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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0180400 |
| Transcript ID | LotjaGi1g1v0180400.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Oxysterol-binding protein; TAIR: AT4G08180.1 OSBP(oxysterol binding protein)-related protein 1C; Swiss-Prot: sp|Q8L751|ORP1C_ARATH Oxysterol-binding protein-related protein 1C; TrEMBL-Plants: tr|K7M7F8|K7M7F8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0180400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:35000505..35007183) extracted from Lotus japonicus Gifu genome v1.2.
ATGCATCCTCTCTGCTGCGTCTCCGCCATCACCGACAACTCTTCTCCGGTCAAACCCTCACCGTCCGCCGGTCCCCTCGC CGGCCTCTCCATGCCTCCCTTCCCTTCCGCCGTGAGATCCGAATCGTTTCCCCGTCCCGCCGGCCACGGCCACGTCAGTC ACAGCGTCACCAACGGCGGCGACTGCAGCCGCGCGAGTCAGCAGCAGCAACAGTTGCCATCGACGTCGACTTCAGTGGCG GTGGACGTTAGGATCAACGACCTCGTCGGGAACGGAATCTCGGGGATACTGCATAAGTGGGTGAACTACGGTAAAGGATG GCGGCCACGGTGGTTCGTGCTCCAAGATGGTGTTCTCTCTTACTACAAAATTCACGGACCCGATAAGATCGTCGTCAACC CGGAAACCGAGAAGGGATCCAAGGTCATCGGCGATGAATCCATGCGTATCATCTCTCGCAACCGCAAATCTCACCGTTCC CTTCAACGAAAGCCCTTTGGTGAAATCCATCTCAAGGTTCATCCTCCATTTCCCTTTGATTTTGCTTTGCCGTTAATTTT TTATTGGATTTCATTTCATTTCGGTTTCTATTTCCATCATTAGCTTGTGATTGCTGTTGTTGTTTGCTAGAGGAAAATTT CAGTTATGAAACTAGGAATTCAGAATCCCCTAATTGTGGTTTTAATACATAAATATCTGATTTAGTATATAGAATCTTAC CCAAGAAGGGTAGCTCAGTTGGAAACGCAGGCTGAGTGTGTGGGAATAGCTCTCTGGTTCAATCCCCACACAATACACTA CACTCTGGGGGTGGGATGAGGAGCCTTAATTGTGACTAAATCCTGAATCTAGCGGCATCCAAAGGGTGACCGGGTACAGG ATGTGTATACTAAAAGTATATAGAATCTTTGATGTGGTTGCATGATAATTGATAAGGCTATTGAAATGGGGGATTCTCCT TTGTTGTTTTGCCCTGTTTGTCTTGTTTTTTCATGATATTTGTGTTTGTTATCTCAATGGAAGAAAGCTTTTAATTGTAG GTTTCGACTATCCGCGAGAGTAAATCAGATGACAAGCGCTTTTCCATTTTCACTGGGACGAAGAGACTGCACTTGAGGGC TGAGACTCGTGAGGATCGAGTGGCGTGGATGGAGGCCTTGCAGGCGGTGAAAGATATGTTCCCTCGTATGTCCAACAGTG AGTTGATGGCTCCAGTGGACAATGTGGGCATTTCAACTGAGAAACTGAGGAATCGGCTTCAGCAAGAAGGTTTAAATGAG GCAGCCATTCAGGATAGTGAGCAAATCATGAGAAATGAGTATGCAGCACTGCAAAACCAACTTCTGCTGCTCAAGCAGAA