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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0180400 |
| Transcript ID | LotjaGi1g1v0180400.2 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Oxysterol-binding protein; TAIR: AT4G08180.1 OSBP(oxysterol binding protein)-related protein 1C; Swiss-Prot: sp|Q8L751|ORP1C_ARATH Oxysterol-binding protein-related protein 1C; TrEMBL-Plants: tr|K7M7F8|K7M7F8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0180400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:35000505..35007135) extracted from Lotus japonicus Gifu genome v1.2.
ATGCATCCTCTCTGCTGCGTCTCCGCCATCACCGACAACTCTTCTCCGGTCAAACCCTCACCGTCCGCCGGTCCCCTCGC CGGCCTCTCCATGCCTCCCTTCCCTTCCGCCGTGAGATCCGAATCGTTTCCCCGTCCCGCCGGCCACGGCCACGTCAGTC ACAGCGTCACCAACGGCGGCGACTGCAGCCGCGCGAGTCAGCAGCAGCAACAGTTGCCATCGACGTCGACTTCAGTGGCG GTGGACGTTAGGATCAACGACCTCGTCGGGAACGGAATCTCGGGGATACTGCATAAGTGGGTGAACTACGGTAAAGGATG GCGGCCACGGTGGTTCGTGCTCCAAGATGGTGTTCTCTCTTACTACAAAATTCACGGACCCGATAAGATCGTCGTCAACC CGGAAACCGAGAAGGGATCCAAGGTCATCGGCGATGAATCCATGCGTATCATCTCTCGCAACCGCAAATCTCACCGTTCC CTTCAACGAAAGCCCTTTGGTGAAATCCATCTCAAGGTTCATCCTCCATTTCCCTTTGATTTTGCTTTGCCGTTAATTTT TTATTGGATTTCATTTCATTTCGGTTTCTATTTCCATCATTAGCTTGTGATTGCTGTTGTTGTTTGCTAGAGGAAAATTT CAGTTATGAAACTAGGAATTCAGAATCCCCTAATTGTGGTTTTAATACATAAATATCTGATTTAGTATATAGAATCTTAC CCAAGAAGGGTAGCTCAGTTGGAAACGCAGGCTGAGTGTGTGGGAATAGCTCTCTGGTTCAATCCCCACACAATACACTA CACTCTGGGGGTGGGATGAGGAGCCTTAATTGTGACTAAATCCTGAATCTAGCGGCATCCAAAGGGTGACCGGGTACAGG ATGTGTATACTAAAAGTATATAGAATCTTTGATGTGGTTGCATGATAATTGATAAGGCTATTGAAATGGGGGATTCTCCT TTGTTGTTTTGCCCTGTTTGTCTTGTTTTTTCATGATATTTGTGTTTGTTATCTCAATGGAAGAAAGCTTTTAATTGTAG GTTTCGACTATCCGCGAGAGTAAATCAGATGACAAGCGCTTTTCCATTTTCACTGGGACGAAGAGACTGCACTTGAGGGC TGAGACTCGTGAGGATCGAGTGGCGTGGATGGAGGCCTTGCAGGCGGTGAAAGATATGTTCCCTCGTATGTCCAACAGTG AGTTGATGGCTCCAGTGGACAATGTGGGCATTTCAACTGAGAAACTGAGGAATCGGCTTCAGCAAGAAGGTTTAAATGAG GCAGCCATTCAGGATAGTGAGCAAATCATGAGAAATGAGTATGCAGCACTGCAAAACCAACTTCTGCTGCTCAAGCAGAA GCAGTTGATCCTAATTGACAATTTACGACAATTGGAGGTACATTTAATGAAAAGTAGCAAACGCCATGCCAATCAAACTG GCTATTCTTGTTGAATTTCTACTGCTGTCCGGAAAGCTGGTCCTTCTTAAAACTCTTTCAAATTCTCAGCAATGAAGGGG GAGGATTCTGTCTTTCTCCTTTTTGTTTAAAAGAAAGTACAGAATTGGGTTTCAACTTGTAGATATGTGAATTGTCAAGT TTTCCCCTAATTTTTGAGTTGCTCTTTTGTATATTTACATCCAAAAGCCAAAAATTAATGGCTTCTTTCTGGAGTATAAT