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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0165800 |
| Transcript ID | LotjaGi1g1v0165800.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Bifunctional uridylyltransferase/uridylyl-removing enzyme; TAIR: AT1G76990.1 ACT domain repeat 3; Swiss-Prot: sp|O49285|ACR3_ARATH ACT domain-containing protein ACR3; TrEMBL-Plants: tr|K7M745|K7M745_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0165800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:31472816..31477163) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCAAAAGTTTGCTGGCCATATTTTGATCCGGAGTATGAGAACTTCAGCTATAGAATCAACCCTCCAAGGTATACTTT TATATTCCCTTCAAATGCAATTGTTGTTTCCAATTTTCAATTATCTTCAAATTTTATACTCTTTAGGATAAAGCACTGCA GAAAAAAAGATTATGAAATCACAATATAAAGAACTTTAGTGTTTGTATTAACGATCATTAAACATTTTCATATTTTCCCA AGTGATCACAATATACAGATTTTTTAATGTTGGCATTGAGAATATGAGAGGGCGAACCTTAGCGCTATAGTAAGGTTACT GCCACGTGACTTTATGTTCACAGGAAGCTGCTAGGCAACATTAAATACATAAAGTTGGTCCTCTTTGGACCTCGCGCACA GCGTGAGCTTATAGCACCAGACATGTCTTTGTTGCCCTTATTAAGGATCTCTTAACATTTTCAGATTTTCCCAAGTGTTG CCTAAGTGCATTAACATAGTCTTAGAAGTGAAAACGTGAAAATAAAATAAATAAATAAACCATCAAAACATGATCATATG CTTCTTTAATTCTTAGCTAGTCCTTGTTGTTATAAGAAAGATGTCATGATTTCAATCCCTAGTGGAGTCTGAGGTTAAAC ACCTTGTAGAATTGGGTTTACGATGAGAAATTCTAATACCCATAAGAAGTGACTCGTTTATGGTGAACTCTGTTTCCGCT TCGCAGGGTCTCTGTGGACAATGATAGTTGCCATGATTGTACAGTTATCAAGGTATAATTTCTCAAAATAATTAGATATC AACTCTTTTCATGGTCTCGTTGAGTGTGATTTGGCCGTTTAGCATATCTTAGGAAACCTGGATTTTAATTTTTGAAGTTC ATTGAACCTTTAATCTTTTATTTTCTTCTAACTTCATTCAATTTAACTTTATATACGATGAATTAGATTGAGTTGGCCCC CAAATTCTCTGACCAAAAGTCAAAACTTTAGCCAAATTTGATTTGATCAGACGATCATTTTTAATCTACCCAACCCATTA TACCCTTTGCTAGATTTCCTAAGATTAATCTGCATTTGCAGAAACTTATCTTTAGCAATATTTTCCAACTTGAAAGTTCA TAGAGAAAAGAAGTTGCAAATTTGAACTGAAACCTTGTTGAAGAGGTAGAAGTCCTGCTAAAACCTCATTCAGTTAATTT CTAATTAATTTCTTTATCATAGTAAGTTATGCAAAAGGTTATGTTACCCCAAGTAGCCATTATGAGATCATCTTTTTCCA TGGTTCTTGCCGGAATCATTCACAGGGAGATGAGTTGATGCAATGACTAATGCATTCCGTTTTTGCTAAAAAATAATGCA GATTGATAGTGTTAACAAACCTGGAATTCTTCTGGAAGTCGTACAAATCCTGACAGATCTCGACTTCATAATTACCAAAG CTTACGTATCTTCTGATGGTGTATGGTTTATGGATGGTATGTTTGAGATTAAATTCAAACTTGAATCTGTAATCTGTAAT GTGTATTGACAGTTAGCACACAGATATGTCCTGCTCATGCTTGTTATTAGCCTAAACAAATATTGTTAATCATTGAGAAC ATTGCTTACAATCAAGAATTTGAATCTATACATGGAAGAATGCTCTTGGAGTATTTTTAAAAGTGTCTTTGTATCTCTTT ATATTAGAAAGAGGTTAGAATTTGAGAGGTCTAACTCTCTCCCAAAAGCTAGCTTAGTAGTCGGGTTGTTCTACCCTATA TAAAGGCTTATTTGGTCATACTCATATCTCTAGTCAATGTGAGACTTCTCAACACACCCTTTCACCCAGGACCAGACATC