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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0196100 |
| Transcript ID | LotjaGi1g1v0196100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein IQ-DOMAIN 1; TAIR: AT3G49260.1 IQ-domain 21; Swiss-Prot: sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1; TrEMBL-Plants: tr|V7CTN4|V7CTN4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0196100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:39097074..39102481) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAAAGAGGGACAATTAGACAACTACACCATGACACAAAAGAGGCACCAAAATTGTTAATCTCATATTTTGATGCCAT TTTAATTAGAAATAAAATTGCAATTACATTTTTTCCCTTGATTAAGAGTTTGACATTGCCCCTAAAAAAAAAGAGTTTGA CATTAGATGATAATAACAAAAATAAGAGAGAGAAAAAATGAGGAGATTGATTGATTAGTGGGAAAGTAAAGCAGTTGAGA TCTGTTTTTATTGATCCCGGTTCAATAATATGAGCATCCGTGAGTTGAGAGCGTGTTCGTGCCTCCAATCCAACTGTATA ATAAATAAATACATGCATCCGTGACTTACATGAATAAATACCAACGACGATGGTTGCGCGGGCTTGCAGTTACTAATCTC ACGCGCTTCTTGATCTTCTCTCAACTCTGATGCATTTCAATTTACAATTTCCAATAATTCTACCCAACATGCACTTTTTT CCTATGTTTAATCTGGAAAATCAATTCAAAATGCGTGATCCGATCAATCCTCACTTGTGAAATAAGCAGATCATTTCATC ACAGATGGGGAAAAAAGGAGGAAGCTGGTTCTCGTCGGTGAGGAAAGTTTTCAAGTCATCATCATCATCATCATCTAAAG AGGAGAAGATCAAGGTGCATGATTAATTAATTTTAGCTTTAATACTTTCTTTCTTTTGTCTAAATTGTCATAGATCATTT TAATTCACAATTTGTTAGTCATAGACATTTCCACATCCATTAATTAGGAAAAACATAATTAATCTTGAAATTTGATTTTG CTATATAACTAATCAAATGCGTTTGGATTTAATTTTCAGAAGGAAATTAGCTGCAGGCATGAGGCGCCGGAAGTGGTTTC TTTTGAGCATTTTCCTGCAGAGAGTTCCATTGATGTCGACGACACAAACAACGAGGAGAGCATCACCACATCAACAACGC CTGTGACTGAAGATAGAGATCATGCCATTGCCGTTGCAGCAGCAACCGCCGAAGCGGCTGAAGCTGCTGTGGTGGCTGCT CAAGCTGCTGCTAGAGTTGTGAGATTGGCAGGTTATGGACGTCATTCCAAGGAAGAAAGAGCAGCAGCACTCATTCAATC ATACTACAGAGGATACCTTGTAAGGACTTCATCTATTCTTCTTCTTCTTGTTTTTGTTTTGAACAATTAATATAATCCTA TTTTAATTTAGCCGAACCTGTTTGGATGCAGATAAAAATTATTTATTAAAACTTATTTGGTGTTTTATTTAGGAAAAAAA GTCTAATTAATAACAAAACGCGCTATTTAGACTGTTCGACAATTTCTTCTACGAATTTCAGTAAAAAATGGGTTTATTTA ATATATTCTTCTTCTTTCGAAAAAAAAAGTTAATTTAATTACAACAAATTTTGATTATATGGATTCACTTAATATGAGCT CTTTTTTTTTGAGAAAAAAAGTAAGCTCCACCACCTTGGGCCTAATTTGGAAGAGTTTATTTGAACTTATCTGACAGCAT AAGCTCTTATACCAGTGTTTGGGAGGGCTTATGCAAACAGCTTATGACCTGCCATAAGCTATTTTCAGCTTATTTTCATA AGCTACTCAGGATAGCTTATGAAAAACAGCTTATGCTTATATACAACTTATTTTTAATTTATTTCAATAAATTTTCAAAA