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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0203200 |
| Transcript ID | LotjaGi1g1v0203200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acyl-[acyl]-carrier-protein] hydrolase; TAIR: AT1G08510.1 fatty acyl-ACP thioesterases B; Swiss-Prot: sp|Q9SQI3|FATB_GOSHI Palmitoyl-acyl carrier protein thioesterase, chloroplastic; TrEMBL-Plants: tr|A0A151SLK9|A0A151SLK9_CAJCA Acyl-[acyl]-carrier-protein] hydrolase; Found in the gene: LotjaGi1g1v0203200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:43635648..43640347) extracted from Lotus japonicus Gifu genome v1.2.
GGGGGTGGGAGGGCCAGGTGGATTGTATATAACGAGGTGGCAGCACGCCAATTTGGTGTCACTCACACAATCGCTGGCCC TAAAACACTATATTATGGCTCACCTTTTTACTATTCAAATTCAAATATAACAAAACCGATACACCCCAGAAATTTTGGAT TCCAACTCCAAAACGAGAGAGAACAACAAGAAAAACAGACAGTGCTCACACAACCACAACGGGAGGAGAAAAGGGTCTGT TTTTCCTGTTAATTCTTCTTCGTCTCAACTCAATCAAACAACATAACCCACTTCTCCCCCTTTCTTCCATTTTTTCACTA AGGTACGAAACGCCGCGTTTTCTTCCTTTCTAGTTTTTACCCTCATTTTCGCCTCTGAATCTTGCTCTAGCTGTTTGTTA GCTCAGAAAAATAAAATCACAACCCCGCTGCGTCGTTTTTGTGAATTTTGACGACACAGCGGGTTGTGATTTTGTTGCAG ATTGTCTTAATTTTCCGTGAATTTTTCGGCCATTAATGCAATCATGGTTTGCGATTCTTTCTAAGATTCAATTCAAACTC AGATCTGCACCGACTTTTGCAACCACTTTTGCATTTATTGCAAATTTATTTGCTCGCAAAAATTGGTGTCTGAAAATTCT CATCATCCTAACTTTTATTTGTTTTCTGTGGATTCTCTCACTAAATTTCCAATTTCTGTTTGATTACAATCAAATTGAAA TGATTTGGTAGCGCTAGCTGTTTTGTAATCAGTGAAATTGGAGGTTTTGAGAGAACATGTTTATGATTATGCTATGCATT GTTTATTTTGAATTTTTTTTTGAAATCTGGCTCCATCTTGGCATGCAGCTGAAGAACTCAATATGGTGGCAACTGCTGCT ACGTCGTCGTTTTTTCCTGTGACTTCGCCGTCACCGGAATCTGGTGGAAAAGGCAAGAGAATCGGGGGTGGTGGCTCTGC TAACCTCAATGGACTCAAATCCAAACATGGGTCTACTGGTGGCTTGCACGTTAAGGCAAATGCACAAGCCCCTCCAAGGA TCAATGGAACCGTGGTTTCTACTACCCCTGCAGAAACTGTGAAGCGTGAGGGTGATTATCCATCATCATCATCATCATCA TCAAGCCCTCCGCCGAGGACTTTCATCAACCAGTTGCCTGATTGGAGCATGCTCCTTGCTGCCATCACCACCATCTTCCT GGCTGCAGAAAAGCAGTGGATGATGCTTGATTGGAAGCCGAGGCGGCCTGACATGCTCATTGATCCTTTTGGGATAGGAA AAATTGTTCAGGATGGTCTTGTCTACAGGCAAAACTTTTCTATCAGATCCTATGAAATAGGGGCTGATCGAACCGCCTCT ATAGAGACGTTAATGAATCATTTACAGGTATGCTCATGCAAGTGAGGTTTTGATTGTGTTGTTTTTTGGAGATAAACTGT