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LotjaGi1g1v0184900.1

Overview

Field Value
Gene ID LotjaGi1g1v0184900
Transcript ID LotjaGi1g1v0184900.1
Lotus japonicus genome version Gifu v1.2
Description Enhanced disease susceptibility 1 protein; TAIR: AT3G48090.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9XF23|EDS1L_ARATH Protein EDS1L; TrEMBL-Plants: tr|A0A072V056|A0A072V056_MEDTR Enhanced disease susceptibility protein; Found in the gene: LotjaGi1g1v0184900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:36179223..36184248) extracted from Lotus japonicus Gifu genome v1.2.

AACAAAATGGGCCTATTTGGGATTGTAACATTTAGCATTGAGTTAATTTTCTTATTAACTTTTTCCCGGTCATGTAACTC TGTTGATACGCTAGAATATCTCTATCAAAGTAAAATGTTGAAAAAATTGAATTTGTTCTATCAAAGTAAATGGAGATTTA GAGCATACAGTCTGTCTACCTTTTGTATTTTGGATTTCAGTATTGTACTTTTGGTAGTCAGAGTTGTTTTTCTTCTTCTT TGTGTCTGCCATGTTTTCTGATGGAGTAGAGCATACTAGCTTGTGATGTAATGTGTATTTGTGATACTATATTGTAGTGC TCTATCTAGAGTTTGATTCCTTTCATTTGTAAGTGTGGTTTGACTTGACTTATGCCTTAATCTTAATCTTAGGACACCTG ACATGGTAGGTTTGTGTCAAACACCCTTATAATTTCAGTAATTTCTTAAGTACAAAACACAAGAACAAAATATTCTGAAG ACCCTGATCCTTTCAGACAGAAAGTATATACCAATATGGGTTTCAGGGAAAATGTGACTGACCTTCCAAGCCCACACCCC AATATCACTGCAGACACTTGTCCTGTTTCTATTGGAAGTTCCCCACTTATATTCCAATTTGCAAGTCAACTTGCACAAAG CCTTCGTCAACAATTCTTTATTCATAACAACCATCTCCATGTGGAGCAACTCATCACACACAGATCAAGCTTCCAAAGTC CAACAAGCAAGAAACTGAGAAGCAAGCAGGGAAGAACTGAGACTCATGGCTGCAGGTGAGGGCATAGAAATGAAAGCAGA TCAGATTGAGAAGGCATTTTCTACTGCCTGGAAGGCTCACAAGTCACCAGAAAAGCATTACCTTGTTGAAAAGAACACCA GAGTCAACCCTTCAGAAGTCATCATCAGCTTTCCAGCATCAGGTTCTGTCAAGGATTGGTATTCTGGAACAACCTTTGGG GAAACCAAAATAGATCTTAAACTATTTCCCTCACTTAAAAGCATTGGAAACAATGAAGCTGCTAAAGTCAATGAAGCCTT TCTGAAAAGATTCCAAGACATTCTGGACAAATCCGCATTTAAAGATGAGGTAACAACTCTCTTACCAATAATTACTTAGC TCTATTCACTTTATGTGTTTCTTTCCTTTAATACAACCTTAGCATCAATTACACTGCCTGTAGCATAGATCTGCTGGATT TGTTAGATAAGTAACTAATGCTAATAAATTGAAAAATGACATTATGAGTGTTCAATTTATAGTTGATTTTATCACAATGC TACCTCATATAACTTATGCACATGCACCATATTTGGATTAACTTCTATTTCTAACTATTCAAAATCAATTCTGACATTCA AAAGCTACTCATAGAAGCTTCTTCCAAAAATTGACTTTACTTTTAATTAAATTGTAGAAGAATTTCCAAACATACACTTA TACGAACTTTTTCTACGTTAGAAATAAATTTCTTATCTCCGAATTAGGAACATAGAGTCATTCAATAGGATCAAAGATAA GAGGAACTGTAGAGAAAAAGTATCTAAACAAGTAATCATTCATCATGAAAAAGATGCTGAAATAACACTAAGTGATTGTT