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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0183400 |
| Transcript ID | LotjaGi1g1v0183400.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleobase-ascorbate transporter-like protein; TAIR: AT5G62890.4 Xanthine/uracil permease family protein; Swiss-Prot: sp|Q27GI3|NAT6_ARATH Nucleobase-ascorbate transporter 6; TrEMBL-Plants: tr|I1KCI8|I1KCI8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0183400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:35746658..35751874) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCAGGAGGGGGAGCTCCAAAGTCAGATGAGCCACAACCACATCCACCAAAGGATCAGCTACCCAATATTTCTTACTG CATTACCAGTCCTCCTCCATGGCGTGAGTGTGTTCTCCTTATCTTAGATTCCATAGTGGAAGAAAAAAAATTCATCTTTT TCAGTTCCCAGATTTTGGAAAGTTACTCATTTTTTAGATGGTTGAAGTGGAATAATGAAAAAAAAAACTACTTTTGGGTT TGGAGCCTTGGCTCTAGTTTTCTATTTTTATGCCAGTGGTAATCCAATTATCTTTACTTCTTATGCAATTGGAGCCAATT TAAAGTCCTACTTTCCAATTGATTGGAATCTTACTTTGTTTTCTACTCTCAATTATAATTACTCATTCATATTATGGTTC TTCCAGTTATATCCAGATCTAGATTTGGGGCTGGGGAAGCAATTTGAGTGCTACTTCCAAATTTGGCCCATGATGTGATC AGTTTTAAATAGTTTAGTAGTTAATAATTGACAGCCTTTTTTTTTAATTGAAAAGGGCTATATTATTCACTTTCTTTTTT GGGGTTGCTTTATGACAATTGACACCACTTAGATCATACACTCAAGAATGTCTTGTGGAATAATGTCTAAAGGAATATTA ACTGATTGGAATATTTGGCTAACTCAAATGACAGATTCTTTCATCATTAGTAGTTTATGTTGAAAATTTCAAGAATCTCC CTGCCTCCCTTTTGTTTTGAGATTCACTTCGCTTTTGTTGATTTTTTTCCTTTCCAATTGATCTAATGAGAAATTTTCTG ATGCAGCCGAGGCTATACTTCTTGGCTTTCAACATTTTCTTGTAATGCTTGGTACAACTGTGCTCATTCCCTCTGCTCTT GTTCCTCAGATGGGAGGTGGCAATGTAAGGAGTAGCAGATTAAATTTACTTAAAAGCAGCAATTTTTAAATTTGATATGA ATATTGTGGAAATTCAATCATATGATTGGACTTGCATTTTTCTCTTGGCCAAAAGTTCTATAAAGAATAATAATATTCCA TTTTGTGCAGAATGAGAAGGCAAGAGTTATCGAAACGCTACTTTTTGTAGCTGGTATTAACACACTGCTACAAACACTGT TTGGAAGTCGACTGCCCGCAGTTATTGGAGGCTCTTATACCTATGTTGCCACCACAATCTCAATTATTCTTGCTGGTCGA TTCAGTGATGAACCTGATCCAATAGAGGTCTTGTGATCAGAAGAAATCTAGCTATACTAATTGATGCATTGCCGATATGC TTGCTATATTACTTTATATTGTAAACAGATCATATTTAACCTAAGCACCCTGTGATTTGTAATTGCGTTGTGTACTAATC TTCTCTGTTGTTCCACCAGAAACTAACAATCAACTATCGTTGGATCATAAATTTAATTTAAACACTACAATAAGACATTA GATAAATTTCTGTGCTAATTTGATTGGAACTGCTTGATAACTTTCTTTTTCCTGTTTTTTTGTCTTGAATCCATTCAGAA ATTCAAGAAGATAATGAGGGCAATCCAAGGTGCTCTTATTGTTGCTTCGACTCTTCAAATAGTACTAGGCTTTAGTGGCC TATGGCGTAATGTTGCGAGGTTGGTCCCAAGTTCCTGCTAAGAAGTTGCATTATGCTATCAGTTCAGAGTTATTATTCAT TTCATTTATTGGCACAGATTTGTAACTTATTTCCCTTGGGGAAGCAGTAATGAACATTAGTGATTTAGTGTATACAATAC ATATTTTGTTGTTTGATATTCATTAAAACAGAGTGTTAGGTAACATTAATTTCAATCATTCGCTGTCTTATTTGAGTTGA