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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0180200 |
| Transcript ID | LotjaGi1g1v0180200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Poly [ADP]-ribose] polymerase; TAIR: AT1G23550.1 similar to RCD one 2; Swiss-Prot: sp|Q9ZUD9|SRO2_ARATH Probable inactive poly [ADP]-ribose] polymerase SRO2; TrEMBL-Plants: tr|V7AXP9|V7AXP9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0180200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:34865455..34869568) extracted from Lotus japonicus Gifu genome v1.2.
CCTTTCTCTCTCTCTTTCTTTCTCCCAAATTGCAAACCAACTAGCTGGTGAGTGTTGTCTTGTTCAAAACAAGCAGCGCC ACCCTCTTCACCGCCCATCGCATTCACCTATGGCCCTTGTTTCTGTTCCCAGTTTTCACCCTCCATTTAACCCTCTTCAA CCTTCTTTTCTTCCACACCAAGTTCACAATCTTCATATCTATTACTATAAACACAACAACACATATATCCGTTGGTATAT GACAAATTTCTTGTAGTGACAACGTGACATATTAACCCTCTGCAACCTTCTTTTCTTCCACGCCAAGTTCTCAATCTTCA TCTCTATTATAAACACAACAAACTCACATACTAATTTGTTTTATCAACCCTTCATATTACACACACTTCACTATGAAACC AATAACCTTCCCTCAAAACACGTTCCCTGAGGTGTGGGAACATGATGATGACGACAACTCCGTCGTTTCCGATTGCGAAA GCGTCGTCGTTTCAAGCACCACCAAAACGACGCAGGCTTCCGAGTCGTCGTTTTTAGTTAAACTCGGAGAGACCGACGTC GTGCAAGACCTCATAAAGCGAAGGTTCGTTCGAGGCTTGGGTTTGCTCGGTGCAAAAACTGAGGTCGTTGCGATTCATCG AAACGCGTGCTCCGGCGTCGTTTCGCAAGCGAGGCTTCAGTGCTTCCATGTTCATGCTAAGGCGGTGGCGGAGCTTCGCG GCGGCGAGGCCAATGTGAAGTATGCTTGGTATGGAGCTCGTGGTGGCGAGAATGAGATTCGAGATGTGCTTTCTCATGGT TTTGGTCATAAACATGGTCCTTCACTCTGCCTCTCTCCAGATGATTCTCCTCTTCAAAGGTTTGTTTGCTCACATTGCTT AAATGATCTTAATCATGATTTTTAATAGCTTGTTTGAATCAACTTTTCATTACCTGCAGAATCAATTTTTTTTGAGTGAT TCTGAAATTTTTAGTAGTTTTTCTCTGCGAGTTTGAATTTAAAATCAATTGTAGAATTTTTTTCGAATATTGTTTTGAAA TTTTATACATTTGAGGCAAAAAGCATGATTGGTGAGAAGCTAACTACTGTGAAAAATAAAGTGATTGTGAGACATCCTAT AATCCAAACACTAATTAAAATTCACATTTGAAACTTGAAAGTTTGCACATTTGTGATAGCAACCTGCAATTGTAAGTTGT AACTCGAAATTACTGCTATGTGACCTGAATTTATCTATTATTTCTTTATGTATCTCAAATTGCGGATTGAGACAGCAACT ACAATTTTGAAACCATTGTGGATGGTTGTTTGCAAATTTATACATTTTTTGATTTGGCAAAAAATCAATTGAATGTCTGT GTTAACAAAGTTTCACACAAAGTTTCATTTGACAGTGCTTTAAACCATCCAATTTATAATTGGATATATTTTTTTGTTGA TTGAAAATTTTGAAAATTGATTGTGTTGTTTGTTTTTTGTGCAGTGTGAAAAACTGTGTAGTTGGCAAGGATGGTGTGAG GCACATGTTACTGTGCCGTGTTATTCTAGGGAGATCGGAGCTTGTGCATGATGGCAGTCAGCAATGCTACCCGAGTTCTG AGGAGTATGATTCTGGGGTGGATAGTTTCTCAGCTCCTAACAAGTACATTATTTGGAGTAACCGGATGAACACGCACGTC