GCAGTTGATCCTAATTGACAATTTACGACAATTGGAGGTACATTTAATGAAAAGTAGCAAACGCCATGCCAATCAAACTG GCTATTCTTGTTGAATTTCTACTGCTGTCCGGAAAGCTGGTCCTTCTTAAAACTCTTTCAAATTCTCAGCAATGAAGGGG GAGGATTCTGTCTTTCTCCTTTTTGTTTAAAAGAAAGTACAGAATTGGGTTTCAACTTGTAGATATGTGAATTGTCAAGT TTTCCCCTAATTTTTGAGTTGCTCTTTTGTATATTTACATCCAAAAGCCAAAAATTAATGGCTTCTTTCTGGAGTATAAT TGATTGAATTGCAACTGCAAGTAATAATATCAGTATTCTTCAGTCAATTTCTTCCCCCTTTACTACCCAACTGGTTTGCA GCGAGCAGTTAGTCCGTATCTTTAATTCAGAATAATTAGATTAGATGTCTTAACTAGTTCTTGGGTGTCATTATCAGTGT TTTTGATGATTTAAATTTAAATATAAAACTAAAAGAATGATGCTCTGGTTAGTAGGTTTATAATATGAAGTCTCAAAACA TCTTTTATTTTCTTACTCCTTGTGATGACTTTTGAATGTATTTATAGAAGAATCCTATCAGAAATTATTCCTTCGACTTA ATATGTATCCGTTCAACTGAATGCTGTTTATCAAATTTTGATATATGTTGAATGATACACTACTGAGATATTTCTGGGTG GTGTTTATTTATCTTGCTGAAAATGTCTTCCACCAGTTAAAGGCCTTGCAATGGAGGATTGGATTGACTAATCATCAAAT ATACTATACCTAATTTTGAGTGTTCTTATGATTTGTTTATCCAGTAGTTTCTGGCGCTTTTGTTTGTTGGCCACAAGCTA GCAAATAATTAGGCAGGTATTATTTGATGATTCATTTTGCACTGAAGTATTTTCTAAATGCCCCTTCCGGAAATACAGCC TTGCTGACCTCCCTTGCCAATTGCTTGGTTAATTTGAAAGTAGAAAAAATGATTTAATATTTCTTGTCAAGCAACAAATG GATTTCACGGTTTTCCTCTTGTTAGTCAAAATGGTTTTCTATCCTTGGAGACTTCTTTGTTTGACCTTTTCTTTTGTGCT TATTTAGTTTTTATTTATTGACTTATTAATCACGGATAACATTTTATTTTCCTTGTGTAGTAATGAACTTTTATTTGTAC TTCATTATTGCAGACAGAGAAGGTTGATCTGGAGAACACTGTTGTTGATGAGAGTCAAAGACAGTTCAATGATGAAGAGG CTTCCTCTATATTAAGGCAGGAAAAATTTAGTGGTAAGTGTTTGAAGTTTGAACAATCACACATTCATATGTTTAAGATC TTTTTATTGCTTGATATGATTTTGGTTATGCATTTTCTTGAAACTAGAAAGATTTAGATGCCAGCTATTATCTTTGATGT CTGATTCCGTATGAACTCTAACCGTTTTCTTGCATTTTTTTGATCCAGAAGCAAGTGCAAGTGAGTCTGAGGATGATAAT GATAGAAATGATGCGGCAGAGGAAGAAACGGACGATGAAGACACTGCCTTTTTTGACACTCGGGATTTTCTGTCGTCATC CAATTCTTTTAAAAGTAATGGATCTGAGTTAAGGGTTTCATCTTTCTCTTCAGATGATGAAGGGCTCTTAGCAGGTGAAT CAGAAGATGATATCGACCCTTCTATTAGATCTGTTGGAACCAACTATCCTCTTGTTAAGCGGCGTAAGAAATTGCCTGAC CCTGTTGAAAAAGAGAAAGGTGTCAGTCTTTGGTCTTTGATTAAAGATAATATTGGGAAAGATCTAACTAAAGTATGCCT TCCTGTTTATTTTAATGAGCCTCTCTCCTCTCTGCAAAAGTGTTGTGAAGAAATGGAGTATTCATATCTCCTGGACCGAG