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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0171000 |
| Transcript ID | LotjaGi1g1v0171000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plastid division PDV1-like protein, putative; TAIR: AT5G53280.1 plastid division1; Swiss-Prot: sp|Q9FK13|PDV1_ARATH Plastid division protein PDV1; TrEMBL-Plants: tr|A0A072VQM9|A0A072VQM9_MEDTR Plastid division PDV1-like protein, putative; Found in the gene: LotjaGi1g1v0171000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:32653350..32657422) extracted from Lotus japonicus Gifu genome v1.2.
GACATATCTCTCACTTTTTTTTGAAAGTTAACCATGTCTTAAATTTTGGTTCATTCTTACTATGCGTTTTAGCTAATTTA ATGATTCCTTTCGTGCGTGTGTATGCTTATAGCTTCATTTTGTGGACACTTTCCATGCTTTTCATTCGCTGGCTCAGTTC CGAAGAAGAAAATGAAATGGAAGATGCAGATGGAGGAAGTGGAAGCGATTCTCGAGAAAATCTGGGACCTTCATGACAAG CTCAGCGACGCCATTCACTCCATCTCTAGGTCGCACTTCCTCACCTCCATCAAAACTCTCCAAAATTCTCCTCACAACGG AAACATCACCACCACCACCGCCGCTGACCCCGCCGCCGGTGGTGGTGGTTTCGTCTTCGTCAAGGATTTCCGACCTGTAA ACAACGCCGACGGCGACGGCGATGACGAGTCTGCTGTTCGCGAAGCTAAGAGTCTCAATGCCATTAGGACTGCTCTCGAG AACCTTGAAGACCAGCTCGAGTTCTTCCATGTGAGTTTTTCTTTTTCTTCCTTTTGAGCTTTCCCTTTGTTTTCGTTTCA ATTTGATGAAGCTGGTTGTAGATGAGGGATGATAGTGAAGCTGTTTTGGTTTTTTTTTGGTTTTTTTAGTTTTCAGTTTG CTACACACCTTTCTAGGGTTTGGTAATTTGAATTTTTCTGCGGGAAAACTGTTTCTATAATGTTGAATTGAATGCTTTTG TATTGTTTGCCTTGGATTTGTTAGAATCGGAGGTTAACCTCGGTTTCTGGTTATGGTCATTTTGCTGTTTTTCGCTTTTC ATGGCGCAAAAATTAGACATGGATTCAAATTGTTACACAGGAATTTTTAAAATATAAATTTAATGATGCATTTTCTTTAA ATTGTGTGTTGGTTTTGATTTGGAATTTGCTGTTTCAATATGGTTAATAAAGGGTTTGTGTGGTATTTTAATTGAATGTT GTGGTATTATGGATTGAGGTTTGATGGAATTGGTTGTTACAACTGTTCTGTTTGCTGGTTCTCACATTTTATGGTGCAAA AATTAGACATTGTGAACGAAGTCCTTGGATGTTAATTCTGTTATACTGTGTTTTTCGTTGTCTGTCGGTTCTGATTTGGA TAGTGTTTCTTTATCATACATGTATTGATTTGAGTCAGTTTGGTTGAGTTGTGCAATTACATGACATGAACAGGACACCA AGGGGTGGCATGTTACTTCGTGCTACATAAGGAAAATATGAAGCATGTTAACAATAAAATTTGCTTCCTATGGAAAGCAT TTTTCAAAATGACTTGAACTCACTTCATTTTGTTTTTGAGGAAGGAAAAGGACTTAAAAGACAATTTGTAATTTTAATCT GGAATTTTGTACCTGTAATGATTGTTCCTTCAGTCCTGACCTTTGACATGAAGGGTTGCACCTGTTGTTTGCCTCTTCCC AGTGTCCAACTCTTATCATTAATGTTTTCTGCTGACTTTGATTTGGTCTTTCAATAGACTTCCTTTATATCCTTGTTACT TGCAAAGTTTCCTGTACCAAAGTATTTGGAAAACAATGTAAAATGATATGGTGTGAAAATTCTTTCTGATAACTCAAATG AATTCTTAATAGAATTTTGTCATATGATGGTTTTGATTTTCATATACACATACATTTTATATGACAAATTGATTTTCATA