TTGTGTTGTGCCTATAAGGAGGGTTTTAAATTGGGATTTGGAGACAAATGCGGATGAAAAAGGTCGCAATTGTGGTCGTG ATGTCGTTGGCATGACTTCAAAACCCAAATCCGTTGTGTTGTGGCTGCAATTGAGGTTGCTGTCTGCGACCGCAATTTAG AACTTTCCCTATAACTAGATAGGATTGTAGATTTTCTTCACTGCACGAAGGGTTGAATTTCCTATGAAGATGATGGCAGC TTGCTTTTCCCCCTTTTTTGTCTTAATTATTCGTTTAACAACAGGAAACTGCACTTAATCATGTGAAGACTGCTGGGCTT CTTGGTGATGGCTTTGGTTCTACGCCAGAAATGTGCAAAAAGAACTTGATATGGGTAGTGACCCGGATGCAGGTTGTGGT TGATCGTTATCCTACATGGTAAATCAGGATGGCTCACCTTTTTGTTTGACCTGTGAATTGCAATTGTCCATGTTCAGCTG CTACTTCTACCTCTTTCATTCATAGGGATTTTTACTGTGATAATTATTGGACTTCTGCTACTTTTGTTCTATCAATTATG CATCATGTTCCCCAGAAATGGCTTAATAGTTGAGAGATTTTGATTTACCTATGAATTCTGTAATATGTGTGGAATTCTTC CCGGTGATAATAGATCTGATAAGCATAAGTTATGCTAACTGCTGAATCTTGCATTGGAGATAAGTCCTTTGCCTTAAGGC TGTGAACAGGATATTGATATATCATGGTATTAATATAATTAATAAAACTGAAAAAATTGTAAATTTCTTGAGTAATCTTA GGTTTTTAAATGGTAAAATTTTATGTACATACCCAGGCTTTTGAAAGAGGCAACTTATTGCTTTGTTCACTTGTTATATA CCATGTTTTCTGACTGAGGATTTTTTGTTTTCAGTAATTTTGGCTCGTTATTCTGTATGAAGTTTGAGAAAATATTAGTC AGGGATGAGGTTAATGTGGAGTATTCTGAATCTAGTCATCTGAAGTTGAGTAAATCTTTATTTGTTTCAGGGGTGATGTT GTTCAAGTAGACACTTGGGTTGCAGCATCGGGGAAGAATGGTATGCGTCGTGATTGGCTTGTGCGTGACATAAAAACGGG TGAAATCTTAACAAGGGCTTCCAGGTAGAAATCAATTTCAGGAACTTACTTGCTCCTTTTTTCTGTTGCCATTAGACAGA TTTAACGTGTTATTCTGTATCTGAATGGGGGAACTGTTTCCTGCAAGCTTTTATGAAGTTATATTTATGTTTAATTTGTT TTCTTTTAGTACGCCACAATTGAAAATTGAAATTTTCTGTTTGCTTTGTCGTGCATTTAGAATTTGTCATAAAGGCCATG CGTTATAGATTTAACTATGGCAATAAATTACATATATCTATGTATATCAGTTATTTAACAAAAGCATTTCCAATTATACC AACCAAATTTAAAATCTTTAAGTATAAGCTTTTAACTACTGTACATGCTGGACCTGTGCATTTTTTGATGTTTTGTTTTG ATGTTCAACAGTGTGTGGGTCATGATGAATAAACTAACAAGGAAACTATCTAAAATGCCAGAAGAAGTCAGAGGAGAAAT AGGGCCCTATTTTGTGGACTGTGCTCCAGTTGTGGACGAGGATAACAGAAAACTACCTAAACTTGATGATGCAGCTGGTT TTATTCGCAGTGGTTTAAGTGTATGCCAACTCTCTTTTATTCCCAACTATTATCATTGATTTATTTTTTTAAACATCTCA GATAATCTCTAATTATGTTATTTACTGTATCTCTAATTTCAGCCCAGATGGAGTGATCTAGATATTAACCAACATGTTAA CAATGTGAAATACATAGGGTGGATTCTGGAGGTAATTTTCCATTCTTGCATTCTTATTTACTCCTTCCCTAGATTTCTCT AGCTTGCTTTCTTTCTTCGTAGGGAGTTTTTACATGTAGGGGTCTTTTTGGCTTGTTTGCAAGCAGCAAGCAGGTTGAGT