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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0159300 |
| Transcript ID | LotjaGi1g1v0159300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Filament-like plant protein; TAIR: AT1G21810.1 filament-like protein (DUF869); Swiss-Prot: sp|Q8LLE5|FPP_SOLLC Filament-like plant protein; TrEMBL-Plants: tr|A0A1J7HV06|A0A1J7HV06_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0159300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:29482391..29487716) extracted from Lotus japonicus Gifu genome v1.2.
ATCAATAATAATTATATATAGCTAAGAAAAAACAAGAAAAAGAAACTCCAAATCCATTATTATCTTCTACCTGCTGTGTT GTTTTGCTATGTGAATGCTCACTCACTCACTGTTACTCTTCTTTCTGACATTCTACAGGTTTTTTTTTTTTTTTTTGCCT CTGCCCATTTTAATTATTGTTTTATTTTATTTATTTATTTATTTATTTATTTATTGTCATTTACTACCATTGTTGAGTAT CTTCTTTTTCTTCTCTTCTACACACACTTTCTGACACTCTCTCTTCCCTTCCTTTGCTTCCATTTATTGTTTTCTTGGTT TGGTTGAGTTGGCATCAACTGGTCAAAGGTATTTTGATCTGGGTTTTTCTTTTTGTTACTTGCATTTCTCTGTTCACTGA TAACTAGTTGTGGCATTAAAGAACTGATTTTTTTACTATGCATTGGAATTTTGGGGTTGTTTGAGGCATTTTCAGTTCAA TGGCTCAAATGGGTAGCTCATGTTTTAGGGTCTTTTCAACTGGGTCTTCGTCGGTAACATGCTTGACCCTTTTTTTTTTT TTTTTTATTAGTCCATTTTTCTGCAATTTAGCTACTGTTTCATTACCCTGTGTTGTTATGTAGCTATTGTATTTTCAAAT TTCAATCCTGTGAAGAAAAAAAGGGGTCTGAATGATTTCCAAGAACTATGTTTTGCTAGTGATTCTGGAGCTAAAAGATT TCTTCTTTTCAATTTTTTACATGGTTTGAATCTAGCTAAAGTCTCTTACTTTTATTCTTATAGATTGTGAGTTTCTTAGC AAAACTGGTGGATAATACTTACCAAAGTTATCTGCTTTTCAATTTTATTTTATTAATTTTTGAACTTTTTGAAATTTTTT GAACCACTGAGATTGTAGAAGAGGGAATGTGTTTCTGGGTTTTGCTTTCTGAAGGCTAGGGCATGTGGGTTGGGATTATC TGTTCTGTAACAAGCTGAAGACTTGGCTTCAGCTTTTTCATCCTTTCTCTTTGTTGTAATATTGAGAACATTTTATTGGC AAAAAAAAAAGAGAGAACATTTTGAACAAGATTTTGCATTGGGGTTTTGAGTGAGCTTCTGAACATTTTGGGTACTGATG CCTGCATATGAATGCCCTGCAGTTTTCAAGCTAGTTTTGGATTGTTAGAAAGACCCGATAATGACGGATAAGAAGAGATG GTTTCGGAAGCGGAAGTCTTCTGAGAAGAGCTCTGGCGATACTGAAAGTTCAGGATCCGTTTCATCTCATTCTGAGAGGT ACTCAGATGAACAGGTAAGATAAACAATCCAGAATCAATAACAAAATGTGGTGTACCCTAATTTGCATTTGGTTCCTTGA GATATATGAGGTCTTTTTTATATCATACTAGACACAAGATTTGAGTTACAATTTGACTCCTTCCTTGTATGGAAAACATT AGATTCCTTACTTACCAGTGGATGAATTTAATCATTGACTTACTGGCTAGCTAAGATTGTTTTCACTGGCTGTTCTATTC