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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0183400 |
| Transcript ID | LotjaGi1g1v0183400.2 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleobase-ascorbate transporter-like protein; TAIR: AT5G62890.1 Xanthine/uracil permease family protein; Swiss-Prot: sp|Q27GI3|NAT6_ARATH Nucleobase-ascorbate transporter 6; TrEMBL-Plants: tr|I1KCI8|I1KCI8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0183400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:35746373..35752517) extracted from Lotus japonicus Gifu genome v1.2.
TTTAAGGAAATTAACTCTACTAAAGTTTCTAGCTACTCTATCATTTTCTGCTCTTAGTGTTGGACAAGTTTCAGTTTCAG TTTCAGTTTCAGTTTCACTCCCTTGTTTTTATGTTTTTGGTTTAACTAGTAGGTGTACTCATTGTAAGCTTTTTCTTCTC TTGTGGGTCTTTTTGCTTTGTGGCATTGAAGATCTGGGATTTGGGTTTCTAGATTCATTGATTTCTTTCTGGTTTTGTTG CTTTTTTTCTTCATTGTTTAGAGCTAGAAAGAGAAGGAAGAAGCTATGGCAGGAGGGGGAGCTCCAAAGTCAGATGAGCC ACAACCACATCCACCAAAGGATCAGCTACCCAATATTTCTTACTGCATTACCAGTCCTCCTCCATGGCGTGAGTGTGTTC TCCTTATCTTAGATTCCATAGTGGAAGAAAAAAAATTCATCTTTTTCAGTTCCCAGATTTTGGAAAGTTACTCATTTTTT AGATGGTTGAAGTGGAATAATGAAAAAAAAAACTACTTTTGGGTTTGGAGCCTTGGCTCTAGTTTTCTATTTTTATGCCA GTGGTAATCCAATTATCTTTACTTCTTATGCAATTGGAGCCAATTTAAAGTCCTACTTTCCAATTGATTGGAATCTTACT TTGTTTTCTACTCTCAATTATAATTACTCATTCATATTATGGTTCTTCCAGTTATATCCAGATCTAGATTTGGGGCTGGG GAAGCAATTTGAGTGCTACTTCCAAATTTGGCCCATGATGTGATCAGTTTTAAATAGTTTAGTAGTTAATAATTGACAGC CTTTTTTTTTAATTGAAAAGGGCTATATTATTCACTTTCTTTTTTGGGGTTGCTTTATGACAATTGACACCACTTAGATC ATACACTCAAGAATGTCTTGTGGAATAATGTCTAAAGGAATATTAACTGATTGGAATATTTGGCTAACTCAAATGACAGA TTCTTTCATCATTAGTAGTTTATGTTGAAAATTTCAAGAATCTCCCTGCCTCCCTTTTGTTTTGAGATTCACTTCGCTTT TGTTGATTTTTTTCCTTTCCAATTGATCTAATGAGAAATTTTCTGATGCAGCCGAGGCTATACTTCTTGGCTTTCAACAT TTTCTTGTAATGCTTGGTACAACTGTGCTCATTCCCTCTGCTCTTGTTCCTCAGATGGGAGGTGGCAATGTAAGGAGTAG CAGATTAAATTTACTTAAAAGCAGCAATTTTTAAATTTGATATGAATATTGTGGAAATTCAATCATATGATTGGACTTGC ATTTTTCTCTTGGCCAAAAGTTCTATAAAGAATAATAATATTCCATTTTGTGCAGAATGAGAAGGCAAGAGTTATCGAAA CGCTACTTTTTGTAGCTGGTATTAACACACTGCTACAAACACTGTTTGGAAGTCGACTGCCCGCAGTTATTGGAGGCTCT TATACCTATGTTGCCACCACAATCTCAATTATTCTTGCTGGTCGATTCAGTGATGAACCTGATCCAATAGAGGTCTTGTG ATCAGAAGAAATCTAGCTATACTAATTGATGCATTGCCGATATGCTTGCTATATTACTTTATATTGTAAACAGATCATAT