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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0188200 |
| Transcript ID | LotjaGi1g1v0188200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial carrier protein, expressed; TAIR: AT1G74240.1 Mitochondrial substrate carrier family protein; Swiss-Prot: sp|Q03829|YM39_YEAST Uncharacterized mitochondrial carrier YMR166C; TrEMBL-Plants: tr|G7IZA2|G7IZA2_MEDTR Substrate carrier family protein; Found in the gene: LotjaGi1g1v0188200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:36917127..36923528) extracted from Lotus japonicus Gifu genome v1.2.
ATTATTCTTAAGCTAAATTAAAGTAAAACCCTAGACCAAACGAAGTTGCTGTTACTTTTCTCCATGGCTGTTCAGAGCTC CATTTCCAGCGAAGCGCAAGCTTCAAAAAGCGATTCTCATGGCCATTTCTTTGGTAAGCCACTGATTCATTCTATGGAGA ATCACAATTGCATTCATTTTCCGCATTCCAACGATGGGTGTATTCATATGAATGAATTATTTCTTTTTTGCTTTCAGCAT TTGAAATTTCGGAACAGAGGGTGCAAAATTTCACCTCCATTGCCATTTTAGTGCCAATATTTGGATACTTGTTATTTGTT AAGTTCAAAAGCTTTGGATTTTCTTTTTGAAATGAATTTTGAACCTTTTCTTTGTTGCTGCATTTGTAGTTATTTGAAAT TGAAGGGATGTTTGTTGTAATAATATGCAAATTAAGACCAAGTGATGTGATCACGTGATATCATGAAATGAACCCAAGTG TATGCTTATGGTTCATTTTTCCCAATTTGATGAAAAGAAATCGAGTAGATGAATTTAAATGTGCTTGTTTGAGTCAATAG TCATGACATTAGCATACAGTGTCTGATTGTGCTTGTGTTTTTATGTGTGGATCGAGATTTTGTTATTCACTGGAAGGGTA CTTGAATGAGATCCAATATTATGGCATATCAGTGGGAACTTTTTTTGGCACCCATTTTTTCAATACACCCCACCAAAACT TGCTTCTGGAAATTCATTTCCGGTAATAATTGTGTTCTGGAAATTAGTTTACAGAATAAAAGGGGGCGGTGAGAGTTGAA AAAAGAGTGTTAAAGAAATTCCCCACAAAATACCTCCCCAAAAAGCTACCGGTAATAATTGTATTCCAGAAATTAGTTTA CAGAAGCTAGCTTTTACTCCCCAAAATAAGCTGTTCTAAATACGTAGACAAATACGGTATGTGTAGACTGAGCTAGATTG TGTTGTATATTTAGGTTTTGGTTGGGTCCTAGTACAAGCATGCATGAAAGTAGAACCCTTTATTTTGTGACACAACATAT CTCTTTGCAATATGCACCTTCTATCCAACAATCTCCTTCTCCTCTCTCATTCATCCCTCTCAAACAAAGGCTACGGTCAC TAGTAAATTGTTCGATAACAATGTTTTCCAGCATGTGTGATGTAGTTAGTTTTGGTTAATATGGGTTCTTGGCTGGTAAA AAAGGGGCGTGGTTTGCTGCTGGAATTCGCCGAGATTGGGTAGCAGGGGCTGCCATCATCTTTCGCCATGGCAAGGATTT TGGCTTGCGTGTCTAAGTTGATTGAAACTTGTAGAAGGGTGGGGCAAGTGCTTTAATAATTATTTTCTGTTGCAGGCGGT GCCCCTTGGTCTATTTGTTTTGCAATTTTAGTTGTTTTAATTTAGTAGCTTGTTTTAGTTCAGTAGCTTCTTACTTCAAT TTGTTTATTTTGTTCTTTTTGTTGCATTTGGGTGAAGCAGCCCTTGTTCTTTTGATTAATGGAATTTTGGCTTATAGAAA AACAACGACAATGTTTTTCCTTTTTTAAATTTATAATTGAATAACATTTTCTTATATTATGATATTGTTGAAGTATGGAG AGAATTTGTTTGGGGAGCTGTTGCGGGTGCTTTTGGGGAAGGAATTATGCATCCGGTAGATACTGTTAAAACACGGATAC AAAGTCAAGCTATTCTAAATAGAATTGAGGTATGATTGCAACCTGTATATAAAATACACAGTATTTTCATTGATAGTTGT