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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0181600 |
| Transcript ID | LotjaGi1g1v0181600.1 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Myb/SANT-like DNA-binding domain protein; TAIR: AT5G27260.1 Myb/SANT-like DNA-binding domain protein; Swiss-Prot: sp|O82368|Y2988_ARATH Uncharacterized protein At2g29880; TrEMBL-Plants: tr|A0A072UYX1|A0A072UYX1_MEDTR Myb/SANT-like DNA-binding domain protein; Found in the gene: LotjaGi1g1v0181600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:35385973..35391058) extracted from Lotus japonicus Gifu genome v1.2.
TGAAGTCAATAAGTCATCATGAAGTATCTATAACTACTACAAAGGGCTTACATTTTTTCCACTATTCACGAGGCGTTTGT TTTACGGATTGAAAAAGGATTCCCGGGAATGTTTGGGCCGGAATCTACATTCCAGTGTTTGGTAGCAGATTTGAAAAACA TATACCCGGGTATCTTCCATTCCTGGGTAAGTCATATGCCCATTCAGAAGCCTTTCTCATTCCTGAAGAAAAGGGAATGG AATTTTTTGTGGGAAATTCCCTAATTACCACTACCCACGTTTTTTTTTGCTGAACCCGGGAAGTGAAGAACGGATCCCGC CCGTTTTGCCACTACCCACAATTTTTTCTGGAGGAATCCCAGAAAGTCTCTAACTGAATCCTCAGTGTCGTTGTATATAT TGTGACCTGCATTAAGTTCCAATCATCATCCCTCTCTAGATCTGGCTCACCTTGCTCTGTGCAGGTTAGAAAGTTTCGTT TTTTGTGCCCAGATTTTTCATATGTGGTGCGGATGAACATACCCATTGCTTTTGCTATATATATGTCGTGCTTTTCACCT AGCTACCCCCTTTTCAATTTGCTTTTGCATAGAGTCATTTTGCTATATCCAACGCCCCTTAGTCAAAAAATTTCACTTGC TTTTTCTATATCCATTTCAATTTTCCCATCAAGTTTCTAACTTTGCTGCTATTGACCCACCTACTTCTTTGTTTTAGGTG GTGTTTGTGGCCCTGACTATCTAAATTGGTGTGAGAAGTTGGACCCAACACTAGCTCAGTTCTCATTCCTTCGAAGGTAC CCTTAATTTGCAATGTTATTTTTTCAATTAATTGCTTTAGTTTATATTATCTTTTTCTCTTGTGTATGTGTTTGATTATT GTACTGATTTAGCCTTTTTTTAAGTTGGATGATAAACTCTATACCCAGTAGTTAAGCAAAATTTAATCTTTCTCAATCTC AAGCACTTTTTTTCCTACTTTTGTTTTTCTTCATTTATACTATTCTCGAATGATTTAACTGAGTTCATCTAATATTTACT CAAGGGTATATATGCACAAGGGGCTACTGGAACAAAACAGATGTAGTTTCTTTAGCTTTTTAGATGAACTTACACTTCAT TTTTCATTAGTTAACTAAGTCTGAATTCCATTATAGGCCTATACTTTCAATGTGTGTCTGTCATGTATCTTAGTTATTGG AATGGTTATTTGTTTTGCATGCTGATCTTTCAAAATTTAAATCTGAACAAATTGTTTCCAGTTCTGTTTTAGTTTCTTGC CATCCCTTTTCTTGAACCATTTTATTTACTATTTTTATGTGTATGTGAGATAGTATTATGGAGATCTTCCAAGTATAATT TAATTTTGATCATGGCAGAATCGATGGAACCACGACAAAGGAAGAAAAGGATTGTAGCAATATTAATAATATATTTACAG ATGTTGAATTGCTTAGCTTTGTTTATGATGTTTATATGCTACCATGTTCTAAGTAGGCGGTTGAAAAAGCGAAAGAGATC ATGGGATTGTTATGAAAGAAGTTTAATTCGAGAGGTCCATTTCCATAGGATTATTTTCATGAATGATGTGGCTTGTATTG AGAATACAAGAATGGATAGAGCGGCATTTCATAAGCTGTGTGAAATGTTGAGAACTGTAGGTGGACTACTTCCTACTAGG CATATGTGTGTTGAAGAGTTAGTGGCCATGTTCTTACACATACTAGCACATCATGCAAAAAACCGAATAATAAAAAGACA ATTTGTTAGGTCGGGGGAAACAATTAGTAGACACTTTTCAAAAGTTTTATTGGCAGTTTTGAGGTGTCATGAAGAATTGT TAAAACAACCTAGGCCTATTTTGGAAAACAGCACTGATGGAAGATGGAAATACTTCCAGGTACATAAGAAAATTAATCAA