TTAACCTAAGCACCCTGTGATTTGTAATTGCGTTGTGTACTAATCTTCTCTGTTGTTCCACCAGAAACTAACAATCAACT ATCGTTGGATCATAAATTTAATTTAAACACTACAATAAGACATTAGATAAATTTCTGTGCTAATTTGATTGGAACTGCTT GATAACTTTCTTTTTCCTGTTTTTTTGTCTTGAATCCATTCAGAAATTCAAGAAGATAATGAGGGCAATCCAAGGTGCTC TTATTGTTGCTTCGACTCTTCAAATAGTACTAGGCTTTAGTGGCCTATGGCGTAATGTTGCGAGGTTGGTCCCAAGTTCC TGCTAAGAAGTTGCATTATGCTATCAGTTCAGAGTTATTATTCATTTCATTTATTGGCACAGATTTGTAACTTATTTCCC TTGGGGAAGCAGTAATGAACATTAGTGATTTAGTGTATACAATACATATTTTGTTGTTTGATATTCATTAAAACAGAGTG TTAGGTAACATTAATTTCAATCATTCGCTGTCTTATTTGAGTTGACAGTGTCTATATTGAACAGATTCAAGAATATCTTT TACATGTATGTCATTTTCCATTTTACCAAGCTAAATTGATTTTTGAATTAGATATTATAGCTTGAGTGATGCTATTGGAT TTGGATTAAGTAGGTATTCCCAGAAACTGAAAATATTAAAAGAACTGAAAAATCTTGCGATTGAATTCAGTATTCCCATC TGATGTAAGTTCAATTTTTTACTTCAGGTTCTTAAGTCCACTTTCAGCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGC TGTATGAATTAGGTTTTCCTGGGGTAAGCCTTCTACATATTTACAATTTCATATTTAACATGAATTGAGGAAGTTTCAAC ATTGAGAAACCTATCTCGTGTGTAGGTAGCTAAATGTATAGAGATTGGACTTCCGGAGCTTGTGTTGATAGTATTTGTTT CACAGGTAGAGTTCCTTAAAGTTGCATACATGATACACGTACTGTCTTGGAAATTTTCTAAACGTTAGCATTATGATATT AGCTCATTTTGTTCTCTTTATTCTTCTAGCATTTTGTTTTAATGAGTTTGTTAACTATGGTGGTTGTCGTGCAGTATGTG CCACATGTTCTACACAAGGGGAAACATATCTTTGATCGTTTCGCTGTTATATTTACAATTGTAATTGTATGGATATATGC TCATCTTCTCACTGTTGGAGGGGCCTATAACAATGCGGCACATAAGACACAAATATCCTGCCGCACTGATCGTGCTGGAC TTATTGATAACGCTCCTTGGTTAGTTGTGTGACTTCATTGAAATTATCCTAAATAGCATTTTTTTCTGTGGCAAATGTGT TAACCCTATAGTTTTAACATGTTTTTTATATTAATCTTGTGATTTAGAATCTTCTGATAGGTTTCCTACCACAATAACCA GGTGATTACGGAACACAATATGTGGACGTGACAACTGGTTTTGCATTTGTGAAGTAGAGGGTGGCCAAGTTAATCCATTT TCCCTTGTAAAAGCATAGAAACTGTGTTGGCCACCATTTAATACCACAGTGGCCAAATGGTCAACACTGGACTAACAACA ATTGGTCATGACAGGGACCCAATTATAAGCTTTATTTTTGGGGACTGTTGAGAAGTCCCACATTGAGTAGAGATATGGCC AAGATAACCCATAGATATGGAAAGACAATACTCACCTTTAAGCTAGCATTTGGGGTAGAGTTAGGTCTCCCAAATTTAAA TATGGTGTCAAAGTCTATCCTAGATCGTTTATTGGAGACCACCTATATATTGGCCACATGCAGATGTTCATTACTGCAAG CCCCACGCTCCACGTGTCCCGGGGCGTGAAGGGGTGTGTTGAGAAGTTCCACATTGACTACAAATATGGTCAAGATGTAT GTGGAAAGAGAATCCTCACCTCTAAGCTAGCTTTTGGAGTAGAGTTAGGCCTCTCAAATTTTAATAGGGACTAATTTTAA AATTTGGCAAAATCATATTCTGCGTGTTCATTGAAAATGAGGCTGAATTATGTTCATTGATCAATTTTCTCTTCTAGATG