TGATTGAATTGCAACTGCAAGTAATAATATCAGTATTCTTCAGTCAATTTCTTCCCCCTTTACTACCCAACTGGTTTGCA GCGAGCAGTTAGTCCGTATCTTTAATTCAGAATAATTAGATTAGATGTCTTAACTAGTTCTTGGGTGTCATTATCAGTGT TTTTGATGATTTAAATTTAAATATAAAACTAAAAGAATGATGCTCTGGTTAGTAGGTTTATAATATGAAGTCTCAAAACA TCTTTTATTTTCTTACTCCTTGTGATGACTTTTGAATGTATTTATAGAAGAATCCTATCAGAAATTATTCCTTCGACTTA ATATGTATCCGTTCAACTGAATGCTGTTTATCAAATTTTGATATATGTTGAATGATACACTACTGAGATATTTCTGGGTG GTGTTTATTTATCTTGCTGAAAATGTCTTCCACCAGTTAAAGGCCTTGCAATGGAGGATTGGATTGACTAATCATCAAAT ATACTATACCTAATTTTGAGTGTTCTTATGATTTGTTTATCCAGTAGTTTCTGGCGCTTTTGTTTGTTGGCCACAAGCTA GCAAATAATTAGGCAGGTATTATTTGATGATTCATTTTGCACTGAAGTATTTTCTAAATGCCCCTTCCGGAAATACAGCC TTGCTGACCTCCCTTGCCAATTGCTTGGTTAATTTGAAAGTAGAAAAAATGATTTAATATTTCTTGTCAAGCAACAAATG GATTTCACGGTTTTCCTCTTGTTAGTCAAAATGGTTTTCTATCCTTGGAGACTTCTTTGTTTGACCTTTTCTTTTGTGCT TATTTAGTTTTTATTTATTGACTTATTAATCACGGATAACATTTTATTTTCCTTGTGTAGTAATGAACTTTTATTTGTAC TTCATTATTGCAGACAGAGAAGGTTGATCTGGAGAACACTGTTGTTGATGAGAGTCAAAGACAGTTCAATGATGAAGAGG CTTCCTCTATATTAAGGCAGGAAAAATTTAGTGGTAAGTGTTTGAAGTTTGAACAATCACACATTCATATGTTTAAGATC TTTTTATTGCTTGATATGATTTTGGTTATGCATTTTCTTGAAACTAGAAAGATTTAGATGCCAGCTATTATCTTTGATGT CTGATTCCGTATGAACTCTAACCGTTTTCTTGCATTTTTTTGATCCAGAAGCAAGTGCAAGTGAGTCTGAGGATGATAAT GATAGAAATGATGCGGCAGAGGAAGAAACGGACGATGAAGACACTGCCTTTTTTGACACTCGGGATTTTCTGTCGTCATC CAATTCTTTTAAAAGTAATGGATCTGAGTTAAGGGTTTCATCTTTCTCTTCAGATGATGAAGGGCTCTTAGCAGGTGAAT CAGAAGATGATATCGACCCTTCTATTAGATCTGTTGGAACCAACTATCCTCTTGTTAAGCGGCGTAAGAAATTGCCTGAC CCTGTTGAAAAAGAGAAAGGTGTCAGTCTTTGGTCTTTGATTAAAGATAATATTGGGAAAGATCTAACTAAAGTATGCCT TCCTGTTTATTTTAATGAGCCTCTCTCCTCTCTGCAAAAGTGTTGTGAAGAAATGGAGTATTCATATCTCCTGGACCGAG CATATGAATGGGGAAAAAAAGTAAGTAGGGAAATGACATGCGAGTTTTTTACTACCCTGCCATTTTGCGGCATATTCTTT TCTACCTGTATTGTCAATGTCGTACTTTGATTTGATATGAGAAAAGCGTATTACTTTGGTCAGTTTATATTTGTTGATAC ATCTTAGTTATTCAACGCCTTACTGGGTACATTGTTCCAACTTTTAAATTCACTGATGATGTCATGCAGGGTAATAGCCT CATGAGGATTCTCAATGTTGCTGCTTTTGCTGTATCTGCCTATGCTTCAACTGAAGGAAAAATTTGCAAACCGTTTAATC CATTACTAGGGGAGACATATGAAGCTGACTTTCCAGATAAAGGCTTTCGTTTTATCTCAGAAAAGGTCTAAACTAACCCT TCATGTTGATGTCATTAATACCTCATCTTTTCTTTTTGTATACATATATATTGTGATCATATATGTGTTAATCATGTATT ATTTGATACCATAGAACAGAGCATAGAGGAGGTGCGAGCTGCATAATGCTTTTTGTACTAAAATGTTAATGATGAGAGAA GTTTCCCCATTCCAAGGTTAGGGAATGCCACAAGCCTTAATGAATGCTCAGGACCATATTAAGAGATAAACCTATCATTT ATGGACCGCCAGCAAGAATTGAGAATGGTTTGTCTATGAGCATGGGACTGTCATTTGTGGTGGTTATATTACCATATCTG