ATAGCTTATGAATAAGCGCTTATATGTCATAAGCGTTTATGACCATAAGTGTTTAATTAAGCTGTTTTTCCAAACGGGGC CCAAGTCACCTATCTTCTCATCCCTGTAAAAACCTGAAAGAAAAATGCACATTATTAGAGCATCTCCAATGCTAGGTTTT GAAGTCTTAGCATTATTCATGTGGGCCTGTTTTGCCACATGCGCGTAAGTAACTCTTTGCAGATTTTCCTTCAACTATGA GTTCTTAGCACTATTCATCTGATCCCACAATAGCATTATAGTAATAAAAAAAAATTTGTTTTTATATAATTTTGATTTAA ATTTAAATGCTAATTCGATACTTAAATTAAATCAGTTGATGAATGAGAGAGAAAAAATTAATTTTTTATACTAAGAGCTC AAAAAGTAAAACTCCTTATATAAAAACTAATTCTTATTTTTAATAACTAAGAACTTCACGTCAGCCTCCTCCAATGGTTA TATGAAGTCTAATATATAATGATTTTGTGTTTGTGTTATAGTTATCCTCCAAGTAAACTTATACAATAGTAATGATAAAA AGAAGCTATTGGACGCAAAAAAGGGGGAAGAAAAAAATATTTGCTTTACACATTAATTGAAGTCTAATCTTAAATTTATT TTTAATATTATTTTGATTTAAACAATTATGTGTGGATTTATATACTTTCATGGGTATGCCCATGAATATCCACAAATATT TTAAAATCTGATTAAAATTCAATTAATGGATATCTATATGGATATGCAGTGAGTACACGTATGATTTTTTACTTAAATAA CGGGTGGTAGATATAAACAATCCATGCCTACCCATACCAATTGGCATCCCTAGATGGGATGCTAAAGGGCAAAGGGGTCC TTTCCATTAGTATTAACTACTAAGTACAAGCTCCATGAAAACTAATTATTGTTAATTACTTTAGTTTGTTTTTGGTTGCC CGTCAATTTGTTGCACCCACCTTAACACTCTGTTTGGTAGAGAAGAAAGAGATAGAGAAGAGAGAGTAGAGAAGAGAGAA GTTGAGTAGAGAGAAATATGTGAGAAATAGAGTAGATTTCATGGGTTGTTTGGTATGATAGAGATAGAGGTGAAAGAGAG AAGAGAGAGTGTCACTTTTCATATCAAAAGACATTTTTACCCATAAGTTTTTTAAATATTTATATAAAAGATCAAAATGG TAAGTGGGGCAAAATTGGAAAGTAAAAAAAATGAAGCAACATACATCATTTCTTCTCAAAATGGAGAGATTGCTAAAAGG TGGGGTGGCCCACCATAATTCTCTCTCTCCTACATTATTTTATGAACCAAACAAGGGTGGAAGTATAATCTCACCTCTAA CTTCATCTATCTTATCTCTCTCTCTTCAAACTCTCTCCTACCAAACAAAGTGTAAGTGTCCTTTATGAACAGGTATTAAA TTACTGCTTCACCTGCCTTGCAATAGTTCTTTTAAGTTTTTTTTGAGGAAAATAATTCTTTTAAGTTTAATTACACTTTT AGTACTTATAATTTTAACTTTTAGTCTTTATAATTTTAAGAATGTGACTCATATATATAACTAATTTCAATTGCTTAAAA ATCAAACAAATTTACTCCACATTAACTTTTCATCCAATAACTCATAAAATAATTGATTTATTCCACAATTTTTAATGTCA AAAGTGACATAAATAATCTTTAGATGTTATTCATGTAAAAAAGTATGATCTACAATTTATATTTTCGATGTAAAAAAAAA AAGTGTGATCTACATTAATTATTTTCCCTAATGATTGGATGAAAATTTAATGGGTTGACTGGTGTTCAATTTTCAAGGTA GAAGTGCTTAATTTGAGCATCAGGAAGGAACCAAAATAACGCTTTAATGGATGTTTTCCACTAAATTCATCAGACCTCAA ATCTAAAACATTTAAACAAATAATTCCACACCTGTTGATCGATGCTCTTGGTTGTTTTAAAGAAGTAGCTTTATAGACCA TTTTTGTTTTTTCTTTGTTCATTTATATTTGGACTGATAAAAATAAAGTTAACTTTTTTTTTAAAGTTAACTAGAATTAG ATGAAGTACAAAATAATATTAAAATGTGTAATTTCATCTAATATTTTATTTTTCTTCAATTTAACAATATGACATGATTA