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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0200600 |
| Transcript ID | LotjaGi1g1v0200600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 7 long form isogeny; TAIR: AT2G25010.1 Aminotransferase-like, plant mobile domain family protein; Swiss-Prot: sp|Q9SK32|MAIL1_ARATH Protein MAIN-LIKE 1; TrEMBL-Plants: tr|A0A0S3RPZ5|A0A0S3RPZ5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0200600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:42449718..42453916) extracted from Lotus japonicus Gifu genome v1.2.
CTCAAATGTGTTGTACATATCCAGTTGAAAAGAATCCCAAATACATACTATTTTTTGTTGAGATGAAGCCCAAATACAAA TAATATAAGCAAATATCAAAAACCACTCAGTGTATATAATAACAAAAAACCTACGGCCCATTTCCTTTATACTAGTAAGT AATAAGGTGAAACCCTAACCAGTAACCACAAAGGCATAAACTGTGCGCAGCCCTTCATCCCTTCATTCAGATCTGGTTTT GTTTTTTAATCAACTACAAGGAGGAGTCCCCAGGTGTGTAAAACGCAGCACACTAATAGTAAGATGGCTTTTTTATTGAA GGATTCAAAACAGAGGATACTAATCTTCTACCCAAGCGTTGGATATTACTCTGTTTATGTTTGCTGCTGGGCTATTCTTG TTTCTTCTTTTTTTATTTATTTATGGGTTTCATTCCTCTAACTTCTCTTCTTCATTGATCTGATGTACTTGGATGGCACA CGGGAAGAAGTTTTTTTTGGTATGATGTCGTTTGACTTTTTTTGGGAAAAAATTGACTCGCCGATCCAACCTTACAGCCG AGTCACCGGTTTTTTGTCTAAACCGGCCGAGTCATTCCGGTTCGTAACGGTTCAATTGCATGGCTGATCCGATGTGTGAC TCGAACCGGTCAGGGGTCCGATTCCCGGTCGGACCGGCTGGTCCGGTCCGAGTCTGATAACACTGCTTTTCTCTTCTTCT TTAGGTAAGGTGGAGGTGGAAATGGTTTCTAAACATAACATTATTCTTTATTTTAACCTGGTGCAGTTTTTTCTTTGATG ACATATGCACAGCCAGAAAGGAAATATTAAAAAAATAATGGGGAAATAACTGGTCCTGCTCCTGCACATTGGAGTTGGAC CCTGCTATATGCCAGGGACTCGAAGTGGGCTCCTTGCAAAACATGTTGAAAGCATAAGCCCACAGTATATTTTGATGGCC AGGACTATTTATACCATCCCTCTTTACTATCAACACCATCCCCTTAAGTGCAAAATTACACTTATACCCCCAAATATTTT AAAAAATAACTGCTCCAATGAAAAGAAAAAAAAAACCTAATCTACACGGCTGCACCATCTCCCATCTCCCTCCTCTCATT CACGGCCCTCATCTCCTCCTCTTCATCTCCTCTCATTCTGACGGTCATCTCCTCATCTCCTTCACGGTTTCCCCACCAAA GTCCCAGCCTCCATCACGGTCCTCCTTCACATTTCCCCACCAAAACCCTAGCCTCCATCACGGTTTCTCCGTTGTCCATC ACCATCACGATTTCAGAAGGAGAAGAAAGAAAGAGGAAGAAGGACTCAATTTCAGAAGGAACCTTGACTCTGGTAAGTCC CTCTGAGTTGTTCCCTTTGGTTTGCTTAAAAACCCACACACGGTTTTTCCCTCTGAGTTGTTCCCTTATCATTCCATTTG CCCAATGTTGTTCCCTCCGAGTTGTTAGCCTGTTTAAAAACCCACACAGTTTCACCTTTCCGCAATCAAGGATTGCGGTA GTGTGGCATCGCGGGTTAGTTTCCGCAGCTATGATAGCGGTAGTTTCCGCAGCTATGATAGCGGTAGTTTCCGCAACTAT GATAGCGGTAGTTTCCGCAGCTATGATAGCGGTAGGGTAATTCGATCAAGAAGCACAGGAGTTATAATTTGCAGTATTAA TATGTGATTTTCAAAATTAGTAATATTCTAGCACAGGTCTGTTTCCTTTGTAATATTCTCAGGTCTGTTCCCTTTATTCT AGCTTGTTATAATTTGTAATATTCTAGCTTGTTTCCTTTGTGATTCAAATTAGTTCTAATTTCTGGTTAATTAGCATGAA ATCATGTCAGCTACAGATTTCATATCATGTGTAGGCCAGAAACTTGTGATGCCATAAAATCATGTTTTTATTAATATGTG