ATTTATACAAAAGGTTACCATAGAGCAAAGTAATTAACTAGTAACCATAACTAACTAACCACCTAAGTAAGAAACTAACT AAATCAATATTTCTAATACTCAAAACTGAAGTAGGCCATAAGCTAAAAGTTTATCCAAACTTGGCCATTGTCATTATCAG ATGGTATGCAGTTATGGGTTTCCTACTTTCCTTTATCTAATGAAGCATATATATGAATGAATCTGCAGGTAGACAAAGCA ATGAGCAAACAAAAGAAAATAGTGTTTACAGGACACTCCTCTGGTGCTCCAATGGCCATTCTTGCATCCCTCTGGACCTT GGAGAAGTACCTAACACCAAAATCTCATAGAGAGATCCCTCTCCTCTGTGTAACTTCCGGTTCTCCCTTAGTTGGCAATC ACATATTTTCTCACGCCACTGCGCGAGAAAACTGGTCTCGCTATTTCTTTCATTTTGTCATGAAGCATGACATAGTGCCA AGAATTCTCCTTGCTCCTCTCTCTTCCTTGGACCAAAGCCTTGAACCAGTTTCACAGTTCTTCAACCCCAAATCCAAATC TTTCATGAACGAGTCCATTGGAAGAGTTACAGAAGCTTCAGATTTCTACTTTGCCGTGATGTCAAGTGCTGCATCTGTCA CGAGCCATGCTGCGTGCAAGCTAATGGGCACGACGGATGCAGCACTTGAAACACTGGCAAATTTTTTTCCAATGAGCCCT TACAGGCCCTTTGGAACTTACATTTTCTGCATTGCAAATGGAAAGGAAGCAAAGCAAATTGTCGTAAGAAACCCAGATGC GGTTCTGCAGCTCTTGTTTTTCTCTGCTCAGATAAACACTGAAACTGAAGCTGATCAAGTTCCCTATAGAAGCCTGCGAG AACATGTCATCAATGATACTGAACTGCAACAAACGTTAAGAATGCAGAATGTTGTGTACTTGGATCAACTGGGGAAGCTT CCTTTGCCTGAGGATAGTTCAAGTGGTGACACTGCAGAGATTAACATGGCCTTAAATGACCTTGGCCTGGTAAGTAACAT TTCCTGCTATTGTATTCACCATAACCACTTACATTCCTTCCAATGAAAGAAAAAGTTCTTGGCCAAAACAACTATATATG CTATAGGGAAAAAGAAATAGACAATTTCAAGTTCATTTCTTTACCTTGTTATCATGGATATAATACAATTATGTACTTGC TCTACATTAACCAATTGCATGAAATGAATCTACAATTATAATAAGATCAAATGATAAAATTTTAGCTAACCATTTATTCC TTAAACCATTGAACATCAAATAGTTAGATTCATGTCTAAACCTAACATAATCACTTCACCACCACAAAATTGAACTCTTA GTAACTTCTTTCAGAACTTCTCCTCAAAACGTGGAAACCTACCAGGTTTGTAAGCACATTATAATTCAATGTTTGCAATG TTATAACTAATTCTCCATTGTCAGAATCAATCAGTTTTTGCCTGTTTAGGCATCTCCTTTCATAATTGGTTTGAACTCCA AAATCGATTATGAGATTAGATTCTGCAGTGGGCATGATCTATTATAGGATTTAATGACTGTATTTCATAAAATTAAAAAA GGACAGCCCGCTGCATCAAAGCCTATGTGCAGTGTCAGGGAAGGATCCGATCACTTGATCTATCGTACTTAGACTTATCC TGATTTTTTACACAAGAGGTTATTTCCATGACCTCAGTCGCATAGCAATAACTTTTTATTGTTGTGCCAAGGCTCAATTT CATAAGATTATTCACTTCACTTTTAAGTCACTTTTATCACTATCCATTTCATCAAAATCAATTAAGGGTGATCCAAACAT TGATCATATATATGTGATTATTCCCTGTATGCAATTCCAGAGCACAAGAGCAAGACTGTGCCTTCGAGCAGCAGGGGAGT CAGAGGCAAGGAAACGGGACAACGAGGAAGTAATAAAAAAGAAGAAAGCCTTTGTTGAGGAAAGAATGAAGAAACTGGAT GAGTACAGAGAAACAAAGTCACTCCAGAAAGTAGGGTACTACGACAGCTTCAAGATCCAAGATGACATAGAGGACTTCTC AGCAAACGTGACGAGGCTAGAGCTTGCAGGGGTGTGGGATGAGATAATTGAAAAGCTAAGAAGTTACGAACTCCCAGACG