TAGATTCCTTCATTTTATTCCATTACGTTCTATCTACATATCATCTCACAGTTCTATTTTAATTATTTCTTTGAACTTAA TTACTTCCAAATTAACCAAATCGGCCAATTTCATTTACTAGTGGGAGGGTGTTTGAATTAATCCTGCAGGCTCGACGTGC TTTGCGTGCATTGAAGGGATTAGTGAGGCTGCAAGCACTGGTGAGGGGACATAACGTGCGCAAGCAAGCACAGATGACAA TGCGGTGCATGCAAGCGTTAGTCCGGGTTCAGTCACGGGTGAGAGCTCGCCGAATCCAATTGAGTCATGATCAGAAGACA ACACTGATGCTGGAGAAGGAGGAGGAACACCAAAGAATACAAGTTGTGAAGCAAGCAAAGCCTAAGCCCATGATGAGCCC CATGAGAAGGAGGTTAGACACTACTTCCATTAATGATTGGGATAATAAGGGTCATAGTAGCCAGAAAATAAAGGAAAATG ATTTGAGGAAACATGAAGTTGTCATGAAGAGGGAGAGAGCTCTTGCATATGCTTTCAACTATCAACAGGTTAGTCTTGAT CATTTCTCACCACACACACTATTTTTTATATCAGCGCCGCGCCTTGCTACTAGTTAAACTCAAATAAACTATTTCTAATT AATGAATTTAATTTCTTTTGTTTTGTAGCAACAACAAAAGCAATTTTTGCAGCGAGAGCCTAATCACGATGATATAGGAA CCTATTATTCCAATGAGCATGAAAAGGCCCAATGGGGTTGGAACTGGTTGGAGCATTGGATGTCATCACAACCATACCAT GCTACTAGTACTAGGCACTTGGGGCAACTTGAGACCTCTTACATGACTCTTGCTTCTACAACTTCAACCACCACTGATAA CATATCAGAGAAGACTGTAGAAATGGATATGGTTTCAACTCCAGGCCCAAGCAGCATCAACATGGGCCTCACGAACCAAG ACTTTCATGACTCAAGCCTGTCTCCTTATAATAGGCAACATCAGAGACTGCCGAGCCCGAATAGACCTAGTTATATGGCC CCAACACAGTCTGCAAAGGCTAAGAGCCGTGTTCAAGGCCCAGGTAAGCCACAAGTTTCATTTGTGTCTCATAGTAACTC GTCAACAAAAGGTGGTTCTAATATCGGGTCAGGTTGTGATTCTTCAAGCTCAGGTGTAGGGAATACTACTCACCAATTTC TAAGTAGCCCAAGCCCAAAAGTTAATGGGATGCATTCACATTCTAGACGAAATCTGGGTGGTAGTCGTGATGATCTTGTT GAAGATTAGGCCCTTCCACTTGGAGCCCACGGTTGGGTGTAATTTGATTAATTTGCATTTTCTTTCTTAAAAAGATAAAA AAAACAAAATTGTAATATTATTACAATAATGTTTGTATACTAATCCGATTGATCATATGGAATGAGTATCTATGGCCAAT ATGTATAACGAGGTCATGGGTTGAGATTGTAATTGTTAGAAGTCTTACATTGATTAGAGATATGGTCAAACAAATGTTTA TAAAGAGTAATGCAACCCTCAACTATTGAGCTAGCTTTTAGATTGAGT
CDS sequence (LotjaGi1g1v0196100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAAAAAAGGAGGAAGCTGGTTCTCGTCGGTGAGGAAAGTTTTCAAGTCATCATCATCATCATCATCTAAAGAGGA GAAGATCAAGAAGGAAATTAGCTGCAGGCATGAGGCGCCGGAAGTGGTTTCTTTTGAGCATTTTCCTGCAGAGAGTTCCA TTGATGTCGACGACACAAACAACGAGGAGAGCATCACCACATCAACAACGCCTGTGACTGAAGATAGAGATCATGCCATT GCCGTTGCAGCAGCAACCGCCGAAGCGGCTGAAGCTGCTGTGGTGGCTGCTCAAGCTGCTGCTAGAGTTGTGAGATTGGC AGGTTATGGACGTCATTCCAAGGAAGAAAGAGCAGCAGCACTCATTCAATCATACTACAGAGGATACCTTGCTCGACGTG CTTTGCGTGCATTGAAGGGATTAGTGAGGCTGCAAGCACTGGTGAGGGGACATAACGTGCGCAAGCAAGCACAGATGACA ATGCGGTGCATGCAAGCGTTAGTCCGGGTTCAGTCACGGGTGAGAGCTCGCCGAATCCAATTGAGTCATGATCAGAAGAC