CTTTGGGTTTTGTTTTGTAAATAAAGAACTAACATTGATTTTCTTTGTTAACACAGGCATGATGGCAAGGACAAAACATA CACAACGCGTTGTGGGAGCGGCTTCACGACCACCACATCCTCCCCGAGACCGTTCGCGAACTCATGCTTCCGCTCGCTGA GATCGTCAAGGGACTCAGGGTGTGGGAGAAGTTGAGGAGGGTGTGCTGGTTAATGCACGACATTGGGGTGCTGAGGATGG TGATGGTCTGGAGAATGAGAATGAGAATGACAATGATTATGAGAATGAGAATGAGAATGATGATGATAATGAGAATGATA ATGAGAATGAGGTTGAGATGGGTTCTGAAGATGGTGATGAGGATGGTAATAGTGAGCAGGATGGAAAGTCTGAGGATGGT GATGGAACAGAGGGTGTTTGGTATCCCGGAGGTCCCTATGACCTCTCTCTGTTGCCTAAGTTTGGGCAGCATATAGCGCA TGACGTCTGGAAGTCATATGTGCGATCTGACTTCAAATGTAGGGCCCCATTGAAGATTCATCATCATGGAAAACACTTCT TTCCTGTAAAATTCTACTCTGACAATGTGAAGACACTTGTGGCAGCTGCAGGGTTGGGACACCTTCCGTATAGTTGTAAC GGCGGCTCAGTTGACCTTAGCATTGTGACCGCCTTTGTTGAGCGATGGATGCCAGAGACGTCCTCATTTCATATGCCGTG GGGCGAGATGACGATCACTCTAGATGACGTCTCAGCTCTATTGCACATCCCTGTGGTAGGGTCCTTTTTCTCATTGGGCA AGCCGACTAAGGAAGAGGCTGCCCCTGTGGTTGTTGATTTGCTGGGGGTGACAATTGAGGAGGTGCAGGATGAGTTTCGG AGGTGTAGAGGTCCTAGTCTTCATTATGCTTGGCTTCTAGCTCTTGTGAAAAACCGTGTGAAGGAATCGAAATGGACAGA AGCAGCCCGAGCTTACTTGTTACGCTTGGTTGGCATGACTCTCTTTTGTGATAAGAGTAACACGTCTGTTAGTGTTGCCT ATCTTAAGCTTTTCAGGGATATTAGCTTGGCTGGTCAGTATGCATGGGGTGCGGCGGCGTTGGCATATTTGTATGGTCAG TTAGGGGAGGCTTGCAAAAAGACTGGGAGGACAGTTGCTGGGTATTTAACTTTGCTACAGGTCAGTATTTGAGATATTTG TTGTTAAGTTCATTTGTATTTTTTTGTATTTTAATACTGACACCTTAGATATGCAGGCGTGGGTATATGCACGTTTTCCT GGGTCGCTGTTTGAGAGAAAGGAGTTCCCTCAATACAAAGCGGATATGTCTGTGGCTAGGAGGTGGTTGGCATTCAGGGG GACAAAGAAAGTGGACCAGAAGAGACTTAATCTTGATAACTTTCCTGCTGGTGGAGTGATATGGAAGCCTTATATGGACC ATTATGTTCATCGTTCATTTGAACATGTCTCACTGTATAGTGGATTCATCAGGTTCAGCGGCTCAATTTATCCATACCTA CCTGAGCGTGTATCCAGGCAGTTTGGGATTGTGCAGTCCAAGCCTCGAGCTCCTCCATCAAAAGTTTCATGCGAGGATTG TGATGCTATGTGGATGGATTGGCGAAACCATACTATTAGAGGACGCTATGTTGATTACCCGCACGAGTGTGATATTGAGT ACAATGACTGGTACAAACAACACTCACATCCTTTCATGATTCCTGAGGAGCTGAGAGTTGACCGTTGGTCATTTCTTGAG GTTTGTTTAACTTAACCCTGTATTGACACTTTCTTGCAATATTACCTTGCGAATATTGACACTTTCTTTGAATGTTACAG GGTCAGTTTGCTTTGCTGTCGACATACTCTACTGTTGCTGTTAATCCAGAGACTGTTGGGGCACCCGCAGAGGGCACAAC CATGTGGGATGTAGTTCATACTATGCATTCCATTATTCAGAAGACATTGGAGGGACCGGAGGAGCCAAAGCAACGTAGAA AGAAGAGGAGTGCTAGCGGGGTTGGGACTTCAGCTGATTATGAGTGATGCTAGTGTTTATGAGTGATGGATGTGTTTATG TTGTTGACTTTGGTAGTTGTGTTTATGTTTATGGACATGTGTTTATGTGTTTATGTTGTTTATGTTTATGGACATGGATG TTGTATAGGTCTATGTTTATGGACATGGATGAGTTTATGTTTATGGGAAACTGCAGCCAAGTTTTAGTTTCTGTTCTCAT CTTGTATACTTTCTGTTAAATTTTTACTGAGAATTTTAC