CATCTCTCCTGTTTTCTGCAATATGATGTCCTAATTTGAGATAAGTAAAAACCATAAAGTTGTGCTCATAATCATAATAT ATGAGTGTTTTGCTAGATATGTTTACTCTTGAATCTGGTGTAATCAGTAAATTTTCTGTAAAATGAGAAACTGAAAAGAT TGAAAGAAAAAAATCTCTTGCATTGTTGAGTTCTTTCAGTAAAGCCATGTTCCACAATTAATTATTCTCCCTAGACATGT TCAGGTAGAAGCTATTAATTTAATGATCATGAAATGATAATAACAGAAAATGTAGGGTGTTTTCATTCTTCTGGTCTATC TCCAGCCGGGAAAAAAACAATTTTATTTCTGTTTTGGCATAAATTGCTTGAATAAGTGAGTGACCTGAAGACTTGTCTCA TTAATTATTCAAGTTTGATGTACCAATGCACACACATCTGAAATTAAGTACTCACTTTGTAGCTCTTCTGAAAATGGCTC CAGTGGGGCCAATGTTGAGTGCATTCAAGAATGTATTGTTTTAAGTTTTAACAATTTCCTTTCCAAGTTTATTTTTATGC CTTTCTCAACCTGGAAATCAACTTGTGGTCGTGTAGTAGTGTCTTTATGTAATGACCATGTTACTATATTGCACGAACAG AACAAAGTTTACCGTCAATGTTTATCCTTTTTTTCCTGATAAGTTTAGAATTTTTTGTCTGATATTTGAAAGCAGGAGGC CTCAAAGGAATCTCCTAACGGAAGCAATCAGTCCCCTGATGTAACCTCAAAAGTCACGGCCTGTGCTGAAGATGTTAATG ATATTTCCATTATCAATGCACAATTGCCTGAAGAAATCACCCCAAAACCTGTACCCACTACAGGAATCATAAATCGTTGT TCAGTAGAGGAAGATGAAAATGGAGAAAATAGAAATATGCAAAATGGAAACGAAGGAGACCTAAATGATGGTTCAAGGAA TATATCTGAGAGGCTATCTGCTGCACTTGTGAATGCCAATGCCAAAGAAGACTTGGTTAAGCAGCATGCCAAAGTTGCTG AAGAAGCCATTGCTGGTACAAAAACTGCTGTTAATATTAAGTGCATTCCTCCATTTCTCTCTGTTATTTTCAAAATAAAT CACTGATTGAACTCTATTGCTTGATTACCATTGCATCATTTGTTGAATATTTCATTCATGATGTGTGGCATGTGTCTATG AAACAATTCAGCTGCTGTTAAACTAGCAAACTACCCAGTATGTTCCTCCTTTATGAAAATTAAAATTAAACTTGCATCTC AATTCAATAGTATATTAGATTAAGGGGATGTTGGCTATCAGAAATTTCATAATACTTGTTGACTGAGGTAAAATAGATAT CTCTTTGTATGATTCCTGGATATATTTTTTCCCTTCTTTTTCTCTGTCGTCCCTTTTCAGATTGTCTCTAAATTGGGCCA TTTTTATTATCTTAGGCTGGGAAAAGGCGGAAAACGAAGTGGTACTTTTAAAGAAGCAACTTGATTCAGTCACCGTCAGG AATTCAGCTCTTGAAGATCGAGTTACTCATCTAGATGGAGCACTTAAGGAGTGTGTTAGGCAGCTAAGACAGACGAGAGA AGAGCAGGAAGAGAATATCCATGATGCTGTAGCAAGGAAGACTCTTGAATTGGAATCAGCCAAAGCTAAACTTGAGAGCA AGCTCATTGATCTCCAGAGCAAATTAGATGCTGCAAATGCGAGATCTAATTTTGATCTTGATATGAGTCGTAAGGTTGAA AGTTTGGAGAAAGAGAACATGGCTCTCAGGCATGAGATGCTAGCTCAATTAGAAGAGCTGGAAATTAGGACAATTGAGAG GGACTTAAGCACTCAAGCTGCAGAGACAGCAAGCAAGCAACATTTGGAAAGCATCACGAAGGTAGCCAAGCTTGAGGCTG AGTGCTGGAGACTAAAGAGCATGGCTTCCAGAGCATCTGTAGTTATTGATCATAAATCCGCCGTTGGATCTCTCACAGAT AGTCAATCAGACAGTGGGGAGCGGCTTGCTGCAGTGGAGATTGAAACCCGCAAGATGAGTGGCTCAGAACCGAACAAGTC