AACACTGATGCTGGAGAAGGAGGAGGAACACCAAAGAATACAAGTTGTGAAGCAAGCAAAGCCTAAGCCCATGATGAGCC CCATGAGAAGGAGGTTAGACACTACTTCCATTAATGATTGGGATAATAAGGGTCATAGTAGCCAGAAAATAAAGGAAAAT GATTTGAGGAAACATGAAGTTGTCATGAAGAGGGAGAGAGCTCTTGCATATGCTTTCAACTATCAACAGCAACAACAAAA GCAATTTTTGCAGCGAGAGCCTAATCACGATGATATAGGAACCTATTATTCCAATGAGCATGAAAAGGCCCAATGGGGTT GGAACTGGTTGGAGCATTGGATGTCATCACAACCATACCATGCTACTAGTACTAGGCACTTGGGGCAACTTGAGACCTCT TACATGACTCTTGCTTCTACAACTTCAACCACCACTGATAACATATCAGAGAAGACTGTAGAAATGGATATGGTTTCAAC TCCAGGCCCAAGCAGCATCAACATGGGCCTCACGAACCAAGACTTTCATGACTCAAGCCTGTCTCCTTATAATAGGCAAC ATCAGAGACTGCCGAGCCCGAATAGACCTAGTTATATGGCCCCAACACAGTCTGCAAAGGCTAAGAGCCGTGTTCAAGGC CCAGGTAAGCCACAAGTTTCATTTGTGTCTCATAGTAACTCGTCAACAAAAGGTGGTTCTAATATCGGGTCAGGTTGTGA TTCTTCAAGCTCAGGTGTAGGGAATACTACTCACCAATTTCTAAGTAGCCCAAGCCCAAAAGTTAATGGGATGCATTCAC ATTCTAGACGAAATCTGGGTGGTAGTCGTGATGATCTTGTTGAAGATTAG
Protein sequence (LotjaGi1g1v0196100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKKGGSWFSSVRKVFKSSSSSSSKEEKIKKEISCRHEAPEVVSFEHFPAESSIDVDDTNNEESITTSTTPVTEDRDHAI AVAAATAEAAEAAVVAAQAAARVVRLAGYGRHSKEERAAALIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMT MRCMQALVRVQSRVRARRIQLSHDQKTTLMLEKEEEHQRIQVVKQAKPKPMMSPMRRRLDTTSINDWDNKGHSSQKIKEN DLRKHEVVMKRERALAYAFNYQQQQQKQFLQREPNHDDIGTYYSNEHEKAQWGWNWLEHWMSSQPYHATSTRHLGQLETS YMTLASTTSTTTDNISEKTVEMDMVSTPGPSSINMGLTNQDFHDSSLSPYNRQHQRLPSPNRPSYMAPTQSAKAKSRVQG PGKPQVSFVSHSNSSTKGGSNIGSGCDSSSSGVGNTTHQFLSSPSPKVNGMHSHSRRNLGGSRDDLVED
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 34 | 34 | - | – | |
| PANTHER | 1 | 466 | 466 | 5.9E-160 | – | |
| PANTHER | 1 | 466 | 466 | 5.9E-160 | – | |
| MobiDBLite | 20 | 34 | 15 | - | – | |
| SMART | 114 | 136 | 23 | 4.4E-6 | ||
| Gene3D | 114 | 156 | 43 | 2.2E-8 | – | |
| ProSiteProfiles | 115 | 143 | 29 | 10.164 | ||
| Pfam | 116 | 136 | 21 | 9.4E-6 | ||
| SMART | 137 | 158 | 22 | 210.0 | ||
| ProSiteProfiles | 139 | 166 | 28 | 8.627 | ||
| Pfam | 142 | 157 | 16 | 0.18 | ||
| MobiDBLite | 345 | 396 | 52 | - | – | |
| MobiDBLite | 345 | 469 | 125 | - | – | |
| Pfam | 371 | 412 | 42 | 6.8E-6 | ||
| MobiDBLite | 403 | 456 | 54 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0196100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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