GATGATACTGTTATTCTGGCACACCCACTTTCCTTGCAATAGACACTTCAGGCCATTGGGCCTGTGATAATGTGCCAAAT AACAGTTTGTTTTTGTGGATGAATTTGGGTGTGACTTTGGCAAGTTTAGCTTCTAAAAGTGTTCAAGGTTAATTAATTTG TTGGGTTACTCTATGGGAAAACTTGATATGCTTTAATTGTTTAGTTTTTGTATATGTATTAGATTGATTAATGATTTGGG TTCTATGCAATCAAGGATTCTTTGTAATCACGAACTCACACAATCTGAGTCGTCCAATCAAGATCGGTCAGTTCATTTAT TATCTGATGGTATATATAATCTGGGTTGACCAATCTTGATGAAGTCATTCTGATTGCGTGACTGCGTGAATGTGAGGTTC TCCAACTGCAGGGCATCCATTTTCTGTTGATCAGGCCACTTAACCAAAGATTGTGATTTGAGTGTTGCAGAGTGCTCCAC AGGCAATTTTGGAGAGTCATGAGTTGTATTCCATGACTTTGGAGTACAGGAGGGAATGTGGCAGGAACAGTGTGCTGCAG TCACTAACTGATGTCTCTGGTGCTGATGTGGGCAACATAGGCGGCGGCGGATTTGTCGAGTGCAAGCACTTGCTTCGACT TGATGATGGTGCTGAGATTGTGAGGGGTAGGACTGAGTGGAAGCCCAAACCTGTGAACAACTTTGATGCTTTGAATCGAG TTCCAGGAGAAAGTGCCTGAATATATTGGCCGGTTGATCGATCGCTGGAGTGGCATCATCTGGTGTAGATTGGAAATTTA CCTCTCGCCTTGCTTGGTTTTTATCAGATCTATGTGTCCTAAATATATATACTTATTTGTGTTGATTGGATGGATAAAAG AAAAAAGAGGAGAGGGGCGAGTAAAAGAAAAACTCCATTGTCATTGTAATTGGCTCCTGCTTTGTCCTCCCTTTCAGCTC CATGTTCCATTTCATTTATGGTTATGCGAGTGCTATGTGTCATCAATATTTTTATTTGTTTTGTCAAAATGGCTAAGCAT GTATATTACTATCAATAATTATTGTCCATTTTTTAAGGATGCAATTATCCTTTTGAAAATACCAGCACTTGTCTTGAAGG CAATGACTTTTTCCTGTCTCTTAATAATATTTTGGCTTAGCACTTTTGGATCAATAATGGCATTTAGCTGCTAAAATGCG TATGTCGATTGGATATCCTGCAGACCTGCTAGTTATTTTTTTATAGGCAAATGATAGTTG
CDS sequence (LotjaGi1g1v0203200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGCAACTGCTGCTACGTCGTCGTTTTTTCCTGTGACTTCGCCGTCACCGGAATCTGGTGGAAAAGGCAAGAGAAT CGGGGGTGGTGGCTCTGCTAACCTCAATGGACTCAAATCCAAACATGGGTCTACTGGTGGCTTGCACGTTAAGGCAAATG CACAAGCCCCTCCAAGGATCAATGGAACCGTGGTTTCTACTACCCCTGCAGAAACTGTGAAGCGTGAGGGTGATTATCCA TCATCATCATCATCATCATCAAGCCCTCCGCCGAGGACTTTCATCAACCAGTTGCCTGATTGGAGCATGCTCCTTGCTGC CATCACCACCATCTTCCTGGCTGCAGAAAAGCAGTGGATGATGCTTGATTGGAAGCCGAGGCGGCCTGACATGCTCATTG ATCCTTTTGGGATAGGAAAAATTGTTCAGGATGGTCTTGTCTACAGGCAAAACTTTTCTATCAGATCCTATGAAATAGGG GCTGATCGAACCGCCTCTATAGAGACGTTAATGAATCATTTACAGGAAACTGCACTTAATCATGTGAAGACTGCTGGGCT TCTTGGTGATGGCTTTGGTTCTACGCCAGAAATGTGCAAAAAGAACTTGATATGGGTAGTGACCCGGATGCAGGTTGTGG TTGATCGTTATCCTACATGGGGTGATGTTGTTCAAGTAGACACTTGGGTTGCAGCATCGGGGAAGAATGGTATGCGTCGT