TGAGCCAAGTTGTTCTGACTCATGGGCATCCGCACTAATCGCTGAGCTTGATCAGTTCAAGAACGAAAAGTGCAGAAAAG CTCCATCCAGCTCTGTTAAAATTGACCTAATGGATGATTTTCTTGAAATGGAACGACTTGTTGCATTGCCGCTGGAGACT AAGGATGAAAGCAGTGTCCAGGAGTCTGTTGTTTCCAATCAGCGCATTGACAAAGAAAGCTCTCTCAAGGCTGAGTTTGA GATCATGAGTCAACAAATGGATGAACTAAAAGAGAAGCTAGAGAAGGTGGAAGCAGATAAAGCTGAACTAGAGATAGCTT TGATGAAAAGTGAAGAGTATATTGAGGAGTCACAACTCCAGTTGAGGGAGGCAGAAGAGAAATTGGAGGAGTTGCAAAGC GAGCTAGAAAATGCCTACCAATCAAAGCAGAAGATAGAAAATAACCTGATGAGCATGGACGCAGAGGCTCAGACATTATC TATGAAGGTTGATTTATTAGAAGCGGAGGTCGATCAGGAGAGGGCCGTGTCACATGAAATTGCAATGAAGTGTAAGGACC TGGAGGAAGAGTTAGGAAGAAGATCTGCAAAGCTTGGCTTATTAGAAGCTGAGCTTGATAAGCAAAGGTCCGTGTCTGAT GAAATCACAATGAAGTGTAAGGACCTAGAGGAAGAGCTAGAAGGCAAAACTGCAAAGGTTGACTTATTAGAAGCAGAGAT TGTTAAAGAGAGAGCTGAGTCAGATAAAATTGCAACTAAGTGTAAGAGCCTGGAGGAAAAGCTGGAGAGCAAATCTGCGA AGATAGATTTATTAGAAATAGAGGTTGATAAGGAGAGAGCTATGTCTGAAGAAATTGCAATGAAGTGTAAGGAGTTGGAG GAAGAGATACTCAGGTCAACTAACTCATATGTTGAAAAGAAGATTAAGCAGGTTGGTCATCACTAACATCTATATATTAA ATGTTCTATCATTGATCTAATGTACAAAATAAGAGAAATTAATCATATACTTTCTACCCAATCATGTAATTCATGTGAAT TTTTTTATTCCAGGAGGACCTAGCATTAGCTGCCGGAAAGCTTGCCGAGTGTCAGAAAACAATAGCATCTTTGGGGAATC AGTTAAAATCCTTGGCTACTCTTGAAGATTTCCTCATCGATACAGCAAGCATTCCTGCAACTCCGCCACTCATTGCACAT ACTGACGGAGAGATGTGGAAGTTGCATTCAAATGGCACATTTTCACCCAAAAGAAATTCCAGTTCTTCCAGGATGGCTGA TGGTAGCTCTGGACCGTTGTTAATCAGAAATGAGGAAAGCTCACCACCCTCATCATCATCTTCAACTTCATCAGCACCCT TGCCGAACCATGTCAGCTCTGAGAAGAGTCGGAATGGCTTTGCGAAATTTTTCTCGCGAACCAAGAGTGGGATCCGGCTA GAAATTTAGTCTTAGCTAGAAACGGAAGTATTTTTTTTTCTCGAGTTGTAGAACAGATTGATCTTGTGATTCAAAGAAAA TATATAACAGCATTCAATTGGTGTCAATTATATCATTTTTCAAAATCTTGTGTTGGGTTTATGTGCATGTTTGGTTTCCT ATTGGCTTGCCAAATCCCAGCATCAATTCTGGTAGAGTGAAACAAATATTGGATGAAAACATTGATGTTTGATAATCATT TTGGAGAATTGATTTCAGCCTCGAAATCAATTCTTGATGAAAATAC
CDS sequence (LotjaGi1g1v0159300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGGATAAGAAGAGATGGTTTCGGAAGCGGAAGTCTTCTGAGAAGAGCTCTGGCGATACTGAAAGTTCAGGATCCGT TTCATCTCATTCTGAGAGGTACTCAGATGAACAGGAGGCCTCAAAGGAATCTCCTAACGGAAGCAATCAGTCCCCTGATG TAACCTCAAAAGTCACGGCCTGTGCTGAAGATGTTAATGATATTTCCATTATCAATGCACAATTGCCTGAAGAAATCACC