAACATGATTGTGTATCGAAAAGACTA AGTAAGAAAAAATAGTGCTTTCAGCAAGCAGTGTGTCTGTGATCGGATCAGTACACTACAAAACCTGGTTGCTCAACCTC AAAGACTCATTGTCTGTGCTTCAGTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCATTCTC TCTTCTCTCTCTTTGATTTCCAAGGCACCGTAATCATTCGTCACAGTGAGAGAGTAGAAGAAGAAGAACCATTGATCCTC CACACACACACAGAAAAACCAAAACCAACAAAATCTTCAGCTCTCATTGTGTTTTGTGTTGCAAGCAAGCAACCAAAACG ACACTCATTTCTCGGGATTCTTTGTCCCTCTCTTCATTCAACACTGCTCCTGTTCTTAATTCTCTTCAATCAAACAAAGA GGTAGCTACTACCCTTAGTTTCTTGCTTCTGATTTGATCTCAAGTAACACCAAATGGGTTTTTGTGTGATACCCAGTTAA GATTTTTCCCCATTTTTCAAAGAAAATGAGCTTGTTTGTGCTTGAATTATTGTAACTTGCAAGTAGCAATTTCACTGTTC TGATAGTGTTACTCACCAACCCACTTGCAATAACCTCTCAAGTTTTATTTTTTTTTTCCTCCTCTATTATGAGTATTGGT ATATATCCATTTCAATACTGGGTCCGTGATTAATCTGAATGCGGTGAATTAATTACTAGTCATCTGTCTTGTCCTTATTC CCCTGTTTTTCTCTTTCTCTCTCTTGATTCTCTCTCTTTTTTAAGCACACTGCCATCAAATCCTGTTTGATTTTAGAATA ACACTGTTTTTTTGGATTTTAGGCTTGCAATCTCTCAACTGGACCTGGTTTCTCTAAATGGTTTCTGGGTGTGTTTGAAC TTTGAAGTAAGTGTTAATATCATTAATAGTTGAAGGTTGAAGTTCTGTTGTTCTTTGTGTGGAGCTTTTTTTTGGTTTGG TCAGAGAATGTCCAGGCCTCTACATCGAGGTGTGTCTGGATTTCGTGTCCCTGACAGTAGCAATGACTTGTGGGACTCTC AATCCAAAGATAAACCAGAAAGAGAAGATTTTGATAAGAGGGGTTCTTCAGATCATAGCCCTCTAGCACTGAAATTTCCT TTGAAGGTTCTTTTTTCTGATAATAACAACAATTCTCCTTCCAAATATGGCAATGGAATCACTGAGAATGGTTTTTCATC TGATCCATTCTTTGTTGGATCGCCAAGAACCCGGGTTAAGTTGATGCTGCTTTCATTGAAGATTAGTTTAGTGTTTATAG TTGTTCTTGCTCTTGTTGGATCTTTTTGGTGGACCCTATCTATGTCATCCTCATCAAGAGGTAGAGTTTACCATGGTTAT AGAAGGCTCCAGGAGAAGCTGGTTACAGACCTGTTGGATGTTGGTGAGTTATCTCATGGCTCCTCCAAGGTGAAAGAATT GGAATTCTGTTCTCCTGAGCTGGAAAATTTTGTTCCTTGCTTTAATGTTTCTGATAATTTAGCTTCTGGTGGCAACGAGT TGGACCGGAAATGTGACGGCGAGCTCAGGCAAAGTTGTTTGGTCCTCCCACCTGTGAATTACAAAATTCCTCTTAGGTGG CCTACTGGAAGAGATGTTATCTGGATTGCTAATGTGAAAATCACTGCACAGGAGGTTCTTTCTTCTGGAAGCTTGACCAA GAGGTCAGTAACATACATATGTCCTCTCACCTTGCTGTAAACACTTTCAGCTATGTTTTTCTAACTTTTATTTGTAATTG ATTACAGAATGATGATGCTGGATGAAGAGCAAATTTCGTTTCGTTCAGCCTCTCTTATGTTTGATGGTGTTGAAGACTAC TCACATCAAATCGCGGAAATGATTGGACTTAGAAATGAATCTTACCTTATACAAGCTGGGGTAAATACATCTCTGCTCTC TATTGAAATTGGCATATTGAGTGTTTGTTTGTTTGTTTACATGTATTTCACTGATTTGGTACATGCTTAGTTGAAATCAG