TGATAAATTGAATAAAGCTTTTCTCCTTCATTTGGAACACCATTTGTCTATTAGAACCAGAAAGGCATATTGCAGATGGT GCGGTCTGTCTGGCAAGTTGATGGATTAAGAGGTACACATTTTAATTATTTAATATTTTTGTCCCTCTGATGCTCAGGGA ATTTCCTCATGTTAAAGTCACATTTAGTGCGTGTTTGGATTGACTTGCTCTGCTTTCAGAAAAGCATACAATCCAAATGT TTAAGAGAGCTGCATTGAAGTAGATGGCTGATAGCTTCAATCTAACATTTGTTTTTTTCTCGATTTAAACTTATTATGAA TCTTATAGTTTTCACTTTGGACTTCAAACTTAAAAATTGTTTCCCTTGTGATTAATTTGAGATTTCGTAGGGTTTTACAG GGGTGTACTACCTGGTATTACGGGGTCTCTAGCAACTGGTGCAACATATTTTGGTGTCATAGAGTCCACTAAAAACTGGA TTGAGGATTCACATCCGAGCCTTAGGGGCCACTGGGCACATTTCATTGCAGGAGCTGTTGGTAAGATGATCTGTAGCATC TAATCGTAATATTTGTGTATTTTTTAAGTTCTAGAAGTTATGCATTTTGACTCCCTAAAGGGCATTGTAGTAGCTGTCAG AATATACCAATAATGTTTCCCCTATTATCTAATATTAACCTTTTTCCCTTCTGATGCACTGCCCATTTTATTTTTGTGTT CGGTATTTCCTAAGCAAGTTATGGTACATTGTCTTCACTCTTCATTACATATTACACATATTTACATAATGTCGTGCTGC CCTCGACATTTTTATTATTGCTAAATTTTGAATGTTTTTTAAGCATCGTGTCTATAACCATTTGAAGGTACAACAAAGGA CTTAAATCTACCTTATTTCTCTGTATTTCAGGAGATACTCTCGGTTCTATTGTGTATGTTCCTTGCGAAGTGATAAAACA GCGTATGCAAGTTCAAGGAACAATTAAATCTTGGAGTTCCATTGCAAGGGAAAATGGCGCTGCAATAAAGCCTGGGTCAC AAATATATAGTTATTATACAGGGATGTTCCATGCAGGCTGCTCAATATGGAAAACACATGGCCTCAAGGGCTTATATGCA GGGTATACGCTAGATGCAATTATTCAATTCACTAATACTGAATTCCTTTTTGATTTGATAGAGTTTGTGGAAGCACAACA CTAAATAGTATCCTAGGAACAATAAGGCATCATTTTCACGATTAATTGGCTTTCTTGTATAGGCAATATGTGATAAGATT TTACTTCATGAACAGATAGTGAGATGTAAAATGAATCTGTGAATATTGGATAATGCTAAGTTAAATGAATCATTATATTT CCTAAAGATCCACACCAATTTACTGTACTATTTATAGACTGCCATTTAACCAATTAAACCAGTTGGATCATATATATCTG ATCTAATAGTCAAAATTTATTTATAATTTTAAAAATTTAATAAATGTCAAAATAAAATAATTGAATGAGGTATCAACTAG TTTTAAAATCATATGAACATTTATGAGCTTGATTCACTTTATCAAAACTTTCAACTTAAGAGTTGAGTTGATGAAATTCG ATGTTAATAAAAATTAATTTGTGCAGTGTGTCAAGATTGTTTCATAGAGCGAGCAGATCCTCACCCATATATAATATATG AATTCATAATGAACCAATTATTAAATTCTGAACATGTCTCTAATGCATGATTTTTCTTGCTTCTGCAGATATTTGTCTAC ACTGGCGAGGGACATTCCATTTGCTGGCCTAATGGTATAACCCAGAGTTTTACTAGAATCACTCTTATAGTTATGTTCAT CTTTTGTTAATTAATTTTAAATATTTGCTTCATTGGTCCTTCTTCATTTTGATTTAAGAGCCTGTTGTGTGGTACATGCT TAATTCCCCTTAAGAAAAGTCTCGGGCTCGAGTCTTGTGAATGGAAAAACCCCGTTGAGAGAGCTAGTCCTATCATGATA TGGATGTTCCCCGATCGAACATGATTGCGTATATAACACACACACACACAAAACCATTGTGTGGTGTGACTAAGGCATCT TCGGCCTTGTCATGCTCTAGTAGTTTTCTCATATAAACCTTAAATGGGCTAGGACAATCATGTCAAGTAACCGCTTATCC CAAAAGCTTAAGCTGTTAGGTAAGGGCCACTTTAATGGTTTTATATTATATTCTAACACGCCCCCTCACGCAAGAGCCCT TTGGGCTTGAAGCGTGGATAAATGCACAGGCCCACCTACCATGTGCTTAATTAAATTCCACTTTTTAATTAGAAAGTGAG GGGAGCATGGATCGAATTCTAGACCTTTCGGTCATAGAGGCTCTGATACCATGTCAAGTAACCGCTTATCCCAAAAGCTT AAGCTGTTAGGTAAGGGCCACTTTAATGGTTTTATATTATATTCTAACAAATCAGAAATTTTAACTAAGGAATATCTTTA