CATATGAATGGGGAAAAAAAGTAAGTAGGGAAATGACATGCGAGTTTTTTACTACCCTGCCATTTTGCGGCATATTCTTT TCTACCTGTATTGTCAATGTCGTACTTTGATTTGATATGAGAAAAGCGTATTACTTTGGTCAGTTTATATTTGTTGATAC ATCTTAGTTATTCAACGCCTTACTGGGTACATTGTTCCAACTTTTAAATTCACTGATGATGTCATGCAGGGTAATAGCCT CATGAGGATTCTCAATGTTGCTGCTTTTGCTGTATCTGCCTATGCTTCAACTGAAGGAAAAATTTGCAAACCGTTTAATC CATTACTAGGGGAGACATATGAAGCTGACTTTCCAGATAAAGGCTTTCGTTTTATCTCAGAAAAGGTCTAAACTAACCCT TCATGTTGATGTCATTAATACCTCATCTTTTCTTTTTGTATACATATATATTGTGATCATATATGTGTTAATCATGTATT ATTTGATACCATAGAACAGAGCATAGAGGAGGTGCGAGCTGCATAATGCTTTTTGTACTAAAATGTTAATGATGAGAGAA GTTTCCCCATTCCAAGGTTAGGGAATGCCACAAGCCTTAATGAATGCTCAGGACCATATTAAGAGATAAACCTATCATTT ATGGACCGCCAGCAAGAATTGAGAATGGTTTGTCTATGAGCATGGGACTGTCATTTGTGGTGGTTATATTACCATATCTG TGTTTATTAGTTGTCGAGAAATTTCGTAGGTATCAGTTATTTGAATTCCTTAGAGCCTCATGCTCCTGGACGAAAAGGAA AAGGTGTTCCTGGTATGAACAAACATTTTGATGGAAAACTCAAGTAGAATTGTGAAACTACCCCACATAAGATGAATGAA AGTTGATGTGATGTGACTGTGTTCTTAAGGCCCACAGAACCTAATGAAACATAATAGAAATTGAACTTTTACTCGACGAG TGATATGCTTATGCCTTTTACGATCTCTGTTTACAATTTCAATAATTATTATTCTGCTTGCTGTCAGGTCAGTCATCATC CTATGATAGTTGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGCGGATAGCAACTTAAAGAGCAAATTCTGGGGC CGATCAATTCAACTTGATCCTATTGGCATTTTGACTTTGGAATTTGATGATGGTGAAGTATTCCAATGGAGTAAGGTATG TTTAACTGCTTCCACTGTTACGTGTTGAATGGCCAAAATTAAAATGCTGTGCACATTTGGTACTAAACTGAAATAGACAT GTTCTTTCAGGTTACTACATCAATATACAATCTCATATTGGGAAAGCTCTATTGCGATCACTATGGTACAATGCGTATAC AGGGAAACCGAGAATACTCATGTAAACTGAAATTCAAAGAACAATCAATAATTGAACGAAATCCTCACCAGGTGCTGGAT TGTTTCTGTTCTACAGATTCTGTCTTTTCAGAGGATTGTTTTGCTATGATATATAACTTATGTGTAATATAGTATTTGAC ATGTGAAACTTTGTTGCAGAGCATACTTTCTTATTGTAGTTTACCTGCTTTTTCAGGTTCAGGGTATTGTTCAGGATAGA AATGGGAAAACATTGTCTACATTAATTGGAAAATGGGATGACAGCATGTACTATATTAATGGAGACCATGGTGGGAAGGG TAAAGGTTATGAATCATCATCAGAAGCCCATCTTCTATGGAAGCGGAGCAAGCCTCCCAAGTTTCCGACTAGATATAACT TCACTCGCTTTGCCATCACATTAAATGAACTTACCCCTGGATTAAAGGTCTCTTCTTTTAACTGATACCTTCTTTTGTGT TGCTGATCTATCTGTTTGTTTTTTTTTTGCTACCTTTTCCATGTCATTTTTAGCAAACATGGATCCTTAAATTGGAAAAA