CATACATATGCCAACTATTGTAGTACTTAGTTTTGACAATGGAATTTGTTTCTCCATTGACGTTGAGCACATAGAACAAC TTAGCAACATATGGAATCAGCATACATATGCCAACTATATTGATGGACTTGAACTTTTTGCAAAAATCGTTTGTCTAAGT GCTTGAAACTTGAAAGTACTTGTTTTAGATTTTCTGATGAGTTATGGTGGTGACTTTGAAACATTCCTGAATTGGCATTT GATTGAGCATGTTGGCATCTTAAAATTTACAGGTTCGAACCATACTAGACATAGGTTGTGGGTATGGTAGCTTTGGAGCG CACCTTTATCAAAGTCAACTTCTAACTATGTGCATTGCAAACTATGAGCCTTCTGGCAGTCAAGTTCAGCTCACTCTCGA GAGGGGTCTTCCTGCTATGATTGCTTCATTCACTTCAAATCAGCTGCCATATTCATCTCTGTCGTTTGATATGTTACATT GTGCTAGATGTAACATTGATTGGGACCAGAAAGGTATCTTTCAACGTTTAATTTATGCTACCTTCTGTTGGATAAACCTG CTTCTATCATGATGAGAAAGTCATTGAGAAAAATTCTCATCATTTGTTGCACATGCGCATCCTCTTTGTTTAGCAAATAT CATGAATTTACTTGAGCCACTATGACATGATGCATCTTCTAGCTGCTAATGCAGACATATTAGAAGCAAAATAAGTGATA CCTTTTATTGTTTATTTGCCATGTTTGTTGAAGTATCGTACTAAACGTGGTTAACTTTTGAAAGTCTTCTTTCTTATATC TGTGTGAATTCGTTGAAGTAATCCTTCTTGTTTATTCTGCTTTATTATCCCCCCTTTTATGTTCAAACTAAAATTCTTAC AACTTTGATCTAGCATGGGAAAACTTTGTTTATGTTGGAATTTTGTTAATATTTAGCACATTGTGATCTTATTGACATTC ATATTACTATGTATAGATGGACATCTCTTGATTGAAGCCGATAGACTTTTAAGACCGGGTGGATACTTTGTCTGGACATC ACCACTTACAAATGCTCGCAACAAAGAGAATCAGAAAAGGTGGAAGTTTGTGCAAGATTTTACAGAAAAGCTTTGCTGGG AAATGTTGTCACAGCAAGATGAAACCGTTGTATGGAAGAAAACTAGTAAAAAGAGTTGCTATTCTTCAAGGTAATGTTGC CGTACCTGTAGAAATTTCCAGTAAATAGATTCTATACATTTGTCTGCCACTTGAAAATTAATTTTGCCCTGATTCATAGC ATTGCCTGATTATTTTTTACTACCAGAAAGCCTGGTTCCGTCCTTCCTTTGTGTGGTAGAGGTCTTGATGTGGAGTCTCC CTATTATCGCGAACTGCAAAATTGCATTGGAGGAACACAGAGCAGCCGTTGGGTTTCAATTGAAAAAAGAGAAAGATGGC CTTCTCAGGTTAACTTGAACAAGAACAACTTAGCAGCATATGGTAATTGTTATTTTCTCAACAATGACCTATGGAGTTCT TCATGCAAGTGATTGCATTGTAATTGTGCTGTCTTATTGAATTGAATCGAATCTCCTATTAACTTAGTATATCCATATTT TAATGTGCTAGGGTTACAGTCTGATGAATTAACTGAGGACTCTGACATGTGGAGAACAGCAGTACAAAATTATTGGTCAC TCCTTTCGCCTATAATATTTTCTGATCATCCAAAGAGACCTGGTGAAGAGGACCCTTCACCGCCTTACAACATGTTCAGA AATGTGCTAGACATGAATGCTCATTTTGGTGGCTTCAATACTGCACTGTTGCAGGCTAGAAAGTCTGTGTGGGTCATGAA TGTGGTCCCAATAAGTGGACTGAACTATCTTCCCTTGATCCAGGACAGAGGTTTCGTCGGCGTTTTGCATGATTGGTATT TTCATCTCTTTCCTCTTGTTCTTATTTCAAATGCCTTGCTTCTCTGCTTCCATCTGTTTGTTTTGCTTTGCCTTAGTATG