TGTTTATTAGTTGTCGAGAAATTTCGTAGGTATCAGTTATTTGAATTCCTTAGAGCCTCATGCTCCTGGACGAAAAGGAA AAGGTGTTCCTGGTATGAACAAACATTTTGATGGAAAACTCAAGTAGAATTGTGAAACTACCCCACATAAGATGAATGAA AGTTGATGTGATGTGACTGTGTTCTTAAGGCCCACAGAACCTAATGAAACATAATAGAAATTGAACTTTTACTCGACGAG TGATATGCTTATGCCTTTTACGATCTCTGTTTACAATTTCAATAATTATTATTCTGCTTGCTGTCAGGTCAGTCATCATC CTATGATAGTTGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGCGGATAGCAACTTAAAGAGCAAATTCTGGGGC CGATCAATTCAACTTGATCCTATTGGCATTTTGACTTTGGAATTTGATGATGGTGAAGTATTCCAATGGAGTAAGGTATG TTTAACTGCTTCCACTGTTACGTGTTGAATGGCCAAAATTAAAATGCTGTGCACATTTGGTACTAAACTGAAATAGACAT GTTCTTTCAGGTTACTACATCAATATACAATCTCATATTGGGAAAGCTCTATTGCGATCACTATGGTACAATGCGTATAC AGGGAAACCGAGAATACTCATGTAAACTGAAATTCAAAGAACAATCAATAATTGAACGAAATCCTCACCAGGTGCTGGAT TGTTTCTGTTCTACAGATTCTGTCTTTTCAGAGGATTGTTTTGCTATGATATATAACTTATGTGTAATATAGTATTTGAC ATGTGAAACTTTGTTGCAGAGCATACTTTCTTATTGTAGTTTACCTGCTTTTTCAGGTTCAGGGTATTGTTCAGGATAGA AATGGGAAAACATTGTCTACATTAATTGGAAAATGGGATGACAGCATGTACTATATTAATGGAGACCATGGTGGGAAGGG TAAAGGTTATGAATCATCATCAGAAGCCCATCTTCTATGGAAGCGGAGCAAGCCTCCCAAGTTTCCGACTAGATATAACT TCACTCGCTTTGCCATCACATTAAATGAACTTACCCCTGGATTAAAGGTCTCTTCTTTTAACTGATACCTTCTTTTGTGT TGCTGATCTATCTGTTTGTTTTTTTTTTGCTACCTTTTCCATGTCATTTTTAGCAAACATGGATCCTTAAATTGGAAAAA AATATTTACTTGTATCAGCAGGGGAACATTTTAACCATTTATATAATATGGAAGAGCTGAAAAGTAGTACTACCTCCGTT CCAATTTAAATGTTCAGCGAGAGAAGAAACACACATATTAAAGAGTGCAATTAATTTTGTTAATTTTCATAGAAGTATTA GTTGTTTTCCTATTTTACCCTCTAGAATGTGTTTTATCTTCATTTATTGCTCCTAACATGGGCATTATTAGGAAAAACAT CATTTAATGCCCTCTTGAAATGCTAAGTGGACAGATATATAGGAAAATGTTTTTTTATTGAAAGTTGACAGTTAATAAGG AACGGAGGTAGTAGTTTATATGTAACAAGAAAGGGACCAAAGTAGCCACATCATCAAATTCAGCATGTTGTGTGTGTTTG GCATTTGTTTAATATTGATTATCAATTGTATTCTTCACACAGGAAAAGCTGCCACCTACTGATTCCAGGTTAAGACCTGA TCAAAGGTATTTGGAAAATGGGCAGTATGAGATGGCGAATTCAGAAAAATTACGACTAGAGCAGCGACAACGGCAGGTAG ATGTTTCACTTATTTATGCATGTCATTTGTTGATTTCACTCGTAAGGTAGATTGTGTTTGATAGACATGCTATAATGTGA AAAAAACAAGATATGGAATCTATTCCATTTGTTATATTTTAAAAATAAAAGAGTTGTTAAAAAAAAGAACTGTACAATAA AACATGAGATAGAAGAATGACAGATCATGGTTCCAACAAAAAGGGTAGTAGAACCAAAGAAAACAGAAGAAAACCTTCTT GTATCATTTCACCCCATTTTATTTTGATCCCATGCCAAACTTAACCTGATATTCAGTGCATAATATCATGTCAGAATTCC TTAAATCTGACTGTCATCACCATTAGCAAGTATTCTGTGTAGTACAAACATATTTGACAAGTTGTTCCCAATGTGTGGTC TCATCTAACCTCGAGTTGGTTTGGATGAGTTTCCCATGCTTATTCCTTCTGGATCAAGCAATATTGGTTTACATCTTATA