ATTCACAGAAGTGGATATTTGTCACATGTGACGCTCTTCATTCTTTTGTAACACTTTGAACTAACTATTATAGACCTTAG AGCACAACCATTATTGATATTTCTGATGTTAGATTCTTGAGATATTGGTTTTCTTCGTTGGTAAGAATCAACTATTTAGG CTAGTTTTGTGAGTTAAAACTTACTGAAAAGAATTTCTCATGGATTTTGAGTTTGCAGGATTAGAGTTCCATACCCCTTT CAATGGGGAGCACCTTCATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCAGCTTTTGTTGCTCTTGTAGAGGTAAG GTTTTCTTATTTATTTCTAAATTCGAATAAGAATCTCACTTTTGTTAAGTTCTCTATCTAGCAGACAACATATAATCTTA CACTGTGCCAGTTGACCTTTAGCTAAGTTATCCCCTTAAAGAAAGTTCATGATGAAATAAAGTCTTGAGTTCTGCTTCTG GTAATGAAATTAGGTAAATAGTAATTGTGGTAGTTTTCCGTTTGTCATAAATGGTTGATTGTTTTCCTGAAGGGCAATGG AAACAAATTGATGATGTATGATTTTTGTTTTAGAATCTATATGATTGATGATTGACACCAGGGGCAGGGGTGTTATTCAA ATTACTTTTCCAATTAATGCTTCACACCATCATGATGCTCAAATCCAACCTGCATTATCTTCCTTTGTAACAAAAAAAAA AATTCAACTTGCATTACTGCATTTAATAATCTTACCATGTACACGATGGCATTCTTGGGATTGATTATCTGGCTTATATA CTTGTACTTTAGCTCAGAGTTAGTGTTATATAGTTGTTAATTTGAATAGGAGTATAGGACTAAAATTAAATTATCTACTT ACATGTTTCATTTGTTACAAACAGTCCACTGGAGCTTTCATTGCAGTATATAGGTATGCAAGTGCAACACCATTACCACC ATCTATTCTTAGTCGTGGTATTGGTTGGCAGGTATGCAGATGGCTAATACTTCAAAATTTAAATAGCAGTAAAAAATTTC AAGTATAATACCTCATGCATCTTATGTTTGCCCTTAGGGAGTTGGCATTCTGTTATCAGGATTGTTTGGAACAGTTACTG GATCTTCTGTATCCGTGTAAGACTGAAATTTCTGTTTATGTTCTTTAGTTTAGAGAAAACACAACTTCCTTGATGATGAA ACAAATCTGTTTGGTTTCCCTACAGAGAAAATGCAGGTCTTTTGGCTCAGACCCGTGTTGGTAGTAGAAGAGTTGTGCAA ATATCAGCTGGATTTATGATTTTCTTTTCGATTCTTGGTAAGTTGGTGAAGCTTGATATATTTGTAATTTGATCACCCAC TTTCCCTTATCTGGGTACATTCCCTTCCCTTTTAAGCTAATTTTTCCTTTGCTGTGTAGGAAAATTTGGAGCTGTTTTCG CCTCCATCCCAGCTCCCATTTTTGCTGCCCTGTACTGCTTGTTCTTCGCTTATGTCGGTACGTTTAGTTTAACACACACC CACGCTTGCATTTATGGTTATACTTATGAGTTATGACACTTACAACAAACACAATGTAATGTAATGTAATGCTCCAATTT CGCTTGTATAGGTGCCGGAGGAATTAGTTTTCTTCAGTTTTGCAACCTCAACAGCTTTAGAACAAAGTTCATATTAGGCT TCTCTATCTTCCTCGGCTTGTCTATACCACAGTACTTCAACGAGTACACGGCAATCAATGGCTTTGGTCCGGTCCACACC GGCGCCAGATGGGTATGGATAATTATGCATATAACTATACATTGTTAGCATGTTTGCATTAACTAATCTTTACTGATAGT CAATTCACTCAATTCTAGCACCAACAGCTACTCACAGTTGTTTTCCCTAGAATTGATTTTGGCTTTAGAATCAATTGGAG AAAGATTTCCAAATATGCCGATAAACTAAGATTTGTGACCTTAGTTCTAACTTTTCATTTAGTTAATTTGCACTTTTTTG TTATCTTGGTATGGATAATTTGGATATATATATATATATATATAACATGTTTGAATTAGCTCATTTTTTCTCAAAAGTCA AAACCAATTCCTTCACGAGAAGCTACTCAAGGTTGTTATCCCCAGGATTGATTTTGACTTTACAATCAATTGTAGAAGGA TTTCCATACATCCCAATCAACCTTATTTTTGACCTTAGCTTAAAACTTTTCATTGAGTTAATTTGCACTTTTTTTTATCT TGGCAGTTCAATGATATAATCAATGTTCCGTTCCAATCAAAACCATTTGTTGGGGGTGTTGTGGCATATTTCTTAGACAA CACTTTATACAAGCGAGATTCTGCTATAAGGAAGGACAGAGGGAAACATTGGTGGGACAAGTACAAGTCCTTCAAAGGGG ACACGAGAAGTGAAGAGTTCTATTCACTACCATTCAATCTAAACAAGTACTTCCCATCTGTTTAA