AATATTTACTTGTATCAGCAGGGGAACATTTTAACCATTTATATAATATGGAAGAGCTGAAAAGTAGTACTACCTCCGTT CCAATTTAAATGTTCAGCGAGAGAAGAAACACACATATTAAAGAGTGCAATTAATTTTGTTAATTTTCATAGAAGTATTA GTTGTTTTCCTATTTTACCCTCTAGAATGTGTTTTATCTTCATTTATTGCTCCTAACATGGGCATTATTAGGAAAAACAT CATTTAATGCCCTCTTGAAATGCTAAGTGGACAGATATATAGGAAAATGTTTTTTTATTGAAAGTTGACAGTTAATAAGG AACGGAGGTAGTAGTTTATATGTAACAAGAAAGGGACCAAAGTAGCCACATCATCAAATTCAGCATGTTGTGTGTGTTTG GCATTTGTTTAATATTGATTATCAATTGTATTCTTCACACAGGAAAAGCTGCCACCTACTGATTCCAGGTTAAGACCTGA TCAAAGGTATTTGGAAAATGGGCAGTATGAGATGGCGAATTCAGAAAAATTACGACTAGAGCAGCGACAACGGCAGGTAG ATGTTTCACTTATTTATGCATGTCATTTGTTGATTTCACTCGTAAGGTAGATTGTGTTTGATAGACATGCTATAATGTGA AAAAAACAAGATATGGAATCTATTCCATTTGTTATATTTTAAAAATAAAAGAGTTGTTAAAAAAAAGAACTGTACAATAA AACATGAGATAGAAGAATGACAGATCATGGTTCCAACAAAAAGGGTAGTAGAACCAAAGAAAACAGAAGAAAACCTTCTT GTATCATTTCACCCCATTTTATTTTGATCCCATGCCAAACTTAACCTGATATTCAGTGCATAATATCATGTCAGAATTCC TTAAATCTGACTGTCATCACCATTAGCAAGTATTCTGTGTAGTACAAACATATTTGACAAGTTGTTCCCAATGTGTGGTC TCATCTAACCTCGAGTTGGTTTGGATGAGTTTCCCATGCTTATTCCTTCTGGATCAAGCAATATTGGTTTACATCTTATA AATAAGTAAATTGAGTAGTAAGAGAAAGTTGTTGAAAATATGATTGAAGAGAAAATGTGTGTGAATGCATTAAAATTGCT ATAGGTGTCACACTGAAAGGAAGAAATAGGAGTGTTTATTGTGCTTGTCGATTTCGTGTTATATTGTGTAATTAAACCTT ATTAGTTCATGTTATTGACTTAACATTTTTATGAACTGGATTCAGGCTCGGAAGATGCAAGAGAGCGGTTGGAAACCACA GTGGTTTGCTAGGGATAAAGAAACCGGTAGCTACCGCTTCTTAGGAGGGTATTGGGAGGCCCGAAAAGAAGGAAACTGGA ACTCATGTCCTGACATTTTTGGCCAAATTCCTCCCGATCATCTTTCAGACGAAGGATAATGTACAGTGTAGCTTGTTATT TTTTTCCTCCAATTATTTTTACTGATGGGTGTCAGATGA
CDS sequence (LotjaGi1g1v0180400.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATCCTCTCTGCTGCGTCTCCGCCATCACCGACAACTCTTCTCCGGTCAAACCCTCACCGTCCGCCGGTCCCCTCGC CGGCCTCTCCATGCCTCCCTTCCCTTCCGCCGTGAGATCCGAATCGTTTCCCCGTCCCGCCGGCCACGGCCACGTCAGTC ACAGCGTCACCAACGGCGGCGACTGCAGCCGCGCGAGTCAGCAGCAGCAACAGTTGCCATCGACGTCGACTTCAGTGGCG GTGGACGTTAGGATCAACGACCTCGTCGGGAACGGAATCTCGGGGATACTGCATAAGTGGGTGAACTACGGTAAAGGATG GCGGCCACGGTGGTTCGTGCTCCAAGATGGTGTTCTCTCTTACTACAAAATTCACGGACCCGATAAGATCGTCGTCAACC