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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0172300 |
| Transcript ID | LotjaGi1g1v0172300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein DnaJ; TAIR: AT5G53150.1 DnaJ heat shock amino-terminal domain protein; Swiss-Prot: sp|A5W9N6|CBPA_PSEP1 Curved DNA-binding protein; TrEMBL-Plants: tr|G7J6T0|G7J6T0_MEDTR DnaJ heat shock amino-terminal domain protein; Found in the gene: LotjaGi1g1v0172300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:32806095..32811341) extracted from Lotus japonicus Gifu genome v1.2.
GGGCAATTAGGATCTTCCCTAGCATTTTGATAGATAGAGAGGTCATTGTACATGGTGGTTGTGTCTTTTCATATTCAAAT TCCAAAACTCCACTCACAGTCACAGTCTCAGGTACTCTCAAATGCTGGTTTTTCACTTCCTTCATCACTTCCCCATTGTT ATCACCTTCAAAAATGCTTCCTTTTTGCTTTTGAATTGCTTGTTAGATTGGGGGTTGCTTCGAAATTTGGGGTTTCAGTT TATGCTGAGTGGAACTGCAGAAATTTTCCATTTTGAATTTCGACCGTTGTTTGTTATTTTGAAAATGCATGTGATTTCCC TGTAGATCCTAGTTTTTCAACGTTGTTCTTTGTTAGCGAGATACATGAGTTTGTCTGAATTCTTTTCTGTAGCTGTCTTT GTTCTGTTTGTGTGGGTCAAGAATTGTGTTTATCAGATGATTTGTGATTGCTATCAAGAATTGAATTCTAGGGTTTTATA TATTTATTGAGATTTCTCTTTTTTTTCCTCTGGTATTGAAAGGACTTGGTGTTGTTAGTTGTTACTTTAGACTTTGATAT TGTCTCCAAAGGAACGGAAAAAATGAAGGTTTGCTGTATTGAGCTGAGTTTTCAAATGGGTTGAAAATATTTTTAAAATG ATTCTAGTTAGTATAATCTTTTGTATATTCATGACATTTTGCGGTTCAGTTCTGTTTTCCCCTTTTATGGTGTGTTTGGT TCAATGGAAGGGAGGGGGTGGGAGAGATTTTGATGGAGGGCAGGGGAAGAGAGGGCTTGATAGGAGAGATTTTTACTGGG GAGGGGAAGAGAGGGCATGATAGGAGAGATTTTGATGGAGGGGACGGGGGAGATTTTGATGGAGGGGACTGGGGAGGGGA AGAGAGGGCATGATAGGGGAGATTTTTATTGTTATCATGTTTGGTTAAGATGAGTGGAGTGCGGGGAAATAACTCATTTC TTGTTTGGTTTATGAGGGGAGAGGAGGGATATTGAAACAAATTTACTTCAGTTGCCCTTAGTTTTAAAAGAGTTAGTGAG CTCTCAGCCTTAGTGATCTCAGAGGGAATAGAATTGTACACATTTGTTATTCGATATGTGAGTGTGAATAGAATCCATAG AAGTATTTCATGGTAATCTATGAATAGAATTTTCTTGAATATTTGGTTTACTAGTTGCTGCATTATGGAAAATCGAATTT AACTGATGGCAATACTTGAAAATGCTGCCAACAGTTGTCATAGTTTCTGTCTTTCTTTTCTAGTGTGGAAAGAAAGAGCT TCTTAATATATGGTATGTTTTTTAAAAACAAAGAACTCTTGTAAACAAGAATCAATTTTTTATAAATTCTGAGATTTGAC ATTTACTAGTTTCATGTTTTGTAAATATGTTAGAATTTTGATGTTAGATATATAATAAGTTTATGCTTCAATCATATAAA TGTTGGTCATATCTGTTTTGCCCCTTTTTTGGAAACATCTGTTCTTATTTGTGTCTAACGTCTCTGAATGTATCGGTTCA