TTGCCTGCATATGTTATAAGCTTTCGAGTTCCTTCCGTTAAAGGTTTGAATTTTGGAAAGATGTTATATTTCTATGTTTT GAGAGTTCTGTGATGTTGTTCTATCAATTTAAACAAAATTGTTTTATTTTGTAGAGATTGTGAAGACTGAAGAAGAACCT TTAAGACCGTCTTCGCCTTGGATGCCGTTTCCAACTCTGATCTCTGCTCTTTCCAAGGTTTTGCCTCAACCTGATATTGC CCTGTTATCCAGGTTGCACAAAGCTAAACAAGTAAGTGTTTATTACCTGCATATGGGTTTTGAGAGCTAGACTTTTGCTC GTTTTTCGCCTTGTTGATCGCTTTCTCTGTTTCTGACAGGAAAGGAAGATTTCACGGCAAGAACTGATTCAGAAAGTGAG ACAAATAGCAGGAGACAAGTTGCTGACTGCAGTCATCAAGTCTTACAGAGCCAAGGTATACATCTGAACTCTGGGATTTT TATCTCTATCAAGTTTAAGGTTTTATTTGTAAATGTAAGCATTAATGAATGTAAAAGAAAATGACAACAGAAGCACTGGA TATGCAAATTATTGACCCCGTACATTAACATAGCTATAATGAGCTCTAACTAAAAATTTGTTCATTGAGGAACCAATATC ATAAAGCACAACTGCAGTTCTTTCTTATATTCTTGGATCTCTCTAGTCCCTTAATCAATTTTTTATGAGATCCTTCATAT CTGAACATTACATTGTACAAATACTAACCTGAATCAAGGTTTTAATTTGTGCTTGTATGGTCTAAGATTTTGGATAAAGC AGCTAGAGCAATCACAATTGCGGTCAGATTATGGTCTCGTTGACCTCCAAAACTATGATATTGATCACTATCTGACTATG ATTTACAACCTAGATCCTGATTTTTTATACATATTTTCTTTTTTTCTTAAGTAATGGGGTCTATCAGTTTCCAATCATGT TATTGGAAAAAATAAAATAAAAATAGGAGTAAGAGAACTCCTGGAAATAAGTTAGATCCAGGTCCAAGATAGGTGTGAAT GCCCTGCTGGCTGCTATATTCTCCATACTTCTGGATTGTATTGAAACCGAGGTTTTGTTAGAATTAGTTTGAGTCGTTGG AGTTAGACATTATTGTTAAAAGAAGACTATGGGATAAAGAAAGTAGCATTTGACCTGTGGAATTAGTTTTAAACTGGATA ATTGATTTGGTGGTAGTCACATGCCAGTGGTACCTATCTAACTAGTACTTATTCTTATCGGCTTTGAATCTAGAATGAAA AGTGAAATTGAATGAAGTTAAAACCATAGTAGGTTTAAGATTAGATATTGTTGATCATTTTGTCTAGTAATAATTGATAA TAACTGTGTGGAATGTGGCTGTTAAGAAATGCCAACCCATGTTAGTAGGCTAACGGAACAGCAAGAGCAACAATCTCTTG CTTCAAACATTTCTTTTCTTAATTTTTTTTTTCTGGAAACGGACCCTCTACAGTTGATTATCCATTATCCAACTGCACCA TGTGCAGTTCCCAACTATGTATGAAAGGATTTTAGATATGTTTGTTTTTAATTTGTTAAATCATGGAAACAAAATATTCA AAGGTTGGGATCCTTTGCAGTTGAAAAACAGCTTCACAGGATCATGATCCTTCTCAACTGTTTTATTCATGTGTTTCCTT TTGCTTTTCTTTGGGCATTCTGCATTTGGCTACATGTTAGAATTGTCTATTCAATCTAACTTGGTGAATTTGTTTGTCTT TCAGAAAAAACCCTGTAAATTCTCTGCATACAAGGTGAAGGAATGACAACCAGACAGTTAGCACAGGTAGAGTGATTTGC TTCATGAGTTTATAAGTGAAAACAAGAGCGGGTCATTAATGTTATTGACTCAAAGCTCTTGATGTGACATAGCAGAAAGA ATTGCTTTTTCTTTCTGGTTGCTAGTGGGAATGATGTCCTCCAAGAATAAGGAGAGGCTATCATGGAGACATGGATACAT TGAGAGGCTCCAATGTACTACTAACCTTAATGTAAATATCAATTTTGTTGTAATTCTCTTTTTTTTCATGAAAGAGGTCA TTTCTTTTTTGGTCTTGTACAAGTATCTTCATGGCAAACAATATTGTTAGATTTGAAGACCCTTAGGTGCTAGAGTTTGA TTTCATGAATATGGGTTTTTTCGATGCACAAGAGTCAAAACCGAGAAAGATATTTGTTGAAAGAGATATGCACTGTTTTT TGAGCAAGTAATGACATTTTTCAAAGTCAAAAAAATTAGTGGTTTATTTTTTCGTCCCTACTTTAAAAAAAATGGAAATA CTTGTTACGAGAACAATTGAAAACGAAGCCAAATGAAAGAATATAATTGGCCAAATGAAAGAATATGATTAGCGATTTAG ACTTTGCATTCCGTCAAACAATAAATTGTAAGAA