AATAAGTAAATTGAGTAGTAAGAGAAAGTTGTTGAAAATATGATTGAAGAGAAAATGTGTGTGAATGCATTAAAATTGCT ATAGGTGTCACACTGAAAGGAAGAAATAGGAGTGTTTATTGTGCTTGTCGATTTCGTGTTATATTGTGTAATTAAACCTT ATTAGTTCATGTTATTGACTTAACATTTTTATGAACTGGATTCAGGCTCGGAAGATGCAAGAGAGCGGTTGGAAACCACA GTGGTTTGCTAGGGATAAAGAAACCGGTAGCTACCGCTTCTTAGGAGGGTATTGGGAGGCCCGAAAAGAAGGAAACTGGA ACTCATGTCCTGACATTTTTGGCCAAATTCCTCCCGATCATCTTTCAGACGAAGGATAATGTACAGTGTAG
CDS sequence (LotjaGi1g1v0180400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATCCTCTCTGCTGCGTCTCCGCCATCACCGACAACTCTTCTCCGGTCAAACCCTCACCGTCCGCCGGTCCCCTCGC CGGCCTCTCCATGCCTCCCTTCCCTTCCGCCGTGAGATCCGAATCGTTTCCCCGTCCCGCCGGCCACGGCCACGTCAGTC ACAGCGTCACCAACGTGGCGGTGGACGTTAGGATCAACGACCTCGTCGGGAACGGAATCTCGGGGATACTGCATAAGTGG GTGAACTACGGTAAAGGATGGCGGCCACGGTGGTTCGTGCTCCAAGATGGTGTTCTCTCTTACTACAAAATTCACGGACC CGATAAGATCGTCGTCAACCCGGAAACCGAGAAGGGATCCAAGGTCATCGGCGATGAATCCATGCGTATCATCTCTCGCA ACCGCAAATCTCACCGTTCCCTTCAACGAAAGCCCTTTGGTGAAATCCATCTCAAGGTTTCGACTATCCGCGAGAGTAAA TCAGATGACAAGCGCTTTTCCATTTTCACTGGGACGAAGAGACTGCACTTGAGGGCTGAGACTCGTGAGGATCGAGTGGC GTGGATGGAGGCCTTGCAGGCGGTGAAAGATATGTTCCCTCGTATGTCCAACAGTGAGTTGATGGCTCCAGTGGACAATG TGGGCATTTCAACTGAGAAACTGAGGAATCGGCTTCAGCAAGAAGGTTTAAATGAGGCAGCCATTCAGGATAGTGAGCAA ATCATGAGAAATGAGTATGCAGCACTGCAAAACCAACTTCTGCTGCTCAAGCAGAAGCAGTTGATCCTAATTGACAATTT ACGACAATTGGAGACAGAGAAGGTTGATCTGGAGAACACTGTTGTTGATGAGAGTCAAAGACAGTTCAATGATGAAGAGG CTTCCTCTATATTAAGGCAGGAAAAATTTAGTGAAGCAAGTGCAAGTGAGTCTGAGGATGATAATGATAGAAATGATGCG GCAGAGGAAGAAACGGACGATGAAGACACTGCCTTTTTTGACACTCGGGATTTTCTGTCGTCATCCAATTCTTTTAAAAG TAATGGATCTGAGTTAAGGGTTTCATCTTTCTCTTCAGATGATGAAGGGCTCTTAGCAGGTGAATCAGAAGATGATATCG ACCCTTCTATTAGATCTGTTGGAACCAACTATCCTCTTGTTAAGCGGCGTAAGAAATTGCCTGACCCTGTTGAAAAAGAG AAAGGTGTCAGTCTTTGGTCTTTGATTAAAGATAATATTGGGAAAGATCTAACTAAAGTATGCCTTCCTGTTTATTTTAA TGAGCCTCTCTCCTCTCTGCAAAAGTGTTGTGAAGAAATGGAGTATTCATATCTCCTGGACCGAGCATATGAATGGGGAA AAAAAGGTAATAGCCTCATGAGGATTCTCAATGTTGCTGCTTTTGCTGTATCTGCCTATGCTTCAACTGAAGGAAAAATT TGCAAACCGTTTAATCCATTACTAGGGGAGACATATGAAGCTGACTTTCCAGATAAAGGCTTTCGTTTTATCTCAGAAAA GGTCAGTCATCATCCTATGATAGTTGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGCGGATAGCAACTTAAAGA GCAAATTCTGGGGCCGATCAATTCAACTTGATCCTATTGGCATTTTGACTTTGGAATTTGATGATGGTGAAGTATTCCAA TGGAGTAAGGTTACTACATCAATATACAATCTCATATTGGGAAAGCTCTATTGCGATCACTATGGTACAATGCGTATACA GGGAAACCGAGAATACTCATGTAAACTGAAATTCAAAGAACAATCAATAATTGAACGAAATCCTCACCAGGTTCAGGGTA