CGCACACCCAATAACAAGATTAACTTTAGTTTTGAATTTAGGAAACTCAAAAACCTCAGAAATATGAAAACTGAATTAGG CTACAAAATGGCTCAAATCAGAAAGAAAAGCAGCTTGTGGCTATAAGGATATTGAGAAAATAAAGAGATAAACAGCCAAA CAGATGGGAATTCAGAATAGAGCCAAAACATGGTAACCCATGTAGAAAGAGAGCCAAACAGTTCTAACTGCAGCCAAAAT ATCTGTATATCCCGTTAAGGAATAAGATCCAAATCGTAGTAGGAGCAGAGTATCTTGCACAGAAAAAAGGCCAAACAGAC AGGGTAAAGTCAAAACAAAGGCAATGTACCTAATGCTCTGATTTATAGTAATAATAGAGGTCAAGTACTGGTGTACAGTG TTTCCGAGGGTTAGCTCAAGTGGTAAGAGCTAGGGAACATAAGGGTTGGGTGGGATGGAGGGTGAAGGGTCCAGGGTTCA AACCCTGAGGAGGGACTAATTTACTAACAACTAACATTTGCCTATAAAAACAAAGTACTGGTGTACAGTTCCAGACTTCC AGCTCAATGTGGATAATAATATTTCAAGGTTAATTTATGAATACCCCAAATATTCTAACGCCCATTAACCCTCATAACAT AACAAACATGACATGACTTGAGCTGCGTGAATAACCCTAGGACTTTCACAGTCAAGTTATTAAAGCCGTCATGCAAAGGT TGAGCCAAATTAAGGAGAAAATAATACAAGGAAATCATTGTTTCATATGGAGGCAGATATGTATAACAGGGACAAGGTTT TCTTCATTCGGAGAACTATGGTTTGGCTTGTTGGCAGAAATTTAATGCATAAAATGAACCAAGAATGTTGGAATATGTTG GAGCCTAGGAGGCACTGTCTTTCCTCTGGAAATTGAGAATTTTTATTAATCTGTCAATTGCATGCTAACAGTTTCTACTT TCTACTCTCATTTTGGTTTAGGGTCATATCTTGTTTGACTTTTTAATTGTCTTTCTGTTCTAAGTCTGATTTTCATTCTG TATGGTTTTGTAGACCATTCAAACACAGCAGCGTGTTGAGAGAGATGCTGCAATTGCACGTTTAGAACAGAGCAGAATTG TTCTTGCAATGACATTGGCAGAACACCGTGGTAAAAAGTATAAAGTCATTGAAGAAGCTCTTGCTTTTGTTGGAGATGTG CATGATGCCAGCTGCCTTGACTCACCCGAAGTTCTTTATGGACAACCAAACTGCTCTTCTGGAAATTTTGTAGAGAAGGG GAAGAGATCTAATATCCTTACAAGTGTTTTTATCTCAAGTTTCAATTTTGTGAGGAAGGCTCTTGGATTGGATCATATGG GTGGAATAGTTGGTAATGCTGCTTTGGTAGCAGTTAGCATGATCGCTTTGCTTCATTTACAACAGGTAAATGAGCATCCA TTTAAGCAAGAAAGTAGAGTTCACAACAGACCTGTGAATAGAACAACTCAATTGGGGAGTTCTTCGTCCAATGCACAGTC CAGTCATTTGGATGTATTGTTGGCTAGAGGTTAGGATTAAGCCTCTTTGTGGTGGATTTAAGAGGGTTATGTTTCCGGCT CTTAAAGTTTTTTTATTTTTTTTAATTCTCCTTTGTGTGCTCTTGGCCTTTTTCTTTTATCTTTGCTTAAACAAGGCCTG AATCCTGGTGTACCGAGGGGAGGGTAGGCTAAAATAGAGGCATAGCTACATTAGTGATACTGGATCCCAGAATCAGTCAA TCTCCAAGGGACTTGGTGTCGCTTGAGATAAGGTTCTTGATCGTCTTCTTGGTTTTTGTTGCCATCTTAAGTTTATACAA GTGGCATAATTGTTGATCTGATGAGGTGCTTTAGATATCGTTTCAGTTTGAGGTATTCCAGTTGAGTTGCAAATGCATGG AGTATTGTACTGAGTTGGAAATTCAAACGTATGTTCCTTCTTCCTGCTTGGAAATGTCATCTGTTGTCGATCCCTGCACT TGTTTTTGCTATCGGCTATAGTTGACGAAGTAAAGAATGCCTTATACCTTCAATGTTCTTGGTTCCTTTTACTTCCCACT TAGTACAATCTCTTGTGTATACTTTTATGTTGCAATGAAGTAGATATTTGGTGTTGCTTTTGTACTTGTGAGCTTTCTTT CCCACTAATTCAAGAAATGGTTCCCTAGTTTTCATATGTGGACCACGTGTTAATGGAGTGCCATTTCTATTTTGATATAA GTAACAGTGAAGAACTTATACCCAAAAAATTAAATTCAGTGGAGATTTTATGGTACCTTCTGGCAATTGCAATTGGACTT TTGATTGAATATTTCAATTTCACTTATCTTTGGTATAAATTACAATTGACATTAAGAGTTCAATTCCTTGGAG