CDS sequence (LotjaGi1g1v0180200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAACCAATAACCTTCCCTCAAAACACGTTCCCTGAGGTGTGGGAACATGATGATGACGACAACTCCGTCGTTTCCGA TTGCGAAAGCGTCGTCGTTTCAAGCACCACCAAAACGACGCAGGCTTCCGAGTCGTCGTTTTTAGTTAAACTCGGAGAGA CCGACGTCGTGCAAGACCTCATAAAGCGAAGGTTCGTTCGAGGCTTGGGTTTGCTCGGTGCAAAAACTGAGGTCGTTGCG ATTCATCGAAACGCGTGCTCCGGCGTCGTTTCGCAAGCGAGGCTTCAGTGCTTCCATGTTCATGCTAAGGCGGTGGCGGA GCTTCGCGGCGGCGAGGCCAATGTGAAGTATGCTTGGTATGGAGCTCGTGGTGGCGAGAATGAGATTCGAGATGTGCTTT CTCATGGTTTTGGTCATAAACATGGTCCTTCACTCTGCCTCTCTCCAGATGATTCTCCTCTTCAAAGTGTGAAAAACTGT GTAGTTGGCAAGGATGGTGTGAGGCACATGTTACTGTGCCGTGTTATTCTAGGGAGATCGGAGCTTGTGCATGATGGCAG TCAGCAATGCTACCCGAGTTCTGAGGAGTATGATTCTGGGGTGGATAGTTTCTCAGCTCCTAACAAGTACATTATTTGGA GTAACCGGATGAACACGCACGTCTTGCCTGCATATGTTATAAGCTTTCGAGTTCCTTCCGTTAAAGAGATTGTGAAGACT GAAGAAGAACCTTTAAGACCGTCTTCGCCTTGGATGCCGTTTCCAACTCTGATCTCTGCTCTTTCCAAGGTTTTGCCTCA ACCTGATATTGCCCTGTTATCCAGGTTGCACAAAGCTAAACAAGAAAGGAAGATTTCACGGCAAGAACTGATTCAGAAAG TGAGACAAATAGCAGGAGACAAGTTGCTGACTGCAGTCATCAAGTCTTACAGAGCCAAGAAAAAACCCTGTAAATTCTCT GCATACAAGGTGAAGGAATGA
Protein sequence (LotjaGi1g1v0180200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKPITFPQNTFPEVWEHDDDDNSVVSDCESVVVSSTTKTTQASESSFLVKLGETDVVQDLIKRRFVRGLGLLGAKTEVVA IHRNACSGVVSQARLQCFHVHAKAVAELRGGEANVKYAWYGARGGENEIRDVLSHGFGHKHGPSLCLSPDDSPLQSVKNC VVGKDGVRHMLLCRVILGRSELVHDGSQQCYPSSEEYDSGVDSFSAPNKYIIWSNRMNTHVLPAYVISFRVPSVKEIVKT EEEPLRPSSPWMPFPTLISALSKVLPQPDIALLSRLHKAKQERKISRQELIQKVRQIAGDKLLTAVIKSYRAKKKPCKFS AYKVKE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 18 | 314 | 297 | 3.1E-118 | – | |
| PANTHER | 18 | 314 | 297 | 3.1E-118 | – | |
| ProSiteProfiles | 34 | 249 | 216 | 23.95 | ||
| Gene3D | 35 | 232 | 198 | 5.1E-20 | – | |
| SUPERFAMILY | 91 | 230 | 140 | 1.06E-13 | – | |
| ProSiteProfiles | 245 | 316 | 72 | 32.841 | – | |
| Pfam | 246 | 311 | 66 | 4.6E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | NAD+ ADP-ribosyltransferase activity | Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor. |
Expression pattern of LotjaGi1g1v0180200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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