TTGTTCAGGATAGAAATGGGAAAACATTGTCTACATTAATTGGAAAATGGGATGACAGCATGTACTATATTAATGGAGAC CATGGTGGGAAGGGTAAAGGTTATGAATCATCATCAGAAGCCCATCTTCTATGGAAGCGGAGCAAGCCTCCCAAGTTTCC GACTAGATATAACTTCACTCGCTTTGCCATCACATTAAATGAACTTACCCCTGGATTAAAGGAAAAGCTGCCACCTACTG ATTCCAGGTTAAGACCTGATCAAAGGTATTTGGAAAATGGGCAGTATGAGATGGCGAATTCAGAAAAATTACGACTAGAG CAGCGACAACGGCAGGCTCGGAAGATGCAAGAGAGCGGTTGGAAACCACAGTGGTTTGCTAGGGATAAAGAAACCGGTAG CTACCGCTTCTTAGGAGGGTATTGGGAGGCCCGAAAAGAAGGAAACTGGAACTCATGTCCTGACATTTTTGGCCAAATTC CTCCCGATCATCTTTCAGACGAAGGATAA
Protein sequence (LotjaGi1g1v0180400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHPLCCVSAITDNSSPVKPSPSAGPLAGLSMPPFPSAVRSESFPRPAGHGHVSHSVTNVAVDVRINDLVGNGISGILHKW VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNPETEKGSKVIGDESMRIISRNRKSHRSLQRKPFGEIHLKVSTIRESK SDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRMSNSELMAPVDNVGISTEKLRNRLQQEGLNEAAIQDSEQ IMRNEYAALQNQLLLLKQKQLILIDNLRQLETEKVDLENTVVDESQRQFNDEEASSILRQEKFSEASASESEDDNDRNDA AEEETDDEDTAFFDTRDFLSSSNSFKSNGSELRVSSFSSDDEGLLAGESEDDIDPSIRSVGTNYPLVKRRKKLPDPVEKE KGVSLWSLIKDNIGKDLTKVCLPVYFNEPLSSLQKCCEEMEYSYLLDRAYEWGKKGNSLMRILNVAAFAVSAYASTEGKI CKPFNPLLGETYEADFPDKGFRFISEKVSHHPMIVACHCEGTGWKFWADSNLKSKFWGRSIQLDPIGILTLEFDDGEVFQ WSKVTTSIYNLILGKLYCDHYGTMRIQGNREYSCKLKFKEQSIIERNPHQVQGIVQDRNGKTLSTLIGKWDDSMYYINGD HGGKGKGYESSSEAHLLWKRSKPPKFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGQYEMANSEKLRLE QRQRQARKMQESGWKPQWFARDKETGSYRFLGGYWEARKEGNWNSCPDIFGQIPPDHLSDEG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 776 | 776 | 0.0 | ||
| PANTHER | 1 | 776 | 776 | 0.0 | – | |
| ProSiteProfiles | 70 | 197 | 128 | 13.687 | ||
| SMART | 71 | 199 | 129 | 1.4E-19 | ||
| CDD | 73 | 204 | 132 | 2.95848E-59 | – | |
| SUPERFAMILY | 73 | 203 | 131 | 1.9E-21 | – | |
| Pfam | 78 | 194 | 117 | 3.2E-18 | – | |
| Coils | 239 | 259 | 21 | - | – | |
| Coils | 267 | 287 | 21 | - | – | |
| MobiDBLite | 286 | 314 | 29 | - | – | |
| MobiDBLite | 286 | 333 | 48 | - | – | |
| MobiDBLite | 315 | 331 | 17 | - | – | |
| SUPERFAMILY | 399 | 777 | 379 | 2.35E-120 | ||
| Pfam | 404 | 756 | 353 | 7.1E-127 | ||
| Gene3D | 490 | 657 | 168 | 9.5E-26 | – | |
| Coils | 709 | 729 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0180400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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