CGGAAACCGAGAAGGGATCCAAGGTCATCGGCGATGAATCCATGCGTATCATCTCTCGCAACCGCAAATCTCACCGTTCC CTTCAACGAAAGCCCTTTGGTGAAATCCATCTCAAGGTTTCGACTATCCGCGAGAGTAAATCAGATGACAAGCGCTTTTC CATTTTCACTGGGACGAAGAGACTGCACTTGAGGGCTGAGACTCGTGAGGATCGAGTGGCGTGGATGGAGGCCTTGCAGG CGGTGAAAGATATGTTCCCTCGTATGTCCAACAGTGAGTTGATGGCTCCAGTGGACAATGTGGGCATTTCAACTGAGAAA CTGAGGAATCGGCTTCAGCAAGAAGGTTTAAATGAGGCAGCCATTCAGGATAGTGAGCAAATCATGAGAAATGAGTATGC AGCACTGCAAAACCAACTTCTGCTGCTCAAGCAGAAGCAGTTGATCCTAATTGACAATTTACGACAATTGGAGACAGAGA AGGTTGATCTGGAGAACACTGTTGTTGATGAGAGTCAAAGACAGTTCAATGATGAAGAGGCTTCCTCTATATTAAGGCAG GAAAAATTTAGTGAAGCAAGTGCAAGTGAGTCTGAGGATGATAATGATAGAAATGATGCGGCAGAGGAAGAAACGGACGA TGAAGACACTGCCTTTTTTGACACTCGGGATTTTCTGTCGTCATCCAATTCTTTTAAAAGTAATGGATCTGAGTTAAGGG TTTCATCTTTCTCTTCAGATGATGAAGGGCTCTTAGCAGGTGAATCAGAAGATGATATCGACCCTTCTATTAGATCTGTT GGAACCAACTATCCTCTTGTTAAGCGGCGTAAGAAATTGCCTGACCCTGTTGAAAAAGAGAAAGGTGTCAGTCTTTGGTC TTTGATTAAAGATAATATTGGGAAAGATCTAACTAAAGTATGCCTTCCTGTTTATTTTAATGAGCCTCTCTCCTCTCTGC AAAAGTGTTGTGAAGAAATGGAGTATTCATATCTCCTGGACCGAGCATATGAATGGGGAAAAAAAGGTAATAGCCTCATG AGGATTCTCAATGTTGCTGCTTTTGCTGTATCTGCCTATGCTTCAACTGAAGGAAAAATTTGCAAACCGTTTAATCCATT ACTAGGGGAGACATATGAAGCTGACTTTCCAGATAAAGGCTTTCGTTTTATCTCAGAAAAGGTCAGTCATCATCCTATGA TAGTTGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGCGGATAGCAACTTAAAGAGCAAATTCTGGGGCCGATCA ATTCAACTTGATCCTATTGGCATTTTGACTTTGGAATTTGATGATGGTGAAGTATTCCAATGGAGTAAGGTTACTACATC AATATACAATCTCATATTGGGAAAGCTCTATTGCGATCACTATGGTACAATGCGTATACAGGGAAACCGAGAATACTCAT GTAAACTGAAATTCAAAGAACAATCAATAATTGAACGAAATCCTCACCAGGTTCAGGGTATTGTTCAGGATAGAAATGGG AAAACATTGTCTACATTAATTGGAAAATGGGATGACAGCATGTACTATATTAATGGAGACCATGGTGGGAAGGGTAAAGG TTATGAATCATCATCAGAAGCCCATCTTCTATGGAAGCGGAGCAAGCCTCCCAAGTTTCCGACTAGATATAACTTCACTC GCTTTGCCATCACATTAAATGAACTTACCCCTGGATTAAAGGAAAAGCTGCCACCTACTGATTCCAGGTTAAGACCTGAT CAAAGGTATTTGGAAAATGGGCAGTATGAGATGGCGAATTCAGAAAAATTACGACTAGAGCAGCGACAACGGCAGGCTCG GAAGATGCAAGAGAGCGGTTGGAAACCACAGTGGTTTGCTAGGGATAAAGAAACCGGTAGCTACCGCTTCTTAGGAGGGT ATTGGGAGGCCCGAAAAGAAGGAAACTGGAACTCATGTCCTGACATTTTTGGCCAAATTCCTCCCGATCATCTTTCAGAC GAAGGATAA
