Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0166000 |
| Transcript ID | LotjaGi1g1v0166000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ, putative; TAIR: AT1G77020.1 DNAJ heat shock N-terminal domain-containing protein; Swiss-Prot: sp|Q8GYX8|DNJ10_ARATH Chaperone protein dnaJ 10; TrEMBL-Plants: tr|I1MAC8|I1MAC8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0166000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:31512251..31516490) extracted from Lotus japonicus Gifu genome v1.2.
TGACGCCAAAGCCTCAACCTATAAATAAGTGAGAGCTAGTTCCATTAGTACATTAAGATATATGAAATCACCTTAGCGTC GGCTCTAACGCGAAACCAAACATGCAAAATAGTAAGAGAATATAATTTTTTTTTAATTGATCTTTTAAAATGAATGTGAT GATTATGATTTATGAGAAAGAAAGGAAGTAGTGGTGCCAACTGGGGCAAAACCACAACTGAGAGTGAGGCTTAAAAAACA GTTTCCTCCCGCTAAAAAGCAGTTCCCGTGAAATACAATATTGCAGTTCAGAACTGTAAAGCCTCTTCATCCTCGTGACA CGAGTGACCCACACACCTCTCTCCATTTTCTTCCCCTTTCTCTCTTTCTCTTCTTCTTCACTTCTCTGCGCTTCTTCTGA AACCGCACCACACGATCGACGACAATGGTGAAGGAGAGAGAGTACTACGACATCCTCGCCGTCGCTCCCTCCGCCTCCGA TTACCAAATTCGCAAGGCCTATTATCACAAGGTAAGGTTCTTCTTCAATCGTACATTTACCGATTATTGCAATTGCATCA ATGAACGATGAATCTGATGATGATTGTGCTTATTGCTTGCTGCTTCAGGCAAAGCAAGTTCATCCTGATCGAAACCCAAA CGATCCTCATGCTGCTGAGAAGTTCCAGGTAACTACTCCTCCACTGCAATTTCTCAGGTTTAGACATTTTATCTGTTTAA TTAGTTTTGATCAACGATTGGTAATTAGTACTTGATTATTGTTAATTGGTTAGTTATGTATCTATAATGTAGTTAGTTGT TTGATTGTGATTTTGTAATGTTTGCAGATTTTGGGCGAAGCGTACCAAGTGTTGAGTGATCCGGTGCAGAGGAACGCGTA CGATCAAAATGGGAAGCATTCTGTGTCTAGGTACGCGTGGTGATGATGATGATGATTTGTGGTGTTTTGATCTGGTTTTC TGGACAGAACTTGCTAATTTTGGTTTTTCCTTATTGAACTTCGGTTGTGCTTATAGGTTATCTGAAAAAAAAAATCATAT TAGGCATGACTAGCATAACAATCTAGCATTCAAGAAAGCATTCATGGATAATGGATTATTGAAGATAACACACGAGGGAA CATGAGAGAATTTTCACCTGAGAGGATCCGTGACATTGAATGTTTACTAATGTCAATTTTAGATGTATGTAGTCATCATA GATAGTCATCTCATCCGAGTCAGAATTCTACTTGACTGATAAGTGATTAAAAACACCAGCACCTAACATGGTAGAATGTT AAAAGTTGTTCAAAAGCAAAATATTTGTTATCAAAATGTAAATTCCTCAAATTGAATTAAATTTTACATAAGTAGAGTGA GTTCAATAAAAATGTGATGATTAGTATTACATGCCGTCTTATCATCCTTAAATCGCTATGTTTCATGAAGATGAACATGT TTTCTTAAAGGATTAATGGGTTCCTTGACAGAGAAACTATGCTTGACCCCACGGCAGTTTTTTCCCTGCTCTTTGGAAGT GAATTGTTTGAGGACTATATTGGGCATTTAGCTGTGGCATCTATGGCTTCTTCAGAACTTGCAGATGAAAGTGAGGATCC TGATAAGCTGCAGGAAAAGTTAAAGGCAAGTATGCCTCAGCATTGCAATTCGGTTTACATTATATTTAACTCTGCAATCT GTTTCAGAAATTATCGATTTGAGATGGGATGCGTAACCTTTTTATATATGAAATTTACCTTATGTTTATTGTGTGCTTCA ATATAGGCTGTCCAGAGAGAAAGGGAAGAAAAGCTAGCAAGATTTTTGAAAGATTTTCTTGGTCAATACGTCCGTGGTGA CAAAAAGGGATTCTTCCAGCGCGCTGAGTCAGAAGCAAGACGGCTTTCTCATGGAGGTTAATGAACTTTTAACTTCATTT