CAGTGTCTATATTGAACAGATTCAAGAATATCTTTTACATGTATGTCATTTTCCATTTTACCAAGCTAAATTGATTTTTG AATTAGATATTATAGCTTGAGTGATGCTATTGGATTTGGATTAAGTAGGTATTCCCAGAAACTGAAAATATTAAAAGAAC TGAAAAATCTTGCGATTGAATTCAGTATTCCCATCTGATGTAAGTTCAATTTTTTACTTCAGGTTCTTAAGTCCACTTTC AGCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGCTGTATGAATTAGGTTTTCCTGGGGTAAGCCTTCTACATATTTACA ATTTCATATTTAACATGAATTGAGGAAGTTTCAACATTGAGAAACCTATCTCGTGTGTAGGTAGCTAAATGTATAGAGAT TGGACTTCCGGAGCTTGTGTTGATAGTATTTGTTTCACAGGTAGAGTTCCTTAAAGTTGCATACATGATACACGTACTGT CTTGGAAATTTTCTAAACGTTAGCATTATGATATTAGCTCATTTTGTTCTCTTTATTCTTCTAGCATTTTGTTTTAATGA GTTTGTTAACTATGGTGGTTGTCGTGCAGTATGTGCCACATGTTCTACACAAGGGGAAACATATCTTTGATCGTTTCGCT GTTATATTTACAATTGTAATTGTATGGATATATGCTCATCTTCTCACTGTTGGAGGGGCCTATAACAATGCGGCACATAA GACACAAATATCCTGCCGCACTGATCGTGCTGGACTTATTGATAACGCTCCTTGGTTAGTTGTGTGACTTCATTGAAATT ATCCTAAATAGCATTTTTTTCTGTGGCAAATGTGTTAACCCTATAGTTTTAACATGTTTTTTATATTAATCTTGTGATTT AGAATCTTCTGATAGGTTTCCTACCACAATAACCAGGTGATTACGGAACACAATATGTGGACGTGACAACTGGTTTTGCA TTTGTGAAGTAGAGGGTGGCCAAGTTAATCCATTTTCCCTTGTAAAAGCATAGAAACTGTGTTGGCCACCATTTAATACC ACAGTGGCCAAATGGTCAACACTGGACTAACAACAATTGGTCATGACAGGGACCCAATTATAAGCTTTATTTTTGGGGAC TGTTGAGAAGTCCCACATTGAGTAGAGATATGGCCAAGATAACCCATAGATATGGAAAGACAATACTCACCTTTAAGCTA GCATTTGGGGTAGAGTTAGGTCTCCCAAATTTAAATATGGTGTCAAAGTCTATCCTAGATCGTTTATTGGAGACCACCTA TATATTGGCCACATGCAGATGTTCATTACTGCAAGCCCCACGCTCCACGTGTCCCGGGGCGTGAAGGGGTGTGTTGAGAA GTTCCACATTGACTACAAATATGGTCAAGATGTATGTGGAAAGAGAATCCTCACCTCTAAGCTAGCTTTTGGAGTAGAGT TAGGCCTCTCAAATTTTAATAGGGACTAATTTTAAAATTTGGCAAAATCATATTCTGCGTGTTCATTGAAAATGAGGCTG AATTATGTTCATTGATCAATTTTCTCTTCTAGATGATTCACAGAAGTGGATATTTGTCACATGTGACGCTCTTCATTCTT TTGTAACACTTTGAACTAACTATTATAGACCTTAGAGCACAACCATTATTGATATTTCTGATGTTAGATTCTTGAGATAT TGGTTTTCTTCGTTGGTAAGAATCAACTATTTAGGCTAGTTTTGTGAGTTAAAACTTACTGAAAAGAATTTCTCATGGAT TTTGAGTTTGCAGGATTAGAGTTCCATACCCCTTTCAATGGGGAGCACCTTCATTTGATGCAGGTGAAGCCTTTGCCATG ATGATGGCAGCTTTTGTTGCTCTTGTAGAGGTAAGGTTTTCTTATTTATTTCTAAATTCGAATAAGAATCTCACTTTTGT TAAGTTCTCTATCTAGCAGACAACATATAATCTTACACTGTGCCAGTTGACCTTTAGCTAAGTTATCCCCTTAAAGAAAG TTCATGATGAAATAAAGTCTTGAGTTCTGCTTCTGGTAATGAAATTAGGTAAATAGTAATTGTGGTAGTTTTCCGTTTGT CATAAATGGTTGATTGTTTTCCTGAAGGGCAATGGAAACAAATTGATGATGTATGATTTTTGTTTTAGAATCTATATGAT TGATGATTGACACCAGGGGCAGGGGTGTTATTCAAATTACTTTTCCAATTAATGCTTCACACCATCATGATGCTCAAATC CAACCTGCATTATCTTCCTTTGTAACAAAAAAAAAAATTCAACTTGCATTACTGCATTTAATAATCTTACCATGTACACG