CCAAAACCTGTACCCACTACAGGAATCATAAATCGTTGTTCAGTAGAGGAAGATGAAAATGGAGAAAATAGAAATATGCA AAATGGAAACGAAGGAGACCTAAATGATGGTTCAAGGAATATATCTGAGAGGCTATCTGCTGCACTTGTGAATGCCAATG CCAAAGAAGACTTGGTTAAGCAGCATGCCAAAGTTGCTGAAGAAGCCATTGCTGGCTGGGAAAAGGCGGAAAACGAAGTG GTACTTTTAAAGAAGCAACTTGATTCAGTCACCGTCAGGAATTCAGCTCTTGAAGATCGAGTTACTCATCTAGATGGAGC ACTTAAGGAGTGTGTTAGGCAGCTAAGACAGACGAGAGAAGAGCAGGAAGAGAATATCCATGATGCTGTAGCAAGGAAGA CTCTTGAATTGGAATCAGCCAAAGCTAAACTTGAGAGCAAGCTCATTGATCTCCAGAGCAAATTAGATGCTGCAAATGCG AGATCTAATTTTGATCTTGATATGAGTCGTAAGGTTGAAAGTTTGGAGAAAGAGAACATGGCTCTCAGGCATGAGATGCT AGCTCAATTAGAAGAGCTGGAAATTAGGACAATTGAGAGGGACTTAAGCACTCAAGCTGCAGAGACAGCAAGCAAGCAAC ATTTGGAAAGCATCACGAAGGTAGCCAAGCTTGAGGCTGAGTGCTGGAGACTAAAGAGCATGGCTTCCAGAGCATCTGTA GTTATTGATCATAAATCCGCCGTTGGATCTCTCACAGATAGTCAATCAGACAGTGGGGAGCGGCTTGCTGCAGTGGAGAT TGAAACCCGCAAGATGAGTGGCTCAGAACCGAACAAGTCTGAGCCAAGTTGTTCTGACTCATGGGCATCCGCACTAATCG CTGAGCTTGATCAGTTCAAGAACGAAAAGTGCAGAAAAGCTCCATCCAGCTCTGTTAAAATTGACCTAATGGATGATTTT CTTGAAATGGAACGACTTGTTGCATTGCCGCTGGAGACTAAGGATGAAAGCAGTGTCCAGGAGTCTGTTGTTTCCAATCA GCGCATTGACAAAGAAAGCTCTCTCAAGGCTGAGTTTGAGATCATGAGTCAACAAATGGATGAACTAAAAGAGAAGCTAG AGAAGGTGGAAGCAGATAAAGCTGAACTAGAGATAGCTTTGATGAAAAGTGAAGAGTATATTGAGGAGTCACAACTCCAG TTGAGGGAGGCAGAAGAGAAATTGGAGGAGTTGCAAAGCGAGCTAGAAAATGCCTACCAATCAAAGCAGAAGATAGAAAA TAACCTGATGAGCATGGACGCAGAGGCTCAGACATTATCTATGAAGGTTGATTTATTAGAAGCGGAGGTCGATCAGGAGA GGGCCGTGTCACATGAAATTGCAATGAAGTGTAAGGACCTGGAGGAAGAGTTAGGAAGAAGATCTGCAAAGCTTGGCTTA TTAGAAGCTGAGCTTGATAAGCAAAGGTCCGTGTCTGATGAAATCACAATGAAGTGTAAGGACCTAGAGGAAGAGCTAGA AGGCAAAACTGCAAAGGTTGACTTATTAGAAGCAGAGATTGTTAAAGAGAGAGCTGAGTCAGATAAAATTGCAACTAAGT GTAAGAGCCTGGAGGAAAAGCTGGAGAGCAAATCTGCGAAGATAGATTTATTAGAAATAGAGGTTGATAAGGAGAGAGCT ATGTCTGAAGAAATTGCAATGAAGTGTAAGGAGTTGGAGGAAGAGATACTCAGGTCAACTAACTCATATGTTGAAAAGAA GATTAAGCAGGAGGACCTAGCATTAGCTGCCGGAAAGCTTGCCGAGTGTCAGAAAACAATAGCATCTTTGGGGAATCAGT TAAAATCCTTGGCTACTCTTGAAGATTTCCTCATCGATACAGCAAGCATTCCTGCAACTCCGCCACTCATTGCACATACT GACGGAGAGATGTGGAAGTTGCATTCAAATGGCACATTTTCACCCAAAAGAAATTCCAGTTCTTCCAGGATGGCTGATGG TAGCTCTGGACCGTTGTTAATCAGAAATGAGGAAAGCTCACCACCCTCATCATCATCTTCAACTTCATCAGCACCCTTGC CGAACCATGTCAGCTCTGAGAAGAGTCGGAATGGCTTTGCGAAATTTTTCTCGCGAACCAAGAGTGGGATCCGGCTAGAA ATTTAG