GATTCTCTGGCATATGCTATATTCTTTCTTACATTTTCTTCAAATTTGGTCCTTTCTAAATACATAGAATTATTGGTTTT TCTATTCTTTTGGGGTAAAATCTGAAAGCTGATTTCTTGATGTGGGTCTAACTATTTTTCAGTAATGGTGTATAATATGC ACACTTTTTGAACACACTATAAGTTTATGTAGATGTAGAAGAATTCAGATATTCAGATATTTGTAAAAAAGTAAAATACA GTAATAAATTTGTGACTCGTCAGAAGTCAATAAAGGGGAAGTTTATAAGGTATACACCATACACACTAAATTAAATTAAA TTGCAGAATTCCCCCATGGACTCATTGATCATATGGAAAGGTTTCAGTTGTTTTGTTAAGTAAATCTAGAATTAGAAAGC TACATATTTTAAAGAAATCAAGCTTCTTGTCTACCCTTTGCTCAACAAAGAGTTAGAATATTTCACCATAGCTGGCTTAG AGGCTTGATAAGATTCTTTGATGAATAGTTTCTAAGTGCTAGACTGATCATGGTTTTCTTACCATTATGATTTTTGGTGG TTTCTAGGTGTGAGGCCTTTCCAACATACCCGAGAACCTATGACTTGGTGCATGCAGCGGGACTTCTATCTCTTGAGACG TCCCAGCAGCGCAGATGCAACATGCTTGATATGTTCATTGAAATTGACAGGTTGCTTCGCCCAGAGGTATATGACTTAAT ACTCTGCACATTGCGCTTCATTCATGTTTCCTCCCCTCCATTTATTTACATTGACATTGTTTCCTGATACAAGTGATTTT AATTGGTTGAGCATCAATTGATTTGAGTATATAATGTACTATGATTGTAAATTTTCTGAGATATTAGTTTGGTACAGGAT TGCAGGAAGTTGTAACTTTTAGCTCCCATCACTAGACAAGGCCACTGAATATGCATTATTTTGTGACTTGCTTAAAAAAA TATATAGTTCCATTTTTAATGTGTTTAGGAATAGGATCTTGTGGACACTGTTCTATGCTGGCAAATTGCATTGAACATTT TTTCATTAATTTCATACATCCTGATCCTGATCCTGCTGAAAGTTGCTTTCTAAACCATATTTTAAAATTACCTGTTGTAC ATGTAATTTCTATTATCAAAACTGCTACAAGATTTGCTCATCAAGTAGTGTATTAATGTGTGAAGGAATTAGGAAGCCCT TCTATTGTGCACAGTTTCTGAGTATGATCTGCATTGTCTTGCTACATTTTTTATTTTTCTTTGATAAATACTAAAAGTGA AAACACCTCAAAATGTTTCATCCCCTTTGATTTTGAGCTATGTTGACTTATAATCTGATATGCTTGCATGGGTCTTGTAA CAGGGTTGGGTTATAATTCGCGACACAGTTCCTTTAATAGAATCCGCTAGAGCTCTAACAACACAGCTGAAGTGGGATGC ACGAGTTATAGAAATTGAAAGTGACAGCGATCAGAAACTCCTGATCTGCCAGAAACCTCTCATCAAGAGACATGCAAGCT ACTAATTAATTGAAGGCCAGAAGCAATTAGACCATAATATACTACACATATATACATTTCCATAATGTTCGTCACTTCAT TTATCATCATAAAAGCTCTGCCATACAAAGTGGGGATTGAAAATTTTGAACAGAAAGGAAACAGAGAAAGCAATAGAGGA AGCAGTGTTTCCTTGGCAATGATACCACACCACATCTCCTATGTAGCCACAAGGTGTGCATAGGACCATGTAATTACCAA ACAAGAAGCAAAGCAGCAGTTGGGAAAGAATACTGGTAGATTTACTTGTGTCTTGTTATAGTTACACAAAAAACACAAAT ATTAAGATTGGGAAGATTATATGATAGAATAAGTTATTGCTGGTTACTGTGGTGTATAAAAATGCTTAGGTATCAGTTCC CCTTCTATTATAGAATTATTTTTCTGCTTTCAATTTTTAGCTTCTTTGATGTTGTCATCTGCTTGTTCGGAAATCCTTTT