TGGAGTGGAATTTGTAGGAATGAACATTTGGAGGTAGCCCATATGTGAGTAGTCTCCGATAAACAAATGTAGGATAAACT CTGATAACATGTTAGAAACTAATTAACAGCATTGGTTTGCACGGTTATATACCATGGTTAACTACTATTCTATGACTGAT TGTAGTTATAGTTAACTAACCAATACAATAGTATGCTAAGCTAACTAACTCTAATCAGCTAAGCTACTATGCTAAAACTG CTATACTTAAATACTTTTGAGACCAAGATGGAAATGTCATTGTTTATTGTACAAAGCACTTGGATAGAAAACCGCACACT TGTAGTTCCTATGGAGATAGTTACTTAAACATTATTGTCTCAGAAATGAATGCGAGATGGCTTTATAGACAAATCCTTTT CTACATTCTCTCTCTTATTCATATGCTGACACACTCCCATGCATAGATGTAACAAAACACTGTTCAAACAAGGAGCTAAT ATGCTTAACTAATGTTATTAACAGTATTTCATGTCACGGATCAGCAAGGAAAAAAGGTAACAGACAGCAAAACTATTGAT GTCATTGAAAAGGTAAACATCTTTCTCCTCTATATGTATGTTTGAAAATTCTTCTAGAATTAATTTTGGAGTCAAAATCA ATTATAGGTCGAAGCTTCTGTGAGGTGCTTCTGAGCATCAGAATTTATTCCCAGAATAGAGAACTAATCGAAACATGCTA TTCTATATATTTATCTCATATAAAGGATATGCCAGCAATCTAACCATCCTAGAAAAGGATTTCAATTATGATTTAACGGA ATGAAATAGTTTAACCTTTTAAAGAGTTCCTTAAATGGAGGGTTTTTTAATAGTAAGCTTTAGCTGTATATTAGAAAAGA AACCATCCATGATTCCAATTCTTATTGTGCAATGTTAGCAATATAGTCTTTTGAATATTCTACTTAACAGACTCTCTTAC TTAACACTCTGTGATTCGCCAATTTTTTAAAGAAGTCTACACACTTGTTAAAAGACAATCAATTTATGACGCAAGTGTAT TGACTTTTTAAATAGAGGCTAATCATATACTGTGTGATCAAAAGAGTTTGTGGTTTACATTTCTTTCTCAAAATTATTTG AAAAGAATTGGTAGTATGAAGTGGGCACCAGATACACACACCATATTTAAAACCAGATTTCACCTATTACTGCAAAAAAA AAATTGTGACAAATGTACATCCCTGGTGTGTTGATGATCTTCCCTGCCATTTCCATAATCACACAGCAGTATTGCACCCT TGCACTGACAGAAGAGTATTACACATGTCAAACACTGATAACTACTTGTGAACATGACAATAGGCTCTAGGACCAAAGGG AAAGAGCACAGAAGGTGTAAAAAGTTGGCCGGGCAAACGGGTTGCCGTGCACTCGGTTGGTGACCATACAGCCGTTGAGC TCATCGGTAGGGACCGCCCAGGTCTCTTGTCTGAGATATCCGCCGTCCTTGCCAGCCTTCAATTTAATGTGATTGCTGCT GAAGTTTGGACTCATAACAGGCGAATAGCTTGTGTCCTTTATGTCAATGATGCTACAAACCAAGCCATTGATGACCAGAA AAAGTTATCTATTATGGAGGAGCAGCTCAACCACATTCTACGCGTATCTGATGAGGAGGAGGATGAAAAAGAGGCCAAGA ACAATTTCTACATGGGCTCCACCCATATGGATAGGAGACTCCATCAAATGTTGTTTGCTGATAGGGACTATGAAAGGGCT AGTGTAACAACAACAACACCGGATGTTGATTGTCCTCTCTCTTTCAGGCCGAAAATCGAAATTGAACGATGCGGGGAAAA AGGTTACTCAGCTGTTAGTGTGAAATGCAAAGATAGGGCCAAGTTGATGTTTGATATCGTTTGCACTCTCACTGACATGC AATATGTTGTTTTCCATGCTACAATCTCGTCTGAAGGGCCTTATGCATCCCAGGTACACATGATTTATCGACTATAATCC ATTCTTTGCTGCTAATTTTCTGGATTGAATCCTATGTCTAAATTTTCTTCAATTTTATTGTCGCACAGTGTTTGAAGATA TAGGGTATAACAGATTACCTTTCTGAAAAATTCACAGAAGGAATTAATTGAGAAAAATTGAATTAGAATGACCAAATTGT GAACTTTAGACTAAAAGTGTTGATGTGATAATTTCAGGAGTACTTCATCCGGCACATGGATGGATGCACACTTGATACTG AAGGGGAGAAAGAAAGGGTCACCAAATGCATTGAAGCTGCTATTCAAAGAAGAGTAAGCGAGGTAATGTGTCAGTATGCT TCTTTAACTCTCTCACATTAAAAGAAGACGTGGATGAACTTGTGGTTCTCAACTCATAGTAAGTCTTTCATGCTCAATCA TAGAACATGATATCTTGAGATGGTTTCCTACATGGTTTTAAATTGCAGTTATGGCCGCAGTTGCGGTTGCATTGTGAACC TTGAAATTGAAGACAAATGCGACCATAA