GATTGGCTTGTGCGTGACATAAAAACGGGTGAAATCTTAACAAGGGCTTCCAGTGTGTGGGTCATGATGAATAAACTAAC AAGGAAACTATCTAAAATGCCAGAAGAAGTCAGAGGAGAAATAGGGCCCTATTTTGTGGACTGTGCTCCAGTTGTGGACG AGGATAACAGAAAACTACCTAAACTTGATGATGCAGCTGGTTTTATTCGCAGTGGTTTAAGTCCCAGATGGAGTGATCTA GATATTAACCAACATGTTAACAATGTGAAATACATAGGGTGGATTCTGGAGAGTGCTCCACAGGCAATTTTGGAGAGTCA TGAGTTGTATTCCATGACTTTGGAGTACAGGAGGGAATGTGGCAGGAACAGTGTGCTGCAGTCACTAACTGATGTCTCTG GTGCTGATGTGGGCAACATAGGCGGCGGCGGATTTGTCGAGTGCAAGCACTTGCTTCGACTTGATGATGGTGCTGAGATT GTGAGGGGTAGGACTGAGTGGAAGCCCAAACCTGTGAACAACTTTGATGCTTTGAATCGAGTTCCAGGAGAAAGTGCCTG A
Protein sequence (LotjaGi1g1v0203200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVATAATSSFFPVTSPSPESGGKGKRIGGGGSANLNGLKSKHGSTGGLHVKANAQAPPRINGTVVSTTPAETVKREGDYP SSSSSSSSPPPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDMLIDPFGIGKIVQDGLVYRQNFSIRSYEIG ADRTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTRMQVVVDRYPTWGDVVQVDTWVAASGKNGMRR DWLVRDIKTGEILTRASSVWVMMNKLTRKLSKMPEEVRGEIGPYFVDCAPVVDEDNRKLPKLDDAAGFIRSGLSPRWSDL DINQHVNNVKYIGWILESAPQAILESHELYSMTLEYRRECGRNSVLQSLTDVSGADVGNIGGGGFVECKHLLRLDDGAEI VRGRTEWKPKPVNNFDALNRVPGESA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 93 | 93 | - | – | |
| PANTHER | 1 | 419 | 419 | 1.3E-211 | – | |
| MobiDBLite | 1 | 16 | 16 | - | – | |
| PANTHER | 1 | 419 | 419 | 1.3E-211 | – | |
| Pfam | 1 | 134 | 134 | 1.6E-53 | ||
| MobiDBLite | 77 | 93 | 17 | - | – | |
| Gene3D | 138 | 414 | 277 | 2.2E-92 | – | |
| SUPERFAMILY | 142 | 293 | 152 | 2.27E-43 | ||
| Pfam | 145 | 408 | 264 | 4.6E-80 | ||
| CDD | 148 | 264 | 117 | 3.19837E-17 | – | |
| SUPERFAMILY | 310 | 412 | 103 | 3.73E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Fatty acid biosynthetic process | The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes. | ||
| Molecular function | Thiolester hydrolase activity | Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A. |
Expression pattern of LotjaGi1g1v0203200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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