ATCTGTTTTTTATTAACATCTGACTTAAACTTTAGTTGCTATGTATTAACTGTTATAGTTATGGAAATGTATAGAATTGT CTAGGAGCTCTTGATGGCACATACATCAGGGTCAATGTGCCCGAAGCTGAAAAAAGTAAATACAGAACAAGGAAAGGCGA GATAGCTATGAATGTGTTAGGTGTATGTTCTCCGGATATGCAATTCATATATGTTTTGCCTGGGTGGGAGGGTTCAGCTG CTGACTCTAGGGTCCTCAGAGATGCTATTTCTCAACCTAATGGATTAAAGGTTCCTCAAGGTATAGAGTACAAATTTATA TAATAAACAATCCATGGTATTATGTATTTTGTCATAATAATATTAATTTTATTCATGATAGGGCATTATTATTTATGTGA TGCTGGCTATATGAATGGGGAAGGATTTCTTACTCCTTATAGATCTCAAAGATATCACCTAAGTGAGTGGAGGAATGGAG CACAACCAACTACACCAAAAGAATTTTTCAATATGAAACATTCTTCTGCTAGAAATGTGATTGAAAGATGTTTTGGACTC TTGAAAGGACGGTGGGCTATATTGAGAGAAAAATCATTCTATCCTGTTAAAACCCAAGGAAGAATAATCACTGCTTGTTG TCTTTTACATAACCATATCCGCAAAGAAATGGCTGTGGATCCATTGGAAACAAATTTAGGTGATCTAGATTCCTCAAATG AAGTCATGTTCGGTGACATGATAACCGTCGTGGAACCAAGTGATACATGGAGTCGATGGAGGGATGATTTAGCACAACAA ATGTTTAATACATGGAGAGCTGGACATCATTGATAAATTTTATGTCATGTCATGCTATTTTGTTTTTTTTTGTAAATTTT ATTTTAAATGTACTGTCCACTTTCAGTCATGTATATATCGTGAATTTGGTTTTTATAATTGTTTTATCTATGCAATAATG TATTTGTAATATAGATGGAAGGCACAACTGAATCACAGCAATCAAAAAAACGACAATGGACTGCAGAAGAAGATGCAGTA TTGGTGGCTGGTTTGTTGCAATTGGTGGATGATGGATGGAAAGCTGATGCTAACTCGTTTAAACCTGGGTATACAAAAGT ATTGGAGAAGCATCTTCAAACAAAGATTCCAGATTGCAAACTGAAAGCAAGTCCTCACATCGAATCAAGAGTAAAGCATA TCAAGAAGCAATATTTTGCAATCAAAGATATGTTTGGTCCAAGTGCAAGTGGTTTTGGGTGGGATCCTACTAGGAATATG ATTGTGGTAGAAAGAGAAATATACAGAGAATGGTGCAAGGTAATGTGTGATATACCATTTATAATAGTATTTTTTAAATT AAACATACAATTCATACATCTTTTTGATACATTTTTTTTGTTTGATGCAGTCACACCCTGTTGCAGTTGGTTTGTATGGC AAACCGTTTCCTCACTTTGATAGTCTGGATATTGTGTTTGGGAAAGATAGGGCAACAGGAACTCATGCAGAAAGTCCAGC TGATGCCGCATTTGCTATGATGAAGGAGTTTTTTCCAACAGAAGAAGGTGGTGAGCCTGAAGTAAATTTGAATGAAGATG ATAACAACAACATTGAGTCTCAATTCCCAGAAGTACCTACATATGACAACACTCAAGGAGCAAGACCAATGGGTCTTGAT GCTTCTGGATCTAGAGGTGGACGGCGTGGGTGTAAAAAAGCCAAGCAGAATGATGACATTAGTGAAAGCTTAGCCAATTC AATGAGCAAATTTGGTGAGTTCTATGCTGGAACTGTTGAGAATATTAACCGACTAACATCTTGCTTTTTACCTGAGAAAG AGACAGCTGATCGGAGGACTCAAGTTTACTCAATGTTAAGAGAAATTGAAGGATTGTCTAACGCGGATGTGATAAAGGCA GCTATATTGATCACCAACAACAGTAATCTGAGCGACTGCTTTTTTTCTGTTGATACACTCGAAATGAAGGAGGAATTCGT GCGCTATGTTTTGAATAACAATGGTGTTTGAATTTGTTAGCTTTATATTTGTTAATTTTATGAGTACTTAGTATTTAAAT TTCGTTTTTAGAAGGACAAGTCTTAATTAAGTTTGAATAATATGCAGTTCTAGTATTATTTCACAATGGTGTTTGAATTT GTAACTGAAAGATTGCATATTTATTGGAGTTCCCAGTTCTATCACAAGGTAAATTGAGCTGCTGCAGAACTGCAATATTT GATGCTGTGAAATTTGCATTTTGAGCTGGTACCGATCTGCAAAATTGGTGTTTGCATCTTCTCTAAGATGTTGCTGCAGC TATATTGGTGTAGTTCTTGGCTGGTTTCGTTTGATATGCTGGTTCACTCACCTTATTGGAGGTTGCCTTGGTCTTGCTCT TTTCATTTCTAGTTAGTTGATGTACTAGTTAGTTTGGTTCTAGCTTTCTAGTCTGTTGTTCTTGTTCTGTTTTTTTTTTT