AGTTCGAAGGCAACAAATATTGGATAGAGCAAGGAACAAGGTTTCGCCGACTCGTGGAGCCGCTGGACATAGCTAACTAC TACCGCCACCCGAGGGAAGGGGCTTACATGGATAAGGGAAGGCCAAGACGTTACAGGTACGCATTTATGATACGTAGACA CTAAGCAGTATAAAAAACACCCTACAAATAGTTATGATACAACTCCTTTTGCTTTCTCGTATATCTCTCTTCTTATCACA TCATGACACATTCGTTACTTCTCTCATATCTGCATTTCTCGCTCTTCTAACTCTTGGTGTCTACACTCATTACGTGGCTA CCCAACATTTTCCAGGTACGCGCAGAGGTGGTTGGAGCATTCGCAGGGGAGAACGGAGGAAGCTATCTCGGAGTCTTGCT TCTGGGCTGAGGTGGAGGATCTTTGGAACATGGCAACAAGTGACAAGAAATGTTCTTTTGAGAATGTAAAGGAAAGGGTT GTGAGAGTAGAGGAGCAGATAAGAGTATGGATTGGGAAGGGTGAATTAGGTAACGATGTGTTCTTGGAGGGTTCTACCTT GGTGAAGTGGTGGAAGTTTCTGCCTTGGCAGCACAAGCAATATTCATGCATTAGAAGTCTTGTTGAACCATGAATAGAGA CAAGCATGTGCTAGTGCATTGAGGGTGTGAGCTAATTTTTATTATTATCTTTGTTCAGTTTTGTAATGGAAAATGGTTGG TATGATGTAGACCAATAATGACATATACACACCTCATTTTTAAACACTTTATTTCCGCCTCTTTTTATTTATATCTCTCC CCTAATTATCTATCACATCTCATACTTTCTCTCTCTTACTTTTTCGTCAGCGTCGTTTGCAGAATCATCAAATATTAAAC GGAACCTCACGGTAGGAGCTTATCACTATATATTATTTTCTCATTATGGGCTTATTCCACCCAAAAAAATTTGTAGGGGC CTTAACCAAATGACCCATATTTTAGAGGGACCTCCAACATATTTAAGCCAAAAAAAATAATGAATATTATATATAATGTG ATGTGAAAAGAAGTTGGGAAATAAAGAGAAAAATTCAAGTGTTTGATGGGTGTTTCCAGTGGGATCTCGATCCTCTCTTG TGGAACTCCCTCCCGCGCTCTTTGCAGCAGATAGAATATTGTTTCTTTCACATCTCTAAGAGAGGTGGAATGGGGAGAGA GATATGAAGAAAAGAAAAAGTAAGAGAGAAAAAGTATGAAATATGATAAATGGTAAGAGTAGAGAG 

CDS sequence (LotjaGi1g1v0184900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTGCAGGTGAGGGCATAGAAATGAAAGCAGATCAGATTGAGAAGGCATTTTCTACTGCCTGGAAGGCTCACAAGTC ACCAGAAAAGCATTACCTTGTTGAAAAGAACACCAGAGTCAACCCTTCAGAAGTCATCATCAGCTTTCCAGCATCAGGTT CTGTCAAGGATTGGTATTCTGGAACAACCTTTGGGGAAACCAAAATAGATCTTAAACTATTTCCCTCACTTAAAAGCATT GGAAACAATGAAGCTGCTAAAGTCAATGAAGCCTTTCTGAAAAGATTCCAAGACATTCTGGACAAATCCGCATTTAAAGA TGAGGTAGACAAAGCAATGAGCAAACAAAAGAAAATAGTGTTTACAGGACACTCCTCTGGTGCTCCAATGGCCATTCTTG CATCCCTCTGGACCTTGGAGAAGTACCTAACACCAAAATCTCATAGAGAGATCCCTCTCCTCTGTGTAACTTCCGGTTCT CCCTTAGTTGGCAATCACATATTTTCTCACGCCACTGCGCGAGAAAACTGGTCTCGCTATTTCTTTCATTTTGTCATGAA GCATGACATAGTGCCAAGAATTCTCCTTGCTCCTCTCTCTTCCTTGGACCAAAGCCTTGAACCAGTTTCACAGTTCTTCA ACCCCAAATCCAAATCTTTCATGAACGAGTCCATTGGAAGAGTTACAGAAGCTTCAGATTTCTACTTTGCCGTGATGTCA AGTGCTGCATCTGTCACGAGCCATGCTGCGTGCAAGCTAATGGGCACGACGGATGCAGCACTTGAAACACTGGCAAATTT