TTAAATTTTTTAAAATTTTCCCCTTCTCTTATTTTTTTGACTGTTGGTAGGGATTGACTTGTCCAGATATTTAGAGAAAG AAAATGTAGAACTTACTGTCCATTTACTTTCCCAGACGCTTAATCTAGTTTGTCTTCACATCATTATGATTCCATGATTT TTAATTAAATTTGATTGCTTGTAGTGTTGTCAAATATCCGCCATGGCCGATTCTCATTGGAGAATTCTAGCAAGCCGCCA TGGCCGATAGTCTGTCATAATCTGCCATCCAGCATCTGCCTTTGTCAAATATGTTCTGTTTTTGGCTTTCTGCCATAGTG TCATTCGCCATTAACAATACTCTTGCTTGTATAAGAAATACCGTTGCTGACTAAATTTTTTGAGTGAGAAGTTGAGTAGG GCCTCATTTGTTAAAATAATCTTGTGAAGTATGCTGTATGAACTTTATGTTTCTGGTGTTTGGAAAGCCTTTAGCATTGA CAAGGAATCTCTTATGACAGAAAACATGACTGTAGTTCATGTTGGATACTTGAATTGCTGTTGAATTCTTGAATTGCTTG CACCATTGATTTATCCATTACTAGTTTGCTATATTTGTGACAGAGAACTCTGAAATGCTGGCTTACTTGTAATTGTTTAT TCGCTACCTAAAGAATTTTAGGGGCATCTCTCAATGTTTTTTTGTTCTTCTTTGGGTGTGGCATGATTGAAGGTTCATTA ATTCAAAGTTTTCATGTTTATAGAATCAAGCTCTAATTGTTAAATTCTTTCATGTCTTTTAGCTAGGTGACAGAGCAACA TATTGAGAGTTGAGACAACTGGGAATATATGGATTGCAACAAAGATGAGGCAGCTAGGGCCAAGGAAATAGCTGAGAAGA AATTTTCTCTCAGGGAATATGCTGGTGCAAAAAAGTTTGCTCTCAAGGCTCTAAATTTGTATCCTGCACTGGAGGGTGTT CCCCAGTTTCTGTCAATTCTGAATGTTTATATCTCTGCTGAGAATAAAATAAATGGACAAATGGATTGGTATGGTATACT TGGAGTGGATCCCTTTGCTGATGAGGAGACAATTAGAAAGAAATACAGGGTATTGGCTCTCAGTCTTCACCCTGACAAAA ATAGGTCTTTAGGTGCAGAGGGTGCATTTAAGCTTGTTTCAGAGGCATGGAGCTTACTATCTGATAAGGCCAAGAGACTA GCATACAACAACATCAGGAGTGTGGGTGGACTTCAGCATAATGCTCCCAACCATGTTGGGGCTCAATCAAAAGCACCCAG TTCAAATGGTTCTAATAATCCTAAGAAGAATGCAACCTCAAATGTGGGTGGACCTCAGCATAATGCTCCCAACCATGTTG GGGCTCAATCAAAAGCACCCAGTTCAAGTGGTTCTAATAATCCTAAGAAGAATGCAACCTCAGATGGGAGAACTGGAAAT AATAATGCCCGGGCACCACCTTCACCCTCCATTCCTCGTCCACATAAAATGTCGGGTACCTTTTGGAGTTCCTGTAGTCG TTGCAAGGTACATTTTGAGTATCTCAGGGTTTATTTGGATCAAATTCTCCTATGTCCCAATTGTAAGGAAGCTTTTAAGG CTATAGAGAAGAGTCCGCCTCCTAATGCTGTTAAGTCATCTAATTCGGCTTCTCGGAAACATGATCAGAAGTCTCAACAT CATGCTGGAAAGAATCACCCCATCAATCCGGGAAGAACTTCTGCAGTTTCTCAAGACAAGAAATCCAGCAGTTCTGCAGG CATGTCTTCTTTTAACAATACAAGCTTCCAGCGCGGTCCTCCCTCAAGAATGCCTGGTTTTGTTGGTGCAGATGGATCGT CGTCTGTTACTGCTGCAAGTAAGCAGCATTCAAGCAAGAAAAGAAAATTTGAAGGAGCTGCATCAATTACTTCGCGGGAG AAGAATCACCCCATCAATCTGGGAAGAACTTCTGCAGTTTCTCAAGACAAGAAATCCAGCAGTTCTGCAGGCATGCCTTC TTTTAACAATACAAGCTTCCAGCGTGGTCCTCCCTCAAGAATGCCTGGTTTTCTTGGTGCAGATGGATCGTCGTCTGTTA CTGCTGCAAGTTTTAAGAAGCAATCAGGCGAGAAAAGAAGAAAATTTGAAGGAGCCGCATCAATTGCTGCGCGGGAGAAG