TTTTTTTTTTTTTTTTCTGTTTTTGCATTGTATCTTCCTTTGTTGTTGTTCTCACTTGAGAGAGTTTGTTCTCAAGATCA CCTTATTTCTAATATATTTTCATTTTCAAAAAAAAGATTGCATATTTATATCAGTTTTTAATTGGTTTTGTTGGTTGGAA ACTTTGGTGCTGCAAATGGTATCTATTTGGGATTTGAGGAACTCAGTTGGATTGTGTTTTGGCTTCACTGGTGTGTGCTT TGGTTAATCAAGGTCTGTTGAAATTTTGGTGATTTGTGGGTGGGCTTTTGGCGTGTTCTTGGTGGGCCATGGAGTGGATT TTGGAAGCAATTTTCACCTTCAATAGGAGGCTTGTTAGTGCTGATTTGTTGCAGCATTCCTCTGGTTATTCTACACTCTT GGTGCTTGTTTCATTCCAAAGTCATGAGTGTTATATAAGAACTGGTAGGTCCTATGGTATCCCTTATTTATTTAACACTT GCTTACCCATATTCTGAGTTTCCTGGCACTGTACTGGCTGAATTGATTGTTGAATATTGTTTCCTTTGGAAAGTACTGGT ACATGCACCATAATTTGGGGAAATAATAAAATGTTGTTTTACTTCATATTTACAGTTTTTTCCATGTGAGCCTCAGCTTT CCTTCTTATTTCAGCGGACAAGAGTACAGGATTGGCATATTTTGGA
CDS sequence (LotjaGi1g1v0181600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGGCACAACTGAATCACAGCAATCAAAAAAACGACAATGGACTGCAGAAGAAGATGCAGTATTGGTGGCTGGTTT GTTGCAATTGGTGGATGATGGATGGAAAGCTGATGCTAACTCGTTTAAACCTGGGTATACAAAAGTATTGGAGAAGCATC TTCAAACAAAGATTCCAGATTGCAAACTGAAAGCAAGTCCTCACATCGAATCAAGAGTAAAGCATATCAAGAAGCAATAT TTTGCAATCAAAGATATGTTTGGTCCAAGTGCAAGTGGTTTTGGGTGGGATCCTACTAGGAATATGATTGTGGTAGAAAG AGAAATATACAGAGAATGGTGCAAGTCACACCCTGTTGCAGTTGGTTTGTATGGCAAACCGTTTCCTCACTTTGATAGTC TGGATATTGTGTTTGGGAAAGATAGGGCAACAGGAACTCATGCAGAAAGTCCAGCTGATGCCGCATTTGCTATGATGAAG GAGTTTTTTCCAACAGAAGAAGGTGGTGAGCCTGAAGTAAATTTGAATGAAGATGATAACAACAACATTGAGTCTCAATT CCCAGAAGTACCTACATATGACAACACTCAAGGAGCAAGACCAATGGGTCTTGATGCTTCTGGATCTAGAGGTGGACGGC GTGGGTGTAAAAAAGCCAAGCAGAATGATGACATTAGTGAAAGCTTAGCCAATTCAATGAGCAAATTTGGTGAGTTCTAT GCTGGAACTGTTGAGAATATTAACCGACTAACATCTTGCTTTTTACCTGAGAAAGAGACAGCTGATCGGAGGACTCAAGT TTACTCAATGTTAAGAGAAATTGAAGGATTGTCTAACGCGGATGTGATAAAGGCAGCTATATTGATCACCAACAACAGTA ATCTGAGCGACTGCTTTTTTTCTGTTGATACACTCGAAATGAAGGAGGAATTCGTGCGCTATGTTTTGAATAACAATGGT GTTTGA
Protein sequence (LotjaGi1g1v0181600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGTTESQQSKKRQWTAEEDAVLVAGLLQLVDDGWKADANSFKPGYTKVLEKHLQTKIPDCKLKASPHIESRVKHIKKQY FAIKDMFGPSASGFGWDPTRNMIVVEREIYREWCKSHPVAVGLYGKPFPHFDSLDIVFGKDRATGTHAESPADAAFAMMK EFFPTEEGGEPEVNLNEDDNNNIESQFPEVPTYDNTQGARPMGLDASGSRGGRRGCKKAKQNDDISESLANSMSKFGEFY AGTVENINRLTSCFLPEKETADRRTQVYSMLREIEGLSNADVIKAAILITNNSNLSDCFFSVDTLEMKEEFVRYVLNNNG V
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 304 | 300 | 1.2E-80 | – | |
| PANTHER | 5 | 304 | 300 | 1.2E-80 | – | |
| Pfam | 14 | 110 | 97 | 6.4E-10 | ||
| MobiDBLite | 191 | 223 | 33 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0181600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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