Protein sequence (LotjaGi1g1v0180400.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHPLCCVSAITDNSSPVKPSPSAGPLAGLSMPPFPSAVRSESFPRPAGHGHVSHSVTNGGDCSRASQQQQQLPSTSTSVA VDVRINDLVGNGISGILHKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNPETEKGSKVIGDESMRIISRNRKSHRS LQRKPFGEIHLKVSTIRESKSDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRMSNSELMAPVDNVGISTEK LRNRLQQEGLNEAAIQDSEQIMRNEYAALQNQLLLLKQKQLILIDNLRQLETEKVDLENTVVDESQRQFNDEEASSILRQ EKFSEASASESEDDNDRNDAAEEETDDEDTAFFDTRDFLSSSNSFKSNGSELRVSSFSSDDEGLLAGESEDDIDPSIRSV GTNYPLVKRRKKLPDPVEKEKGVSLWSLIKDNIGKDLTKVCLPVYFNEPLSSLQKCCEEMEYSYLLDRAYEWGKKGNSLM RILNVAAFAVSAYASTEGKICKPFNPLLGETYEADFPDKGFRFISEKVSHHPMIVACHCEGTGWKFWADSNLKSKFWGRS IQLDPIGILTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNREYSCKLKFKEQSIIERNPHQVQGIVQDRNG KTLSTLIGKWDDSMYYINGDHGGKGKGYESSSEAHLLWKRSKPPKFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPD QRYLENGQYEMANSEKLRLEQRQRQARKMQESGWKPQWFARDKETGSYRFLGGYWEARKEGNWNSCPDIFGQIPPDHLSD EG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 796 | 796 | 0.0 | ||
| PANTHER | 1 | 796 | 796 | 0.0 | – | |
| MobiDBLite | 37 | 77 | 41 | - | – | |
| MobiDBLite | 56 | 77 | 22 | - | – | |
| ProSiteProfiles | 90 | 217 | 128 | 13.687 | ||
| SMART | 91 | 219 | 129 | 1.4E-19 | ||
| CDD | 93 | 224 | 132 | 2.35943E-59 | – | |
| SUPERFAMILY | 93 | 223 | 131 | 1.97E-21 | – | |
| Pfam | 98 | 214 | 117 | 3.3E-18 | – | |
| Coils | 259 | 279 | 21 | - | – | |
| Coils | 287 | 307 | 21 | - | – | |
| MobiDBLite | 306 | 334 | 29 | - | – | |
| MobiDBLite | 306 | 353 | 48 | - | – | |
| MobiDBLite | 335 | 351 | 17 | - | – | |
| SUPERFAMILY | 419 | 797 | 379 | 2.48E-120 | ||
| Pfam | 424 | 776 | 353 | 7.6E-127 | ||
| Gene3D | 510 | 677 | 168 | 9.9E-26 | – | |
| Coils | 729 | 749 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0180400.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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