AATAACATGTATAAGGCGTCTGATGGTTCTTTTAGTAACGTTGAAACCCCTATGGAGAAAATAAGGATAGATGATATTCA CTTGTACAGGGCAAATCATATGACCATGCGAGATGGAGCAACCAGTTTGGGATCTGGAAAACCTAACATGGGAACAGAAA GGACTTATGGATTTCCAGGTGTAGCTATAAAGCATCACATGAGAGAGTTGTCCCTTTTTGAGACAAGGACCATGTTGATC AATAAAGCACAGTTTGAAATTCGCAAGAAACTTCAAGAATGGAGATCAGCAGCTCAAGCTAAGGCTAGAAAGAATGACAA AGGACATATAAGGCAGAAAAGCACATTTGATGAGAAAACAACTGGCCCAGAGAAGCATGGAGGCTCCAATTTTGATAGTA ATAATTATATGAAATGTGATTCTATTGGTGAAAGTGTAAAGAAGAAGCAAGCATATGTTGCTATCAGTGTTCCAGATCCT GATTTTCACAACTTTGACCTGGATAGATCTGAAAATTCCTTTGAGGAGGACCAGGTTTGGGCTGCTTATGATGATGATGA TGGAATGCCTCGATTTTATGCTAGAATTCACAAGGTGATCTCCGCGAAGCCGTTTAGAATACAGATCAGTTGGCTTAACT CTCGAAGCAACAGTGAATTGGGCCCAATGAACTGGGTAGGTTCTGGTTTTTACAAAACTTGTGGGGATTTCAGGCTTGGC AGGCATGAGATAACTGAATCATTAAATTCATTTTCACACAAGGTAAGGTGGACAAAAGGCAGAGGAGTTTTTCGCATCTT TCCCGGAAAGGGGGAAATCTGGGCACTCTATAAGAACTGGTCTCTTGATTGGAATGAAAACACTCCGGATGAAGTGGTAC ACAAGTATGATATGGTGGAGGTGCTTCAAGATTTCAGTGAGGAGGAAGGTGTTTTAGTTGCTCCACTTGTTAAGGTTAAC GGTTTCAAGACGGTGTTTCGCAGGCACAGCCATGGTCAGGTAAGGAAAATTCCTAAAGTGGAGATGTTCTGCTTCTCTCA TCAGGTTCCGAGTTATTCGCTGACAGGACAAGAATCTCATAATGCTCCGAAGGGCTGTCGAGAGTTGGATCCAGCAGCCA CTCCTTTGGACCTCCTTCAGGCAACAACAGAAGCTGATGAAGCATTGGATAATGTTGGGAAATCGAAGGAAGACAAAATG CCCAGTTCATCTGAAAAATGTGTTTGTTAAGGGTAGTATGCTTCAAAACCTAGTACAGAAGATATATTTTAGATGAGGAT GGTAGACAGAAAAAGGATGATAGATGATACCTAAAGTATAGAAAAGTAATGTGACTGATGATGCAAAATGCAAATAGGCT TAAGACATTAATTTCAAGATTGATGAAGATATACTTTCATAGGTTACTATTGATTTTGTAAGCCTGACCATAGTTTTTTT TGGTGCCATAATTGATTGGGTTCACAGCATTTGGATTTTGCTATATAATTTTGAGACTCGTTATTCATATAGGTATGTAT ACTTGAATGCAATGTGAATGAATTCTCATCTTAACTTTTTATCTTAA
CDS sequence (LotjaGi1g1v0172300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTGCAACAAAGATGAGGCAGCTAGGGCCAAGGAAATAGCTGAGAAGAAATTTTCTCTCAGGGAATATGCTGGTGC AAAAAAGTTTGCTCTCAAGGCTCTAAATTTGTATCCTGCACTGGAGGGTGTTCCCCAGTTTCTGTCAATTCTGAATGTTT ATATCTCTGCTGAGAATAAAATAAATGGACAAATGGATTGGTATGGTATACTTGGAGTGGATCCCTTTGCTGATGAGGAG ACAATTAGAAAGAAATACAGGGTATTGGCTCTCAGTCTTCACCCTGACAAAAATAGGTCTTTAGGTGCAGAGGGTGCATT TAAGCTTGTTTCAGAGGCATGGAGCTTACTATCTGATAAGGCCAAGAGACTAGCATACAACAACATCAGGAGTGTGGGTG GACTTCAGCATAATGCTCCCAACCATGTTGGGGCTCAATCAAAAGCACCCAGTTCAAATGGTTCTAATAATCCTAAGAAG