TATTGGCATTGACATAGAGATTGGAGAGAAAGGACGCATTTTTTATATTCAGAGTTGAAGTATATTCTTCATAAAGCTAA TATGAGAAGGTAGTCTTATGAGCTTATCATCGGTATCTTTTTGTGTTGATTCTCTTCACTCTTGGATCCGGTTTATTAAT TCCCCTGCCACACCTGCAATTGTTTAAGCTGTAATTAAATAATCATGTTTTAAACCTCGAAAGCGTAGTACTTTCAAAAA CCTAGGAGAATAGTTGTAGCAAATGTTCTGGTACTAAATCATAGTTTACATCCTGTTTATTGGAATCCAAAGTAAAGATA ATAAAATGATTTCTTTCATGAAATTGTTTCAGGTTGATTAATGTAAGATTCATTTAAGTTCATATACAAATCAAATTAGG TGACAATTCATTATTTTAAAATCCTAACAGGATTTCTGTTCGGTTATAAAGTGAAAGTAGTTATCTAAACACTGCATTCA TGTTATATGTACTCAACTCTTGTGTCATCATAGAATTTATGTAATATGTGGAGAAATTATGTTTCTAGAAGGCAATGTTG TCAAGTAGCCGATATAGTGGTGCTATAGCGCTATAGCGTAACGCTCTGAGGGCTCACTGCTATCCGCTATTTGCCGCTCT GAGGGCTTGACATGGCGGATTTCTAGCTTTCCGCTGTTTTTCGTGATCCGTGATTAACAACACTGCTAGAAGGTAATTAC TTGAGCCTTACAAAAGGCTTCAAAGTAACACCAATGTCTAATTGTTGATAGCTTAACTCTTACTTGTTTTCCATGCAACT AAAAATGGTGGATAATTTAATTGAAGAATTTTTCTGCCAGCATGGGCTTGGATACGGTTCTGTATTCAGTCCCAGCTTTG TAATATAGTGCTAATAATTTTTTCTTTTGAATAATGTTATATACACGCTTTTTCTTTCTTTTTAGGTCGTGTTCTATGAA GGTTTGAAAGATGTCACGGAGTATGGGAAGCAAAAATGGACATCCAGTCCAAATTGGCAAATTAGTAATTCGCTCGAGGG ACTAGTTCTAGGAGGATTAGCCGGTGGTATGTACTGTGCTTTGCCTTCAATCCTAAGCATTGCAGTGTTCCAAGCAGTAA ATTAATTTTTGATCCAAATAATTAAACAGGCCTGAGTGCATATCTCACTACTCCTTTGGATGTCGTCAAAACAAGGCTGC AAGTGCAGGGATCAACTTTAAGGTATCATTTTCTTTTCACTAACTATTCTAACAGGTTGTGGATATGCGTGATTTGTACC TACCTCTAGAATACTGCTATGTTTTCTTAATTGTTTGTTATGTGGAACTCATTTGCTTGGGCATCATGCAGAGTTGATTT TCTAGTATATAATGGGCATCTACGGAATAATAATTTGTGATATGATATACCTTGTCTCGTTTCTTTGTATCATTCATGTT TCTGATGGACTAAGCTAAATTGATGATAATTGGCTTTCTTTTATGATATTAGGTATAGTGGCTGGTTGGATGCAATTCAC AATGTATGGGCTAGGGAAGGGATGAAGGGGATGTTTAGGGGTAGCATCCCCAGGATTACATGGTACATTCCGGCTTCTGC GCTAACATTCATGGCTGTGGAATTTCTCAGAGATCATTATAATGAAAAAGCGCCCCGTTATGATTCACGAGATGCTACCA GATTATCAGTATCCAAGAAAAAATCTCTGCAGGAGGTTGCTTAAAAGTTCTGATTGAGCTCATTGCTTCCCATATTTATT TTTACAAAGATGGGGGGTTTGTATATATCAAAATTGTTACTCACATTCCCATTGTTGTCAACATGCTATGACATGAAAAT TATGCGCTTATCAACAAAAAAAAAACATGAAAATTATGCTTTGAATATTATTGGTTTTGATACTTGAGATATATGTAAGA ATGTTCAAATAATCATCATGCTAATAATTGCAGCATTTAATATATAATAGGCTTTGAATATTCCAATAGTACCATGAGGG TTGGGGTTTTCTTTCTTTTGTTTATTGACTTGGATCTGGTGGTACAGGTATTTGGTTTGCCGGCTTTTTTCCTTTGGAGG GTTATGGATTTCCCCCCCCTTTGTTGGTCGGTTTTTACTAGGTCTCTAATCATTTTTTGGTTTTCCAAAAAAAAAAACAA AG