CDS sequence (LotjaGi1g1v0200600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTCTGAAGATGGTGATGAGGATGGTAATAGTGAGCAGGATGGAAAGTCTGAGGATGGTGATGGAACAGAGGGTGT TTGGTATCCCGGAGGTCCCTATGACCTCTCTCTGTTGCCTAAGTTTGGGCAGCATATAGCGCATGACGTCTGGAAGTCAT ATGTGCGATCTGACTTCAAATGTAGGGCCCCATTGAAGATTCATCATCATGGAAAACACTTCTTTCCTGTAAAATTCTAC TCTGACAATGTGAAGACACTTGTGGCAGCTGCAGGGTTGGGACACCTTCCGTATAGTTGTAACGGCGGCTCAGTTGACCT TAGCATTGTGACCGCCTTTGTTGAGCGATGGATGCCAGAGACGTCCTCATTTCATATGCCGTGGGGCGAGATGACGATCA CTCTAGATGACGTCTCAGCTCTATTGCACATCCCTGTGGTAGGGTCCTTTTTCTCATTGGGCAAGCCGACTAAGGAAGAG GCTGCCCCTGTGGTTGTTGATTTGCTGGGGGTGACAATTGAGGAGGTGCAGGATGAGTTTCGGAGGTGTAGAGGTCCTAG TCTTCATTATGCTTGGCTTCTAGCTCTTGTGAAAAACCGTGTGAAGGAATCGAAATGGACAGAAGCAGCCCGAGCTTACT TGTTACGCTTGGTTGGCATGACTCTCTTTTGTGATAAGAGTAACACGTCTGTTAGTGTTGCCTATCTTAAGCTTTTCAGG GATATTAGCTTGGCTGGTCAGTATGCATGGGGTGCGGCGGCGTTGGCATATTTGTATGGTCAGTTAGGGGAGGCTTGCAA AAAGACTGGGAGGACAGTTGCTGGGTATTTAACTTTGCTACAGGCGTGGGTATATGCACGTTTTCCTGGGTCGCTGTTTG AGAGAAAGGAGTTCCCTCAATACAAAGCGGATATGTCTGTGGCTAGGAGGTGGTTGGCATTCAGGGGGACAAAGAAAGTG GACCAGAAGAGACTTAATCTTGATAACTTTCCTGCTGGTGGAGTGATATGGAAGCCTTATATGGACCATTATGTTCATCG TTCATTTGAACATGTCTCACTGTATAGTGGATTCATCAGGTTCAGCGGCTCAATTTATCCATACCTACCTGAGCGTGTAT CCAGGCAGTTTGGGATTGTGCAGTCCAAGCCTCGAGCTCCTCCATCAAAAGTTTCATGCGAGGATTGTGATGCTATGTGG ATGGATTGGCGAAACCATACTATTAGAGGACGCTATGTTGATTACCCGCACGAGTGTGATATTGAGTACAATGACTGGTA CAAACAACACTCACATCCTTTCATGATTCCTGAGGAGCTGAGAGTTGACCGTTGGTCATTTCTTGAGGGTCAGTTTGCTT TGCTGTCGACATACTCTACTGTTGCTGTTAATCCAGAGACTGTTGGGGCACCCGCAGAGGGCACAACCATGTGGGATGTA GTTCATACTATGCATTCCATTATTCAGAAGACATTGGAGGGACCGGAGGAGCCAAAGCAACGTAGAAAGAAGAGGAGTGC TAGCGGGGTTGGGACTTCAGCTGATTATGAGTGA
Protein sequence (LotjaGi1g1v0200600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSEDGDEDGNSEQDGKSEDGDGTEGVWYPGGPYDLSLLPKFGQHIAHDVWKSYVRSDFKCRAPLKIHHHGKHFFPVKFY SDNVKTLVAAAGLGHLPYSCNGGSVDLSIVTAFVERWMPETSSFHMPWGEMTITLDDVSALLHIPVVGSFFSLGKPTKEE AAPVVVDLLGVTIEEVQDEFRRCRGPSLHYAWLLALVKNRVKESKWTEAARAYLLRLVGMTLFCDKSNTSVSVAYLKLFR DISLAGQYAWGAAALAYLYGQLGEACKKTGRTVAGYLTLLQAWVYARFPGSLFERKEFPQYKADMSVARRWLAFRGTKKV DQKRLNLDNFPAGGVIWKPYMDHYVHRSFEHVSLYSGFIRFSGSIYPYLPERVSRQFGIVQSKPRAPPSKVSCEDCDAMW MDWRNHTIRGRYVDYPHECDIEYNDWYKQHSHPFMIPEELRVDRWSFLEGQFALLSTYSTVAVNPETVGAPAEGTTMWDV VHTMHSIIQKTLEGPEEPKQRRKKRSASGVGTSADYE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 25 | 25 | - | – | |
| MobiDBLite | 1 | 15 | 15 | - | – | |
| PANTHER | 32 | 343 | 312 | 6.4E-49 | – | |
| PANTHER | 32 | 343 | 312 | 6.4E-49 | – | |
| Pfam | 106 | 428 | 323 | 9.3E-59 | ||
| MobiDBLite | 491 | 517 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0200600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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