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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0203300 |
Transcript ID | LotjaGi1g1v0203300.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Transferase family protein; TAIR: AT1G03390.1 HXXXD-type acyl-transferase family protein; Swiss-Prot: sp|Q94CD1|HHT1_ARATH Omega-hydroxypalmitate O-feruloyl transferase; TrEMBL-Plants: tr|I1KD80|I1KD80_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0203300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:43716432..43717820) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTCCTCCATGGGTTCAAGAGCTCCATCTCCGTCACTTCAGCATTCCTGTCACCATTGATAAAATGTTTCCGGTCAC GCCGTCGAGGCCAATTCCGGTTAAACCAGGTGACATTTTATACCTTTCCAACCTTGATGACATGATCGGAGCACGTGTAT TTACACCCACGGTGTACTTCTATCAATCAGACACTGCGAGTTCTTGGCGAAAACCTGTCACAGAAGTATTAAACGGCGCT CTTGCTGATGTTTTAGTGCCTTATTATCCTCTCTCTGCAAGACTGAGGGAGACCAAGAATGGTAAACTGGAAGTGTTTTT CGGACCGGAACAAGGAGCACTCATGGTTGAAGCACGATCTGACATTTCCTTATCTGAACTTGGAGACCTAACAGCTCCAA ACCCAGCTTGGGAGCCTTTGATCTTCAAATTCCCCAATGAGGAACAATATAAAGTCCTAGACATGCCACTAGTTATTGCT CAGGTTACCCAATTCCGATGCGGTGGCTTTAGCCTCGGCTTGAGGCTGTGCCATTGCATATGTGATGGCCTAGGAGCCAT GCAGTTTCTAGCTGCATGGGCCGCCACAGCAAAATCAGGGTCGCTGGTTATTGACCCTAAGCCTTGTTGGGACAGGGAAA TGTTCAAACCTCGGCACCCGCCCATGGTGAAATTCCCACACATGGAGTTCATGAGAATCGAGGAAGGCTCCAACCTGACA ATGACACTATGGCAAACCAAGCCCGTTCAGAAGTGTTATAGGATCCAGCGAGAGTTCCAAAACTACTTGAAAACTCTCGC TCAGCCATCCGATGCTGCAGGCTGCACCACTTTCGATGCCATGGCAGCTCACATTTGGAGATCCTGGGTGAAAGCTCTTG ATGTGAGACCACTAGATTACACCCTCAGGTTAACATTTTCAGTCAATGCTAGGCCAAAGCTTAGAAACCCACCTCTGAGA GAAGGGTTCTACGGCAATGTGGTGTGTGTCGCGTGCACAACAAGCTCTGTGTCAGAGCTTGTGCATGGACAACTCCCTGA GACTACTCGTCTGGTTCGCGAAGCCAGACAAAGTGTCTCAGAGGAGTACCTAAGATCCACGGTGGATTATGTTGATGTGG ACAGGCCGAAGCAGCTTGAGTTTGGGGGAAAACTAACTATTACACAATGGACCAGGTTCTCAATGTACAAGAGTGCAGAT TTTGGGTGGGGTAAGCCACTATATGCTGGTCCTATAGATTTAACACCCACGCCTCAGGTTTGTGTGTTTCTACCTGAAGG GGAGGCTGCTGATTGTAGCGGCTCTATGATTGTGTGCATATGCTTGCCTGAGTCTGCTGCGCAGAAGTTTACACAAGCAT TGTTGCTTGATTCAGTGTTGACAGAGTAA