CDS sequence (LotjaGi1g1v0183400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGGAGGGGGAGCTCCAAAGTCAGATGAGCCACAACCACATCCACCAAAGGATCAGCTACCCAATATTTCTTACTG CATTACCAGTCCTCCTCCATGGCCCGAGGCTATACTTCTTGGCTTTCAACATTTTCTTGTAATGCTTGGTACAACTGTGC TCATTCCCTCTGCTCTTGTTCCTCAGATGGGAGGTGGCAATAATGAGAAGGCAAGAGTTATCGAAACGCTACTTTTTGTA GCTGGTATTAACACACTGCTACAAACACTGTTTGGAAGTCGACTGCCCGCAGTTATTGGAGGCTCTTATACCTATGTTGC CACCACAATCTCAATTATTCTTGCTGGTCGATTCAGTGATGAACCTGATCCAATAGAGAAATTCAAGAAGATAATGAGGG CAATCCAAGGTGCTCTTATTGTTGCTTCGACTCTTCAAATAGTACTAGGCTTTAGTGGCCTATGGCGTAATGTTGCGAGG TTCTTAAGTCCACTTTCAGCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGCTGTATGAATTAGGTTTTCCTGGGGTAGC TAAATGTATAGAGATTGGACTTCCGGAGCTTGTGTTGATAGTATTTGTTTCACAGTATGTGCCACATGTTCTACACAAGG GGAAACATATCTTTGATCGTTTCGCTGTTATATTTACAATTGTAATTGTATGGATATATGCTCATCTTCTCACTGTTGGA GGGGCCTATAACAATGCGGCACATAAGACACAAATATCCTGCCGCACTGATCGTGCTGGACTTATTGATAACGCTCCTTG GATTAGAGTTCCATACCCCTTTCAATGGGGAGCACCTTCATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCAGCTT TTGTTGCTCTTGTAGAGTCCACTGGAGCTTTCATTGCAGTATATAGGTATGCAAGTGCAACACCATTACCACCATCTATT CTTAGTCGTGGTATTGGTTGGCAGGGAGTTGGCATTCTGTTATCAGGATTGTTTGGAACAGTTACTGGATCTTCTGTATC CGTAGAAAATGCAGGTCTTTTGGCTCAGACCCGTGTTGGTAGTAGAAGAGTTGTGCAAATATCAGCTGGATTTATGATTT TCTTTTCGATTCTTGGAAAATTTGGAGCTGTTTTCGCCTCCATCCCAGCTCCCATTTTTGCTGCCCTGTACTGCTTGTTC TTCGCTTATGTCGGTGCCGGAGGAATTAGTTTTCTTCAGTTTTGCAACCTCAACAGCTTTAGAACAAAGTTCATATTAGG CTTCTCTATCTTCCTCGGCTTGTCTATACCACAGTACTTCAACGAGTACACGGCAATCAATGGCTTTGGTCCGGTCCACA CCGGCGCCAGATGGTTCAATGATATAATCAATGTTCCGTTCCAATCAAAACCATTTGTTGGGGGTGTTGTGGCATATTTC TTAGACAACACTTTATACAAGCGAGATTCTGCTATAAGGAAGGACAGAGGGAAACATTGGTGGGACAAGTACAAGTCCTT CAAAGGGGACACGAGAAGTGAAGAGTTCTATTCACTACCATTCAATCTAAACAAGTACTTCCCATCTGTTTAA