CDS sequence (LotjaGi1g1v0188200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTTCAGAGCTCCATTTCCAGCGAAGCGCAAGCTTCAAAAAGCGATTCTCATGGCCATTTCTTTGTATGGAGAGA ATTTGTTTGGGGAGCTGTTGCGGGTGCTTTTGGGGAAGGAATTATGCATCCGGTAGATACTGTTAAAACACGGATACAAA GTCAAGCTATTCTAAATAGAATTGAGAACCAGAAAGGCATATTGCAGATGGTGCGGTCTGTCTGGCAAGTTGATGGATTA AGAGGGTTTTACAGGGGTGTACTACCTGGTATTACGGGGTCTCTAGCAACTGGTGCAACATATTTTGGTGTCATAGAGTC CACTAAAAACTGGATTGAGGATTCACATCCGAGCCTTAGGGGCCACTGGGCACATTTCATTGCAGGAGCTGTTGGAGATA CTCTCGGTTCTATTGTGTATGTTCCTTGCGAAGTGATAAAACAGCGTATGCAAGTTCAAGGAACAATTAAATCTTGGAGT TCCATTGCAAGGGAAAATGGCGCTGCAATAAAGCCTGGGTCACAAATATATAGTTATTATACAGGGATGTTCCATGCAGG CTGCTCAATATGGAAAACACATGGCCTCAAGGGCTTATATGCAGGATATTTGTCTACACTGGCGAGGGACATTCCATTTG CTGGCCTAATGGTCGTGTTCTATGAAGGTTTGAAAGATGTCACGGAGTATGGGAAGCAAAAATGGACATCCAGTCCAAAT TGGCAAATTAGTAATTCGCTCGAGGGACTAGTTCTAGGAGGATTAGCCGGTGGCCTGAGTGCATATCTCACTACTCCTTT GGATGTCGTCAAAACAAGGCTGCAAGTGCAGGGATCAACTTTAAGGTATAGTGGCTGGTTGGATGCAATTCACAATGTAT GGGCTAGGGAAGGGATGAAGGGGATGTTTAGGGGTAGCATCCCCAGGATTACATGGTACATTCCGGCTTCTGCGCTAACA TTCATGGCTGTGGAATTTCTCAGAGATCATTATAATGAAAAAGCGCCCCGTTATGATTCACGAGATGCTACCAGATTATC AGTATCCAAGAAAAAATCTCTGCAGGAGGTTGCTTAA
Protein sequence (LotjaGi1g1v0188200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVQSSISSEAQASKSDSHGHFFVWREFVWGAVAGAFGEGIMHPVDTVKTRIQSQAILNRIENQKGILQMVRSVWQVDGL RGFYRGVLPGITGSLATGATYFGVIESTKNWIEDSHPSLRGHWAHFIAGAVGDTLGSIVYVPCEVIKQRMQVQGTIKSWS SIARENGAAIKPGSQIYSYYTGMFHAGCSIWKTHGLKGLYAGYLSTLARDIPFAGLMVVFYEGLKDVTEYGKQKWTSSPN WQISNSLEGLVLGGLAGGLSAYLTTPLDVVKTRLQVQGSTLRYSGWLDAIHNVWAREGMKGMFRGSIPRITWYIPASALT FMAVEFLRDHYNEKAPRYDSRDATRLSVSKKKSLQEVA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 309 | 309 | - | – | |
| Gene3D | 2 | 167 | 166 | 1.3E-35 | ||
| PANTHER | 9 | 347 | 339 | 9.6E-185 | – | |
| PANTHER | 9 | 347 | 339 | 9.6E-185 | – | |
| ProSiteProfiles | 22 | 111 | 90 | 21.054 | ||
| Pfam | 23 | 114 | 92 | 1.4E-21 | ||
| SUPERFAMILY | 23 | 327 | 305 | 2.48E-73 | ||
| PRINTS | 27 | 40 | 14 | 7.1E-5 | ||
| PRINTS | 40 | 54 | 15 | 7.1E-5 | ||
| ProSiteProfiles | 120 | 227 | 108 | 18.973 | ||
| Pfam | 122 | 227 | 106 | 5.8E-18 | ||
| Gene3D | 168 | 349 | 182 | 6.5E-42 | ||
| PRINTS | 200 | 218 | 19 | 7.1E-5 | ||
| ProSiteProfiles | 244 | 330 | 87 | 23.8 | ||
| Pfam | 247 | 334 | 88 | 3.3E-24 | ||
| PRINTS | 253 | 275 | 23 | 7.1E-5 | ||
| Phobius | 310 | 327 | 18 | - | – | |
| Phobius | 328 | 358 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP transmembrane transporter activity | Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0188200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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