Protein sequence (LotjaGi1g1v0159300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTDKKRWFRKRKSSEKSSGDTESSGSVSSHSERYSDEQEASKESPNGSNQSPDVTSKVTACAEDVNDISIINAQLPEEIT PKPVPTTGIINRCSVEEDENGENRNMQNGNEGDLNDGSRNISERLSAALVNANAKEDLVKQHAKVAEEAIAGWEKAENEV VLLKKQLDSVTVRNSALEDRVTHLDGALKECVRQLRQTREEQEENIHDAVARKTLELESAKAKLESKLIDLQSKLDAANA RSNFDLDMSRKVESLEKENMALRHEMLAQLEELEIRTIERDLSTQAAETASKQHLESITKVAKLEAECWRLKSMASRASV VIDHKSAVGSLTDSQSDSGERLAAVEIETRKMSGSEPNKSEPSCSDSWASALIAELDQFKNEKCRKAPSSSVKIDLMDDF LEMERLVALPLETKDESSVQESVVSNQRIDKESSLKAEFEIMSQQMDELKEKLEKVEADKAELEIALMKSEEYIEESQLQ LREAEEKLEELQSELENAYQSKQKIENNLMSMDAEAQTLSMKVDLLEAEVDQERAVSHEIAMKCKDLEEELGRRSAKLGL LEAELDKQRSVSDEITMKCKDLEEELEGKTAKVDLLEAEIVKERAESDKIATKCKSLEEKLESKSAKIDLLEIEVDKERA MSEEIAMKCKELEEEILRSTNSYVEKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFLIDTASIPATPPLIAHT DGEMWKLHSNGTFSPKRNSSSSRMADGSSGPLLIRNEESSPPSSSSSTSSAPLPNHVSSEKSRNGFAKFFSRTKSGIRLE I
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 18 | 18 | - | – | |
| MobiDBLite | 1 | 60 | 60 | - | – | |
| PANTHER | 3 | 555 | 553 | 0.0 | – | |
| PANTHER | 3 | 555 | 553 | 0.0 | – | |
| MobiDBLite | 41 | 57 | 17 | - | – | |
| MobiDBLite | 97 | 119 | 23 | - | – | |
| MobiDBLite | 105 | 119 | 15 | - | – | |
| Pfam | 135 | 240 | 106 | 2.6E-38 | ||
| Coils | 192 | 212 | 21 | - | – | |
| Coils | 214 | 241 | 28 | - | – | |
| Pfam | 247 | 314 | 68 | 1.1E-17 | ||
| Coils | 252 | 272 | 21 | - | – | |
| Pfam | 352 | 433 | 82 | 6.9E-16 | ||
| Coils | 432 | 529 | 98 | - | – | |
| SUPERFAMILY | 433 | 567 | 135 | 1.73E-6 | – | |
| Coils | 544 | 606 | 63 | - | – | |
| SUPERFAMILY | 557 | 699 | 143 | 8.83E-7 | – | |
| Pfam | 596 | 699 | 104 | 2.2E-12 | ||
| Coils | 614 | 655 | 42 | - | – | |
| PANTHER | 623 | 800 | 178 | 0.0 | – | |
| PANTHER | 623 | 800 | 178 | 0.0 | – | |
| MobiDBLite | 728 | 785 | 58 | - | – | |
| MobiDBLite | 731 | 785 | 55 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0159300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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