CDS sequence (LotjaGi1g1v0203300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCCTCCATGGGTTCAAGAGCTCCATCTCCGTCACTTCAGCATTCCTGTCACCATTGATAAAATGTTTCCGGTCAC GCCGTCGAGGCCAATTCCGGTTAAACCAGGTGACATTTTATACCTTTCCAACCTTGATGACATGATCGGAGCACGTGTAT TTACACCCACGGTGTACTTCTATCAATCAGACACTGCGAGTTCTTGGCGAAAACCTGTCACAGAAGTATTAAACGGCGCT CTTGCTGATGTTTTAGTGCCTTATTATCCTCTCTCTGCAAGACTGAGGGAGACCAAGAATGGTAAACTGGAAGTGTTTTT CGGACCGGAACAAGGAGCACTCATGGTTGAAGCACGATCTGACATTTCCTTATCTGAACTTGGAGACCTAACAGCTCCAA ACCCAGCTTGGGAGCCTTTGATCTTCAAATTCCCCAATGAGGAACAATATAAAGTCCTAGACATGCCACTAGTTATTGCT CAGGTTACCCAATTCCGATGCGGTGGCTTTAGCCTCGGCTTGAGGCTGTGCCATTGCATATGTGATGGCCTAGGAGCCAT GCAGTTTCTAGCTGCATGGGCCGCCACAGCAAAATCAGGGTCGCTGGTTATTGACCCTAAGCCTTGTTGGGACAGGGAAA TGTTCAAACCTCGGCACCCGCCCATGGTGAAATTCCCACACATGGAGTTCATGAGAATCGAGGAAGGCTCCAACCTGACA ATGACACTATGGCAAACCAAGCCCGTTCAGAAGTGTTATAGGATCCAGCGAGAGTTCCAAAACTACTTGAAAACTCTCGC TCAGCCATCCGATGCTGCAGGCTGCACCACTTTCGATGCCATGGCAGCTCACATTTGGAGATCCTGGGTGAAAGCTCTTG ATGTGAGACCACTAGATTACACCCTCAGGTTAACATTTTCAGTCAATGCTAGGCCAAAGCTTAGAAACCCACCTCTGAGA GAAGGGTTCTACGGCAATGTGGTGTGTGTCGCGTGCACAACAAGCTCTGTGTCAGAGCTTGTGCATGGACAACTCCCTGA GACTACTCGTCTGGTTCGCGAAGCCAGACAAAGTGTCTCAGAGGAGTACCTAAGATCCACGGTGGATTATGTTGATGTGG ACAGGCCGAAGCAGCTTGAGTTTGGGGGAAAACTAACTATTACACAATGGACCAGGTTCTCAATGTACAAGAGTGCAGAT TTTGGGTGGGGTAAGCCACTATATGCTGGTCCTATAGATTTAACACCCACGCCTCAGGTTTGTGTGTTTCTACCTGAAGG GGAGGCTGCTGATTGTAGCGGCTCTATGATTGTGTGCATATGCTTGCCTGAGTCTGCTGCGCAGAAGTTTACACAAGCAT TGTTGCTTGATTCAGTGTTGACAGAGTAA
Protein sequence (LotjaGi1g1v0203300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPPWVQELHLRHFSIPVTIDKMFPVTPSRPIPVKPGDILYLSNLDDMIGARVFTPTVYFYQSDTASSWRKPVTEVLNGA LADVLVPYYPLSARLRETKNGKLEVFFGPEQGALMVEARSDISLSELGDLTAPNPAWEPLIFKFPNEEQYKVLDMPLVIA QVTQFRCGGFSLGLRLCHCICDGLGAMQFLAAWAATAKSGSLVIDPKPCWDREMFKPRHPPMVKFPHMEFMRIEEGSNLT MTLWQTKPVQKCYRIQREFQNYLKTLAQPSDAAGCTTFDAMAAHIWRSWVKALDVRPLDYTLRLTFSVNARPKLRNPPLR EGFYGNVVCVACTTSSVSELVHGQLPETTRLVREARQSVSEEYLRSTVDYVDVDRPKQLEFGGKLTITQWTRFSMYKSAD FGWGKPLYAGPIDLTPTPQVCVFLPEGEAADCSGSMIVCICLPESAAQKFTQALLLDSVLTE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 4 | 456 | 453 | 9.5E-241 | – | |
PANTHER | 4 | 456 | 453 | 9.5E-241 | – | |
Gene3D | 14 | 232 | 219 | 2.1E-52 | ||
Pfam | 17 | 452 | 436 | 2.1E-72 | ||
Gene3D | 242 | 455 | 214 | 1.3E-47 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Transferase activity, transferring acyl groups other than amino-acyl groups | Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi1g1v0203300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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