ATGGCATTCTTGGGATTGATTATCTGGCTTATATACTTGTACTTTAGCTCAGAGTTAGTGTTATATAGTTGTTAATTTGA ATAGGAGTATAGGACTAAAATTAAATTATCTACTTACATGTTTCATTTGTTACAAACAGTCCACTGGAGCTTTCATTGCA GTATATAGGTATGCAAGTGCAACACCATTACCACCATCTATTCTTAGTCGTGGTATTGGTTGGCAGGTATGCAGATGGCT AATACTTCAAAATTTAAATAGCAGTAAAAAATTTCAAGTATAATACCTCATGCATCTTATGTTTGCCCTTAGGGAGTTGG CATTCTGTTATCAGGATTGTTTGGAACAGTTACTGGATCTTCTGTATCCGTGTAAGACTGAAATTTCTGTTTATGTTCTT TAGTTTAGAGAAAACACAACTTCCTTGATGATGAAACAAATCTGTTTGGTTTCCCTACAGAGAAAATGCAGGTCTTTTGG CTCAGACCCGTGTTGGTAGTAGAAGAGTTGTGCAAATATCAGCTGGATTTATGATTTTCTTTTCGATTCTTGGTAAGTTG GTGAAGCTTGATATATTTGTAATTTGATCACCCACTTTCCCTTATCTGGGTACATTCCCTTCCCTTTTAAGCTAATTTTT CCTTTGCTGTGTAGGAAAATTTGGAGCTGTTTTCGCCTCCATCCCAGCTCCCATTTTTGCTGCCCTGTACTGCTTGTTCT TCGCTTATGTCGGTACGTTTAGTTTAACACACACCCACGCTTGCATTTATGGTTATACTTATGAGTTATGACACTTACAA CAAACACAATGTAATGTAATGTAATGCTCCAATTTCGCTTGTATAGGTGCCGGAGGAATTAGTTTTCTTCAGTTTTGCAA CCTCAACAGCTTTAGAACAAAGTTCATATTAGGCTTCTCTATCTTCCTCGGCTTGTCTATACCACAGTACTTCAACGAGT ACACGGCAATCAATGGCTTTGGTCCGGTCCACACCGGCGCCAGATGGGTATGGATAATTATGCATATAACTATACATTGT TAGCATGTTTGCATTAA
CDS sequence (LotjaGi1g1v0183400.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGGAGGGGGAGCTCCAAAGTCAGATGAGCCACAACCACATCCACCAAAGGATCAGCTACCCAATATTTCTTACTG CATTACCAGTCCTCCTCCATGGCCCGAGGCTATACTTCTTGGCTTTCAACATTTTCTTGTAATGCTTGGTACAACTGTGC TCATTCCCTCTGCTCTTGTTCCTCAGATGGGAGGTGGCAATAATGAGAAGGCAAGAGTTATCGAAACGCTACTTTTTGTA GCTGGTATTAACACACTGCTACAAACACTGTTTGGAAGTCGACTGCCCGCAGTTATTGGAGGCTCTTATACCTATGTTGC CACCACAATCTCAATTATTCTTGCTGGTCGATTCAGTGATGAACCTGATCCAATAGAGAAATTCAAGAAGATAATGAGGG CAATCCAAGGTGCTCTTATTGTTGCTTCGACTCTTCAAATAGTACTAGGCTTTAGTGGCCTATGGCGTAATGTTGCGAGG TTCTTAAGTCCACTTTCAGCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGCTGTATGAATTAGGTTTTCCTGGGGTAGC TAAATGTATAGAGATTGGACTTCCGGAGCTTGTGTTGATAGTATTTGTTTCACAGTATGTGCCACATGTTCTACACAAGG GGAAACATATCTTTGATCGTTTCGCTGTTATATTTACAATTGTAATTGTATGGATATATGCTCATCTTCTCACTGTTGGA GGGGCCTATAACAATGCGGCACATAAGACACAAATATCCTGCCGCACTGATCGTGCTGGACTTATTGATAACGCTCCTTG GATTAGAGTTCCATACCCCTTTCAATGGGGAGCACCTTCATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCAGCTT TTGTTGCTCTTGTAGAGTCCACTGGAGCTTTCATTGCAGTATATAGGTATGCAAGTGCAACACCATTACCACCATCTATT CTTAGTCGTGGTATTGGTTGGCAGGGAGTTGGCATTCTGTTATCAGGATTGTTTGGAACAGTTACTGGATCTTCTGTATC CGTAGAAAATGCAGGTCTTTTGGCTCAGACCCGTGTTGGTAGTAGAAGAGTTGTGCAAATATCAGCTGGATTTATGATTT TCTTTTCGATTCTTGGAAAATTTGGAGCTGTTTTCGCCTCCATCCCAGCTCCCATTTTTGCTGCCCTGTACTGCTTGTTC TTCGCTTATGTCGGTGCCGGAGGAATTAGTTTTCTTCAGTTTTGCAACCTCAACAGCTTTAGAACAAAGTTCATATTAGG CTTCTCTATCTTCCTCGGCTTGTCTATACCACAGTACTTCAACGAGTACACGGCAATCAATGGCTTTGGTCCGGTCCACA CCGGCGCCAGATGGGTATGGATAATTATGCATATAACTATACATTGTTAG