CDS sequence (LotjaGi1g1v0171000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTATAGCTTCATTTTGTGGACACTTTCCATGCTTTTCATTCGCTGGCTCAGTTCCGAAGAAGAAAATGAAATGGAA GATGCAGATGGAGGAAGTGGAAGCGATTCTCGAGAAAATCTGGGACCTTCATGACAAGCTCAGCGACGCCATTCACTCCA TCTCTAGGTCGCACTTCCTCACCTCCATCAAAACTCTCCAAAATTCTCCTCACAACGGAAACATCACCACCACCACCGCC GCTGACCCCGCCGCCGGTGGTGGTGGTTTCGTCTTCGTCAAGGATTTCCGACCTGTAAACAACGCCGACGGCGACGGCGA TGACGAGTCTGCTGTTCGCGAAGCTAAGAGTCTCAATGCCATTAGGACTGCTCTCGAGAACCTTGAAGACCAGCTCGAGT TCTTCCATACCATTCAAACACAGCAGCGTGTTGAGAGAGATGCTGCAATTGCACGTTTAGAACAGAGCAGAATTGTTCTT GCAATGACATTGGCAGAACACCGTGGTAAAAAGTATAAAGTCATTGAAGAAGCTCTTGCTTTTGTTGGAGATGTGCATGA TGCCAGCTGCCTTGACTCACCCGAAGTTCTTTATGGACAACCAAACTGCTCTTCTGGAAATTTTGTAGAGAAGGGGAAGA GATCTAATATCCTTACAAGTGTTTTTATCTCAAGTTTCAATTTTGTGAGGAAGGCTCTTGGATTGGATCATATGGGTGGA ATAGTTGGTAATGCTGCTTTGGTAGCAGTTAGCATGATCGCTTTGCTTCATTTACAACAGGTAAATGAGCATCCATTTAA GCAAGAAAGTAGAGTTCACAACAGACCTGTGAATAGAACAACTCAATTGGGGAGTTCTTCGTCCAATGCACAGTCCAGTC ATTTGGATGTATTGTTGGCTAGAGGTTAG
Protein sequence (LotjaGi1g1v0171000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLIASFCGHFPCFSFAGSVPKKKMKWKMQMEEVEAILEKIWDLHDKLSDAIHSISRSHFLTSIKTLQNSPHNGNITTTTA ADPAAGGGGFVFVKDFRPVNNADGDGDDESAVREAKSLNAIRTALENLEDQLEFFHTIQTQQRVERDAAIARLEQSRIVL AMTLAEHRGKKYKVIEEALAFVGDVHDASCLDSPEVLYGQPNCSSGNFVEKGKRSNILTSVFISSFNFVRKALGLDHMGG IVGNAALVAVSMIALLHLQQVNEHPFKQESRVHNRPVNRTTQLGSSSSNAQSSHLDVLLARG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 1 | 16 | 16 | - | – | |
| Phobius | 2 | 10 | 9 | - | – | |
| Phobius | 11 | 16 | 6 | - | – | |
| Phobius | 17 | 302 | 286 | - | – | |
| PANTHER | 25 | 302 | 278 | 3.0E-121 | – | |
| PANTHER | 25 | 302 | 278 | 3.0E-121 | ||
| Coils | 111 | 131 | 21 | - | – | |
| MobiDBLite | 266 | 302 | 37 | - | – | |
| MobiDBLite | 275 | 295 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Chloroplast fission | The division of a chloroplast within a cell to form two or more separate chloroplast compartments. This division occurs independently of mitosis. |
Expression pattern of LotjaGi1g1v0171000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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