TTGCGCAACATTTTCCTTGAGACTAATCACATGGTGAATATGCTCATCATTAAATGATGTAAAAATATTGAGTGCCTTAT ACAGAGAAAATGCCCCATGGAAATCCAAAGCTTGACTTAACACTTTTCTGATTCAAATTTAAACAAATGACTTAGATGTT TAACCATCTAAAGTCATTCTTTGTTTTCACACATCCTCTCTTGCAAGACATGAACTGTCATGATTTATGAGACAGTAATG AGTACATAATCATCATACAGATTTTTCTTTATAGCATTTTATTGAAACAAGGATAGTATTGACTAGTTTTTACTGTTTAT GAATGCAGCTTTTGGAGTTGATATGTTACATACTATCGGCTATATATATTCAAGACAGGCAGCCCAAGAACTAGGGAAAA AAGCCATATATCTTGGAGTGCCATTTGTGGCTGAATGGGTTCGCAATAAAGGACATTTCTGGAAATCACAGTTCACAGCT GCTAAAGGTATAAGACAATTCCATTAGGGACCCTTCCTTATTTATGTCAATTTCTTCTAGGAAGTTAGTTATTCTAAACT ATGCCTGATTTGTTGTGCATATATAATTTAGGTGCTTTTCAGTTACTTCAGCTTCAAGAAGACATTCGCAAGCAATTCAA AATGGATAGCAGTGGCCCTGAAAATGATATTGACTCTCATATTCGTCTTCATAAGGATACATTGATGAATTCCTTGTGGA AGTTAAATGTAGTGGATGTAGAAGTTACCCTTGGACACGTGTGTCAAATGGTGAGTTCTTAACTTGTACTTCTGAGCATT CAAAATGCTTTATATTTGTATGTCTATGTAATCTGATATAGAAAGTTGATCAGGAAACAGGTTATTATTATATTCCATGT CGTTATTCAGATACCATGAAGCTATTTGTATGAACAAAATAACTTATCTCCGCATGGTGAAATGAGGATTGTTAGCTGCA AAGAAAATGGATTCCATGCCATTTTCCATATGCCATGAAGCCTAAGCTAATCTAAGACAATAATGACTTTTCGATTGGAC TTCTATTTAATAACTGGATCTTTTGTCACCTAGCAGCAGAATAAAAGAAATGAAAGGCTAGCTTTGATTTATTCATAAAT CTATTTCTGCAGGTACTCATGGAAAATAACGTTAAGAAAGAGGAACTCAAAGTTCGGGCTACTGCTCTTAAAATTCTTGG GAAGATATTTCAGGTGCACATTTTAAGTTACTTATCAGTTATCATCAACTATATATTCTACCTTTCAGCTTTCAAGGAAT AGAGGCTTTCTTTATATTAATCCTTGTTACCTTGCCCCCAGTATATATATATATATATATATATATATATATATATATAT ATATATATATATATATCTGTTTATGATACAAGATAGGCTACAGATTTATCAGATTTAGAGGAAAGTTTGAGTCAATTATG TACCTTGCATTGTAAAACAGTATACAAGTGTCAAACTAAAAACAAGACATTTGAATCTTGATATAAGGCCAAATATTCCA GACCATGAAGGAGTGAAACCAATTATCATAATGTTGCGCTTTTTCATGTAGTAACTGATATAATGTTATTATACTTCCTT CAGGACAAGAATTCGAAAGAAGGAGAAACATTGAAAAAGAAAATGGCTGATGATTCTGATGACGAAGGAAGCAGTTCTGA TTCTTCAGATGATGAATCGCCTAGAGCACTTACCTACCGGACTCCCTTTTTCACTCAGGTTTGTATAGAACTAGAATTGA TCACATGCAGGTGCATACGAGCCTTCAAATTTAAAATGTATAATGAGCCCGTTTCGATACGGGCTTATTGGAATTTATTG AAGCTTATCTACTAGTAAATGTACTACATAAGCTCCAATAAGTGCTCTTTGGTTTGCATCCATTTAAAACTAACATATGC TAACATTTGATGTGGATATTTGTGCTTCTGCAGGGTATCGGTAGGCTCTTCAAATGCCTTTGTAATCCAGCATTTGATGT GGATGATGAAGAGATAGTTTACAAAAGCAAATGATCCATATAAACTTTCTCAGATTTGGAAACAAAATTCAGCCCATGTC AGTATTCTGTTCAACTGTTCGTGAGATTAATATACGTGTGGTTCCCTCTGAATATAGTTTTGGGAAGACAATAATGGTGC AAGCCATAGATATTCATACCTTGTTTGTTGTAATTACACTGCCATCAAGTTACATGTGCCAAAACACTTGGCCAAGAGTC AATCTTACAGTCAATTCTGCAACTCCTTTTTTACCTTCCTTTTCCCTCTCTGCTTTTGGATGTTACAAAATTGGAAATTC