TTTTCCAATGAGCCCTTACAGGCCCTTTGGAACTTACATTTTCTGCATTGCAAATGGAAAGGAAGCAAAGCAAATTGTCG TAAGAAACCCAGATGCGGTTCTGCAGCTCTTGTTTTTCTCTGCTCAGATAAACACTGAAACTGAAGCTGATCAAGTTCCC TATAGAAGCCTGCGAGAACATGTCATCAATGATACTGAACTGCAACAAACGTTAAGAATGCAGAATGTTGTGTACTTGGA TCAACTGGGGAAGCTTCCTTTGCCTGAGGATAGTTCAAGTGGTGACACTGCAGAGATTAACATGGCCTTAAATGACCTTG GCCTGAGCACAAGAGCAAGACTGTGCCTTCGAGCAGCAGGGGAGTCAGAGGCAAGGAAACGGGACAACGAGGAAGTAATA AAAAAGAAGAAAGCCTTTGTTGAGGAAAGAATGAAGAAACTGGATGAGTACAGAGAAACAAAGTCACTCCAGAAAGTAGG GTACTACGACAGCTTCAAGATCCAAGATGACATAGAGGACTTCTCAGCAAACGTGACGAGGCTAGAGCTTGCAGGGGTGT GGGATGAGATAATTGAAAAGCTAAGAAGTTACGAACTCCCAGACGAGTTCGAAGGCAACAAATATTGGATAGAGCAAGGA ACAAGGTTTCGCCGACTCGTGGAGCCGCTGGACATAGCTAACTACTACCGCCACCCGAGGGAAGGGGCTTACATGGATAA GGGAAGGCCAAGACGTTACAGGTACGCGCAGAGGTGGTTGGAGCATTCGCAGGGGAGAACGGAGGAAGCTATCTCGGAGT CTTGCTTCTGGGCTGAGGTGGAGGATCTTTGGAACATGGCAACAAGTGACAAGAAATGTTCTTTTGAGAATGTAAAGGAA AGGGTTGTGAGAGTAGAGGAGCAGATAAGAGTATGGATTGGGAAGGGTGAATTAGGTAACGATGTGTTCTTGGAGGGTTC TACCTTGGTGAAGTGGTGGAAGTTTCTGCCTTGGCAGCACAAGCAATATTCATGCATTAGAAGTCTTGTTGAACCATGA 

Protein sequence (LotjaGi1g1v0184900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAAGEGIEMKADQIEKAFSTAWKAHKSPEKHYLVEKNTRVNPSEVIISFPASGSVKDWYSGTTFGETKIDLKLFPSLKSI GNNEAAKVNEAFLKRFQDILDKSAFKDEVDKAMSKQKKIVFTGHSSGAPMAILASLWTLEKYLTPKSHREIPLLCVTSGS PLVGNHIFSHATARENWSRYFFHFVMKHDIVPRILLAPLSSLDQSLEPVSQFFNPKSKSFMNESIGRVTEASDFYFAVMS SAASVTSHAACKLMGTTDAALETLANFFPMSPYRPFGTYIFCIANGKEAKQIVVRNPDAVLQLLFFSAQINTETEADQVP YRSLREHVINDTELQQTLRMQNVVYLDQLGKLPLPEDSSSGDTAEINMALNDLGLSTRARLCLRAAGESEARKRDNEEVI KKKKAFVEERMKKLDEYRETKSLQKVGYYDSFKIQDDIEDFSANVTRLELAGVWDEIIEKLRSYELPDEFEGNKYWIEQG TRFRRLVEPLDIANYYRHPREGAYMDKGRPRRYRYAQRWLEHSQGRTEEAISESCFWAEVEDLWNMATSDKKCSFENVKE RVVRVEEQIRVWIGKGELGNDVFLEGSTLVKWWKFLPWQHKQYSCIRSLVEP 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D 7 242 236 5.4E-21
PANTHER 8 611 604 0.0
PANTHER 8 611 604 0.0
SUPERFAMILY 41 198 158 3.51E-19
Pfam 48 194 147 8.9E-20
Pfam 416 522 107 7.0E-35

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Lipid metabolic process The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0184900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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