Protein sequence (LotjaGi1g1v0183400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGGGAPKSDEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHFLVMLGTTVLIPSALVPQMGGGNNEKARVIETLLFV AGINTLLQTLFGSRLPAVIGGSYTYVATTISIILAGRFSDEPDPIEKFKKIMRAIQGALIVASTLQIVLGFSGLWRNVAR FLSPLSAVPLVSLVGFGLYELGFPGVAKCIEIGLPELVLIVFVSQYVPHVLHKGKHIFDRFAVIFTIVIVWIYAHLLTVG GAYNNAAHKTQISCRTDRAGLIDNAPWIRVPYPFQWGAPSFDAGEAFAMMMAAFVALVESTGAFIAVYRYASATPLPPSI LSRGIGWQGVGILLSGLFGTVTGSSVSVENAGLLAQTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIFAALYCLF FAYVGAGGISFLQFCNLNSFRTKFILGFSIFLGLSIPQYFNEYTAINGFGPVHTGARWFNDIINVPFQSKPFVGGVVAYF LDNTLYKRDSAIRKDRGKHWWDKYKSFKGDTRSEEFYSLPFNLNKYFPSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 37 | 37 | - | – | |
| PANTHER | 3 | 530 | 528 | 0.0 | – | |
| PANTHER | 3 | 530 | 528 | 0.0 | – | |
| Pfam | 36 | 440 | 405 | 1.4E-70 | ||
| Phobius | 38 | 61 | 24 | - | – | |
| TMHMM | 38 | 60 | 23 | - | – | |
| Phobius | 62 | 72 | 11 | - | – | |
| TMHMM | 73 | 92 | 20 | - | – | |
| Phobius | 73 | 91 | 19 | - | – | |
| Phobius | 92 | 96 | 5 | - | – | |
| TMHMM | 97 | 116 | 20 | - | – | |
| Phobius | 97 | 116 | 20 | - | – | |
| Phobius | 117 | 136 | 20 | - | – | |
| TMHMM | 137 | 156 | 20 | - | – | |
| Phobius | 137 | 155 | 19 | - | – | |
| Phobius | 156 | 160 | 5 | - | – | |
| TMHMM | 161 | 183 | 23 | - | – | |
| Phobius | 161 | 181 | 21 | - | – | |
| Phobius | 182 | 192 | 11 | - | – | |
| Phobius | 193 | 211 | 19 | - | – | |
| Phobius | 212 | 222 | 11 | - | – | |
| TMHMM | 221 | 243 | 23 | - | – | |
| Phobius | 223 | 243 | 21 | - | – | |
| Phobius | 244 | 285 | 42 | - | – | |
| Phobius | 286 | 311 | 26 | - | – | |
| TMHMM | 286 | 308 | 23 | - | – | |
| Phobius | 312 | 330 | 19 | - | – | |
| Phobius | 331 | 355 | 25 | - | – | |
| Phobius | 356 | 366 | 11 | - | – | |
| TMHMM | 364 | 386 | 23 | - | – | |
| Phobius | 367 | 386 | 20 | - | – | |
| Phobius | 387 | 391 | 5 | - | – | |
| TMHMM | 390 | 412 | 23 | - | – | |
| Phobius | 392 | 412 | 21 | - | – | |
| Phobius | 413 | 423 | 11 | - | – | |
| Phobius | 424 | 440 | 17 | - | – | |
| TMHMM | 424 | 441 | 18 | - | – | |
| Phobius | 441 | 530 | 90 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0183400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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