AATGCAACCTCAAATGTGGGTGGACCTCAGCATAATGCTCCCAACCATGTTGGGGCTCAATCAAAAGCACCCAGTTCAAG TGGTTCTAATAATCCTAAGAAGAATGCAACCTCAGATGGGAGAACTGGAAATAATAATGCCCGGGCACCACCTTCACCCT CCATTCCTCGTCCACATAAAATGTCGGGTACCTTTTGGAGTTCCTGTAGTCGTTGCAAGGTACATTTTGAGTATCTCAGG GTTTATTTGGATCAAATTCTCCTATGTCCCAATTGTAAGGAAGCTTTTAAGGCTATAGAGAAGAGTCCGCCTCCTAATGC TGTTAAGTCATCTAATTCGGCTTCTCGGAAACATGATCAGAAGTCTCAACATCATGCTGGAAAGAATCACCCCATCAATC CGGGAAGAACTTCTGCAGTTTCTCAAGACAAGAAATCCAGCAGTTCTGCAGGCATGTCTTCTTTTAACAATACAAGCTTC CAGCGCGGTCCTCCCTCAAGAATGCCTGGTTTTGTTGGTGCAGATGGATCGTCGTCTGTTACTGCTGCAAGTAAGCAGCA TTCAAGCAAGAAAAGAAAATTTGAAGGAGCTGCATCAATTACTTCGCGGGAGAAGAATCACCCCATCAATCTGGGAAGAA CTTCTGCAGTTTCTCAAGACAAGAAATCCAGCAGTTCTGCAGGCATGCCTTCTTTTAACAATACAAGCTTCCAGCGTGGT CCTCCCTCAAGAATGCCTGGTTTTCTTGGTGCAGATGGATCGTCGTCTGTTACTGCTGCAAGTTTTAAGAAGCAATCAGG CGAGAAAAGAAGAAAATTTGAAGGAGCCGCATCAATTGCTGCGCGGGAGAAGAATAACATGTATAAGGCGTCTGATGGTT CTTTTAGTAACGTTGAAACCCCTATGGAGAAAATAAGGATAGATGATATTCACTTGTACAGGGCAAATCATATGACCATG CGAGATGGAGCAACCAGTTTGGGATCTGGAAAACCTAACATGGGAACAGAAAGGACTTATGGATTTCCAGGTGTAGCTAT AAAGCATCACATGAGAGAGTTGTCCCTTTTTGAGACAAGGACCATGTTGATCAATAAAGCACAGTTTGAAATTCGCAAGA AACTTCAAGAATGGAGATCAGCAGCTCAAGCTAAGGCTAGAAAGAATGACAAAGGACATATAAGGCAGAAAAGCACATTT GATGAGAAAACAACTGGCCCAGAGAAGCATGGAGGCTCCAATTTTGATAGTAATAATTATATGAAATGTGATTCTATTGG TGAAAGTGTAAAGAAGAAGCAAGCATATGTTGCTATCAGTGTTCCAGATCCTGATTTTCACAACTTTGACCTGGATAGAT CTGAAAATTCCTTTGAGGAGGACCAGGTTTGGGCTGCTTATGATGATGATGATGGAATGCCTCGATTTTATGCTAGAATT CACAAGGTGATCTCCGCGAAGCCGTTTAGAATACAGATCAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAAT GAACTGGGTAGGTTCTGGTTTTTACAAAACTTGTGGGGATTTCAGGCTTGGCAGGCATGAGATAACTGAATCATTAAATT CATTTTCACACAAGGTAAGGTGGACAAAAGGCAGAGGAGTTTTTCGCATCTTTCCCGGAAAGGGGGAAATCTGGGCACTC TATAAGAACTGGTCTCTTGATTGGAATGAAAACACTCCGGATGAAGTGGTACACAAGTATGATATGGTGGAGGTGCTTCA AGATTTCAGTGAGGAGGAAGGTGTTTTAGTTGCTCCACTTGTTAAGGTTAACGGTTTCAAGACGGTGTTTCGCAGGCACA GCCATGGTCAGGTAAGGAAAATTCCTAAAGTGGAGATGTTCTGCTTCTCTCATCAGGTTCCGAGTTATTCGCTGACAGGA CAAGAATCTCATAATGCTCCGAAGGGCTGTCGAGAGTTGGATCCAGCAGCCACTCCTTTGGACCTCCTTCAGGCAACAAC AGAAGCTGATGAAGCATTGGATAATGTTGGGAAATCGAAGGAAGACAAAATGCCCAGTTCATCTGAAAAATGTGTTTGTT AA