GCAATTGATTCTAAAATAAAAATAACTTATGGGAAGGAACTTCTGTGAGTAGCTACTGTGTGTCATAGTTGATAGGTGAG GAAATAAAAGTTGATCCATACTCCAAGGCAAAACTGTGCTTGATAGTTTGTCAAAGTTAACAACTGGTATCCAATCCGTG CAACGCACGGCACAATTTAAACAACATTGCACTTGGAAAAAACAAAGCCAACATAGTTTTATTATAAATATAGATGGAGT AATAGTTAAAGAAAATATTGTGCTCGTAGATGGAGTAGTAATAGTTAAAGAAATAACTGATGTTGCTTTGCGTATACGCC TCTGGCATCCTCAGATATTCCTAAAATAGGAAATACAACCAAAAAGCAGTAAATGTAAGAG
CDS sequence (LotjaGi1g1v0144100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCAGGCCTCTACATCGAGGTGTGTCTGGATTTCGTGTCCCTGACAGTAGCAATGACTTGTGGGACTCTCAATCCAA AGATAAACCAGAAAGAGAAGATTTTGATAAGAGGGGTTCTTCAGATCATAGCCCTCTAGCACTGAAATTTCCTTTGAAGG TTCTTTTTTCTGATAATAACAACAATTCTCCTTCCAAATATGGCAATGGAATCACTGAGAATGGTTTTTCATCTGATCCA TTCTTTGTTGGATCGCCAAGAACCCGGGTTAAGTTGATGCTGCTTTCATTGAAGATTAGTTTAGTGTTTATAGTTGTTCT TGCTCTTGTTGGATCTTTTTGGTGGACCCTATCTATGTCATCCTCATCAAGAGGTAGAGTTTACCATGGTTATAGAAGGC TCCAGGAGAAGCTGGTTACAGACCTGTTGGATGTTGGTGAGTTATCTCATGGCTCCTCCAAGGTGAAAGAATTGGAATTC TGTTCTCCTGAGCTGGAAAATTTTGTTCCTTGCTTTAATGTTTCTGATAATTTAGCTTCTGGTGGCAACGAGTTGGACCG GAAATGTGACGGCGAGCTCAGGCAAAGTTGTTTGGTCCTCCCACCTGTGAATTACAAAATTCCTCTTAGGTGGCCTACTG GAAGAGATGTTATCTGGATTGCTAATGTGAAAATCACTGCACAGGAGGTTCTTTCTTCTGGAAGCTTGACCAAGAGAATG ATGATGCTGGATGAAGAGCAAATTTCGTTTCGTTCAGCCTCTCTTATGTTTGATGGTGTTGAAGACTACTCACATCAAAT CGCGGAAATGATTGGACTTAGAAATGAATCTTACCTTATACAAGCTGGGGTTCGAACCATACTAGACATAGGTTGTGGGT ATGGTAGCTTTGGAGCGCACCTTTATCAAAGTCAACTTCTAACTATGTGCATTGCAAACTATGAGCCTTCTGGCAGTCAA GTTCAGCTCACTCTCGAGAGGGGTCTTCCTGCTATGATTGCTTCATTCACTTCAAATCAGCTGCCATATTCATCTCTGTC GTTTGATATGTTACATTGTGCTAGATGTAACATTGATTGGGACCAGAAAGATGGACATCTCTTGATTGAAGCCGATAGAC TTTTAAGACCGGGTGGATACTTTGTCTGGACATCACCACTTACAAATGCTCGCAACAAAGAGAATCAGAAAAGGTGGAAG TTTGTGCAAGATTTTACAGAAAAGCTTTGCTGGGAAATGTTGTCACAGCAAGATGAAACCGTTGTATGGAAGAAAACTAG TAAAAAGAGTTGCTATTCTTCAAGAAAGCCTGGTTCCGTCCTTCCTTTGTGTGGTAGAGGTCTTGATGTGGAGTCTCCCT ATTATCGCGAACTGCAAAATTGCATTGGAGGAACACAGAGCAGCCGTTGGGTTTCAATTGAAAAAAGAGAAAGATGGCCT TCTCAGGTTAACTTGAACAAGAACAACTTAGCAGCATATGGGTTACAGTCTGATGAATTAACTGAGGACTCTGACATGTG