CDS sequence (LotjaGi1g1v0165800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAAAGTTTGCTGGCCATATTTTGATCCGGAGTATGAGAACTTCAGCTATAGAATCAACCCTCCAAGGGTCTCTGT GGACAATGATAGTTGCCATGATTGTACAGTTATCAAGATTGATAGTGTTAACAAACCTGGAATTCTTCTGGAAGTCGTAC AAATCCTGACAGATCTCGACTTCATAATTACCAAAGCTTACGTATCTTCTGATGGTGTATGGTTTATGGATGTATTTCAT GTCACGGATCAGCAAGGAAAAAAGGTAACAGACAGCAAAACTATTGATGTCATTGAAAAGGCTCTAGGACCAAAGGGAAA GAGCACAGAAGGTGTAAAAAGTTGGCCGGGCAAACGGGTTGCCGTGCACTCGGTTGGTGACCATACAGCCGTTGAGCTCA TCGGTAGGGACCGCCCAGGTCTCTTGTCTGAGATATCCGCCGTCCTTGCCAGCCTTCAATTTAATGTGATTGCTGCTGAA GTTTGGACTCATAACAGGCGAATAGCTTGTGTCCTTTATGTCAATGATGCTACAAACCAAGCCATTGATGACCAGAAAAA GTTATCTATTATGGAGGAGCAGCTCAACCACATTCTACGCGTATCTGATGAGGAGGAGGATGAAAAAGAGGCCAAGAACA ATTTCTACATGGGCTCCACCCATATGGATAGGAGACTCCATCAAATGTTGTTTGCTGATAGGGACTATGAAAGGGCTAGT GTAACAACAACAACACCGGATGTTGATTGTCCTCTCTCTTTCAGGCCGAAAATCGAAATTGAACGATGCGGGGAAAAAGG TTACTCAGCTGTTAGTGTGAAATGCAAAGATAGGGCCAAGTTGATGTTTGATATCGTTTGCACTCTCACTGACATGCAAT ATGTTGTTTTCCATGCTACAATCTCGTCTGAAGGGCCTTATGCATCCCAGGAGTACTTCATCCGGCACATGGATGGATGC ACACTTGATACTGAAGGGGAGAAAGAAAGGGTCACCAAATGCATTGAAGCTGCTATTCAAAGAAGATTATGGCCGCAGTT GCGGTTGCATTGTGAACCTTGA
Protein sequence (LotjaGi1g1v0165800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKVCWPYFDPEYENFSYRINPPRVSVDNDSCHDCTVIKIDSVNKPGILLEVVQILTDLDFIITKAYVSSDGVWFMDVFH VTDQQGKKVTDSKTIDVIEKALGPKGKSTEGVKSWPGKRVAVHSVGDHTAVELIGRDRPGLLSEISAVLASLQFNVIAAE VWTHNRRIACVLYVNDATNQAIDDQKKLSIMEEQLNHILRVSDEEEDEKEAKNNFYMGSTHMDRRLHQMLFADRDYERAS VTTTTPDVDCPLSFRPKIEIERCGEKGYSAVSVKCKDRAKLMFDIVCTLTDMQYVVFHATISSEGPYASQEYFIRHMDGC TLDTEGEKERVTKCIEAAIQRRLWPQLRLHCEP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 343 | 343 | 5.4E-212 | – | |
| PANTHER | 1 | 343 | 343 | 5.4E-212 | ||
| SUPERFAMILY | 32 | 107 | 76 | 2.78E-12 | – | |
| CDD | 35 | 106 | 72 | 4.52395E-38 | – | |
| Pfam | 36 | 85 | 50 | 1.3E-7 | ||
| ProSiteProfiles | 37 | 114 | 78 | 9.736 | ||
| Gene3D | 124 | 208 | 85 | 1.3E-10 | – | |
| SUPERFAMILY | 125 | 201 | 77 | 1.37E-12 | – | |
| Pfam | 130 | 174 | 45 | 1.2E-8 | ||
| ProSiteProfiles | 130 | 209 | 80 | 11.733 | ||
| CDD | 268 | 342 | 75 | 1.68209E-41 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0165800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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