Protein sequence (LotjaGi1g1v0172300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDCNKDEAARAKEIAEKKFSLREYAGAKKFALKALNLYPALEGVPQFLSILNVYISAENKINGQMDWYGILGVDPFADEE TIRKKYRVLALSLHPDKNRSLGAEGAFKLVSEAWSLLSDKAKRLAYNNIRSVGGLQHNAPNHVGAQSKAPSSNGSNNPKK NATSNVGGPQHNAPNHVGAQSKAPSSSGSNNPKKNATSDGRTGNNNARAPPSPSIPRPHKMSGTFWSSCSRCKVHFEYLR VYLDQILLCPNCKEAFKAIEKSPPPNAVKSSNSASRKHDQKSQHHAGKNHPINPGRTSAVSQDKKSSSSAGMSSFNNTSF QRGPPSRMPGFVGADGSSSVTAASKQHSSKKRKFEGAASITSREKNHPINLGRTSAVSQDKKSSSSAGMPSFNNTSFQRG PPSRMPGFLGADGSSSVTAASFKKQSGEKRRKFEGAASIAAREKNNMYKASDGSFSNVETPMEKIRIDDIHLYRANHMTM RDGATSLGSGKPNMGTERTYGFPGVAIKHHMRELSLFETRTMLINKAQFEIRKKLQEWRSAAQAKARKNDKGHIRQKSTF DEKTTGPEKHGGSNFDSNNYMKCDSIGESVKKKQAYVAISVPDPDFHNFDLDRSENSFEEDQVWAAYDDDDGMPRFYARI HKVISAKPFRIQISWLNSRSNSELGPMNWVGSGFYKTCGDFRLGRHEITESLNSFSHKVRWTKGRGVFRIFPGKGEIWAL YKNWSLDWNENTPDEVVHKYDMVEVLQDFSEEEGVLVAPLVKVNGFKTVFRRHSHGQVRKIPKVEMFCFSHQVPSYSLTG QESHNAPKGCRELDPAATPLDLLQATTEADEALDNVGKSKEDKMPSSSEKCVC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 365 | 365 | 4.4E-252 | – | |
| PANTHER | 1 | 365 | 365 | 4.4E-252 | – | |
| Gene3D | 54 | 146 | 93 | 6.1E-20 | ||
| SUPERFAMILY | 63 | 141 | 79 | 3.66E-20 | ||
| SMART | 65 | 122 | 58 | 4.5E-21 | ||
| ProSiteProfiles | 66 | 130 | 65 | 16.691 | ||
| CDD | 66 | 119 | 54 | 2.7409E-19 | ||
| Pfam | 66 | 127 | 62 | 1.1E-18 | ||
| PRINTS | 68 | 86 | 19 | 3.3E-11 | ||
| PRINTS | 86 | 101 | 16 | 3.3E-11 | ||
| PRINTS | 102 | 122 | 21 | 3.3E-11 | ||
| ProSitePatterns | 107 | 126 | 20 | - | ||
| MobiDBLite | 133 | 210 | 78 | - | – | |
| MobiDBLite | 133 | 219 | 87 | - | – | |
| MobiDBLite | 261 | 434 | 174 | - | – | |
| MobiDBLite | 294 | 324 | 31 | - | – | |
| PANTHER | 362 | 835 | 474 | 4.4E-252 | – | |
| PANTHER | 362 | 835 | 474 | 4.4E-252 | – | |
| MobiDBLite | 363 | 401 | 39 | - | – | |
| MobiDBLite | 542 | 578 | 37 | - | – | |
| MobiDBLite | 542 | 569 | 28 | - | – | |
| Pfam | 599 | 802 | 204 | 7.1E-76 | ||
| MobiDBLite | 826 | 853 | 28 | - | – | |
| MobiDBLite | 833 | 847 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0172300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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