GAGAACAGCAGTACAAAATTATTGGTCACTCCTTTCGCCTATAATATTTTCTGATCATCCAAAGAGACCTGGTGAAGAGG ACCCTTCACCGCCTTACAACATGTTCAGAAATGTGCTAGACATGAATGCTCATTTTGGTGGCTTCAATACTGCACTGTTG CAGGCTAGAAAGTCTGTGTGGGTCATGAATGTGGTCCCAATAAGTGGACTGAACTATCTTCCCTTGATCCAGGACAGAGG TTTCGTCGGCGTTTTGCATGATTGGTGTGAGGCCTTTCCAACATACCCGAGAACCTATGACTTGGTGCATGCAGCGGGAC TTCTATCTCTTGAGACGTCCCAGCAGCGCAGATGCAACATGCTTGATATGTTCATTGAAATTGACAGGTTGCTTCGCCCA GAGGGTTGGGTTATAATTCGCGACACAGTTCCTTTAATAGAATCCGCTAGAGCTCTAACAACACAGCTGAAGTGGGATGC ACGAGTTATAGAAATTGAAAGTGACAGCGATCAGAAACTCCTGATCTGCCAGAAACCTCTCATCAAGAGACATGCAAGCT ACTAA
Protein sequence (LotjaGi1g1v0144100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSRPLHRGVSGFRVPDSSNDLWDSQSKDKPEREDFDKRGSSDHSPLALKFPLKVLFSDNNNNSPSKYGNGITENGFSSDP FFVGSPRTRVKLMLLSLKISLVFIVVLALVGSFWWTLSMSSSSRGRVYHGYRRLQEKLVTDLLDVGELSHGSSKVKELEF CSPELENFVPCFNVSDNLASGGNELDRKCDGELRQSCLVLPPVNYKIPLRWPTGRDVIWIANVKITAQEVLSSGSLTKRM MMLDEEQISFRSASLMFDGVEDYSHQIAEMIGLRNESYLIQAGVRTILDIGCGYGSFGAHLYQSQLLTMCIANYEPSGSQ VQLTLERGLPAMIASFTSNQLPYSSLSFDMLHCARCNIDWDQKDGHLLIEADRLLRPGGYFVWTSPLTNARNKENQKRWK FVQDFTEKLCWEMLSQQDETVVWKKTSKKSCYSSRKPGSVLPLCGRGLDVESPYYRELQNCIGGTQSSRWVSIEKRERWP SQVNLNKNNLAAYGLQSDELTEDSDMWRTAVQNYWSLLSPIIFSDHPKRPGEEDPSPPYNMFRNVLDMNAHFGGFNTALL QARKSVWVMNVVPISGLNYLPLIQDRGFVGVLHDWCEAFPTYPRTYDLVHAAGLLSLETSQQRRCNMLDMFIEIDRLLRP EGWVIIRDTVPLIESARALTTQLKWDARVIEIESDSDQKLLICQKPLIKRHASY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 94 | 94 | - | – | |
| MobiDBLite | 1 | 43 | 43 | - | – | |
| MobiDBLite | 22 | 43 | 22 | - | – | |
| PANTHER | 60 | 693 | 634 | 0.0 | ||
| PANTHER | 60 | 693 | 634 | 0.0 | – | |
| TMHMM | 94 | 116 | 23 | - | – | |
| Phobius | 95 | 117 | 23 | - | – | |
| Phobius | 118 | 694 | 577 | - | – | |
| Pfam | 168 | 685 | 518 | 6.3E-142 | ||
| SUPERFAMILY | 202 | 389 | 188 | 4.99E-17 | ||
| Gene3D | 257 | 437 | 181 | 2.3E-11 | – | |
| SUPERFAMILY | 499 | 652 | 154 | 1.09E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi1g1v0144100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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