CDS sequence (LotjaGi1g1v0166000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAAGGAGAGAGAGTACTACGACATCCTCGCCGTCGCTCCCTCCGCCTCCGATTACCAAATTCGCAAGGCCTATTA TCACAAGGCAAAGCAAGTTCATCCTGATCGAAACCCAAACGATCCTCATGCTGCTGAGAAGTTCCAGATTTTGGGCGAAG CGTACCAAGTGTTGAGTGATCCGGTGCAGAGGAACGCGTACGATCAAAATGGGAAGCATTCTGTGTCTAGAGAAACTATG CTTGACCCCACGGCAGTTTTTTCCCTGCTCTTTGGAAGTGAATTGTTTGAGGACTATATTGGGCATTTAGCTGTGGCATC TATGGCTTCTTCAGAACTTGCAGATGAAAGTGAGGATCCTGATAAGCTGCAGGAAAAGTTAAAGGCTGTCCAGAGAGAAA GGGAAGAAAAGCTAGCAAGATTTTTGAAAGATTTTCTTGGTCAATACGTCCGTGGTGACAAAAAGGGATTCTTCCAGCGC GCTGAGTCAGAAGCAAGACGGCTTTCTCATGGAGCTTTTGGAGTTGATATGTTACATACTATCGGCTATATATATTCAAG ACAGGCAGCCCAAGAACTAGGGAAAAAAGCCATATATCTTGGAGTGCCATTTGTGGCTGAATGGGTTCGCAATAAAGGAC ATTTCTGGAAATCACAGTTCACAGCTGCTAAAGGTGCTTTTCAGTTACTTCAGCTTCAAGAAGACATTCGCAAGCAATTC AAAATGGATAGCAGTGGCCCTGAAAATGATATTGACTCTCATATTCGTCTTCATAAGGATACATTGATGAATTCCTTGTG GAAGTTAAATGTAGTGGATGTAGAAGTTACCCTTGGACACGTGTGTCAAATGGTACTCATGGAAAATAACGTTAAGAAAG AGGAACTCAAAGTTCGGGCTACTGCTCTTAAAATTCTTGGGAAGATATTTCAGGACAAGAATTCGAAAGAAGGAGAAACA TTGAAAAAGAAAATGGCTGATGATTCTGATGACGAAGGAAGCAGTTCTGATTCTTCAGATGATGAATCGCCTAGAGCACT TACCTACCGGACTCCCTTTTTCACTCAGGGTATCGGTAGGCTCTTCAAATGCCTTTGTAATCCAGCATTTGATGTGGATG ATGAAGAGATAGTTTACAAAAGCAAATGA
Protein sequence (LotjaGi1g1v0166000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVKEREYYDILAVAPSASDYQIRKAYYHKAKQVHPDRNPNDPHAAEKFQILGEAYQVLSDPVQRNAYDQNGKHSVSRETM LDPTAVFSLLFGSELFEDYIGHLAVASMASSELADESEDPDKLQEKLKAVQREREEKLARFLKDFLGQYVRGDKKGFFQR AESEARRLSHGAFGVDMLHTIGYIYSRQAAQELGKKAIYLGVPFVAEWVRNKGHFWKSQFTAAKGAFQLLQLQEDIRKQF KMDSSGPENDIDSHIRLHKDTLMNSLWKLNVVDVEVTLGHVCQMVLMENNVKKEELKVRATALKILGKIFQDKNSKEGET LKKKMADDSDDEGSSSDSSDDESPRALTYRTPFFTQGIGRLFKCLCNPAFDVDDEEIVYKSK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 85 | 85 | 1.8E-26 | ||
| PANTHER | 1 | 377 | 377 | 7.7E-216 | – | |
| PANTHER | 1 | 377 | 377 | 7.7E-216 | – | |
| SUPERFAMILY | 2 | 101 | 100 | 2.22E-27 | ||
| SMART | 5 | 63 | 59 | 7.2E-24 | ||
| CDD | 6 | 60 | 55 | 2.59922E-20 | ||
| ProSiteProfiles | 6 | 71 | 66 | 20.007 | ||
| Pfam | 6 | 68 | 63 | 1.2E-22 | ||
| PRINTS | 8 | 26 | 19 | 1.3E-16 | ||
| PRINTS | 26 | 41 | 16 | 1.3E-16 | ||
| PRINTS | 43 | 63 | 21 | 1.3E-16 | ||
| ProSitePatterns | 48 | 67 | 20 | - | ||
| PRINTS | 63 | 82 | 20 | 1.3E-16 | ||
| Pfam | 131 | 324 | 194 | 7.4E-45 | ||
| MobiDBLite | 320 | 345 | 26 | - | – | |
| Coils | 372 | 382 | 11 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0166000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…