Protein sequence (LotjaGi1g1v0183400.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGGGAPKSDEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHFLVMLGTTVLIPSALVPQMGGGNNEKARVIETLLFV AGINTLLQTLFGSRLPAVIGGSYTYVATTISIILAGRFSDEPDPIEKFKKIMRAIQGALIVASTLQIVLGFSGLWRNVAR FLSPLSAVPLVSLVGFGLYELGFPGVAKCIEIGLPELVLIVFVSQYVPHVLHKGKHIFDRFAVIFTIVIVWIYAHLLTVG GAYNNAAHKTQISCRTDRAGLIDNAPWIRVPYPFQWGAPSFDAGEAFAMMMAAFVALVESTGAFIAVYRYASATPLPPSI LSRGIGWQGVGILLSGLFGTVTGSSVSVENAGLLAQTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIFAALYCLF FAYVGAGGISFLQFCNLNSFRTKFILGFSIFLGLSIPQYFNEYTAINGFGPVHTGARWVWIIMHITIHC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 37 | 37 | - | – | |
| MobiDBLite | 1 | 24 | 24 | - | – | |
| PANTHER | 6 | 463 | 458 | 1.9E-273 | – | |
| PANTHER | 6 | 463 | 458 | 1.9E-273 | – | |
| Pfam | 36 | 440 | 405 | 9.2E-71 | ||
| TMHMM | 38 | 60 | 23 | - | – | |
| Phobius | 38 | 61 | 24 | - | – | |
| Phobius | 62 | 72 | 11 | - | – | |
| TMHMM | 73 | 92 | 20 | - | – | |
| Phobius | 73 | 91 | 19 | - | – | |
| Phobius | 92 | 96 | 5 | - | – | |
| TMHMM | 97 | 116 | 20 | - | – | |
| Phobius | 97 | 116 | 20 | - | – | |
| Phobius | 117 | 136 | 20 | - | – | |
| TMHMM | 137 | 156 | 20 | - | – | |
| Phobius | 137 | 155 | 19 | - | – | |
| Phobius | 156 | 160 | 5 | - | – | |
| TMHMM | 161 | 183 | 23 | - | – | |
| Phobius | 161 | 181 | 21 | - | – | |
| Phobius | 182 | 192 | 11 | - | – | |
| Phobius | 193 | 211 | 19 | - | – | |
| Phobius | 212 | 222 | 11 | - | – | |
| TMHMM | 221 | 243 | 23 | - | – | |
| Phobius | 223 | 243 | 21 | - | – | |
| Phobius | 244 | 285 | 42 | - | – | |
| TMHMM | 286 | 308 | 23 | - | – | |
| Phobius | 286 | 311 | 26 | - | – | |
| Phobius | 312 | 330 | 19 | - | – | |
| Phobius | 331 | 355 | 25 | - | – | |
| Phobius | 356 | 366 | 11 | - | – | |
| TMHMM | 364 | 386 | 23 | - | – | |
| Phobius | 367 | 386 | 20 | - | – | |
| Phobius | 387 | 391 | 5 | - | – | |
| TMHMM | 390 | 412 | 23 | - | – | |
| Phobius | 392 | 412 | 21 | - | – | |
| Phobius | 413 | 423 | 11 | - | – | |
| Phobius | 424 | 440 | 17 | - | – | |
| TMHMM | 424 | 446 | 23 | - | – | |
| Phobius | 441 | 469 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0183400.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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