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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0214000 |
| Transcript ID | LotjaGi1g1v0214000.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP synthase gamma chain; TAIR: AT2G33040.1 gamma subunit of Mt ATP synthase; Swiss-Prot: sp|P26360|ATPG3_IPOBA ATP synthase subunit gamma, mitochondrial; TrEMBL-Plants: tr|I3SLV8|I3SLV8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0214000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:47183340..47188852) extracted from Lotus japonicus Gifu genome v1.2.
AAGAGAAGTGTATGGGCATCTGTTTTTGTGACAACACAATACAAGTGAGTGAGTCTCTTTGAAATTAAAGAGGTCAGAGT TTCATTTCAGCTCCCTTGGAACAATAACAAAAACACAAAGGTAAAATTGCAGTGTAGCACTAGCTAGGGTTTCCGAACAA CGAATCATCATCCTTCAATGGCGATGGCTGCTGCTCTTCGACGCGAGGGGAAGCGTTTGGCTCCTCTCATCTCTCCCCTA CCAATCCGATCCTCTCCCATTTCTCCGTCAGTTCTCGATTTGATTTCGCTTCATCTCTTCCCTTTTTCTCAATCACTGAT TGATTGATTGATTTCATTTTGTTCACAGAGACCAAACCCTCAATGGATTCCGCTCCATTTCAACTCAAATTGGTACGATT CATTCAATTACCCTTCTTCTTCCCCCTTGATTGTATTTGTATCGCTTGATTCATGGATCTGTGTAATTTTGTTGCAGTTC GAAACCGGATGAAGAGTGTCAAGAATATCCAGAAAATCACCAAGGCCATGAAGATGGTTGCCGCGTCTAAGCTACGCGCT GTTCAAACCAGAGCTGAAAATTCACGTGGGTTGTGGCAGCCCTTCACGGCCCTTCTGGGTGATGCTACAAGTATGTATGA TCTATTATTATGATTGGATCTTATACACTCTTCTGTTGATCTTTGATATTTGTATGTCATGGTTTTGTTGATGTGTGCAC AAAGTTTTTGATGTGTGCTTTTGTGAAGAGATATCACTTAAACTTTGTTTGCGTCGCAGAAGCACACATCAACAGTTTTT GTATGTATTTTTATGAATTAGGATTCAATAGTGTGTGAATGAGAATGTATGCGATGTTTCTGTTGCCCTGCCTTTGCTCA TTGGTGGTTCTGTTTCTATGCTTAGGTGTTGACGTCAAGAAGAACGTCATTGTTACCGTTTCATCTGACAAAGGTCTTTG CGGTGGAATCAATTCCACATCCGTGAAGATAAGCAGGGCTTTAAGCAAATTGAATGCGGGTAAATTTTTGCACTTCCTTT TTGCATGTATTGCCATGGTTGCAATTAGTGGCATAGTAACTTTTTGCAATTTCAAGGATGGTTATGTAACTGCAACCATG ATACAATTTAGAACCCTTGCAATGTTAAATTACATTTTTGTTGGAATATTATCAATGAGACTAAATTTGTAATGTTGAAC GATTCATAGGATAAAGTCTCTGAATGATAATAGTTTCATTCTTATTTGCTACTACAGGGCCTGATAAAGAGACAAAGTAT GTCATATTGGGCGAGAAAGCTAAAGCTCAGCTGATTCGTGACTCCAAGCAAGACATTCTGCTCTCATTAACTGAGTTGCA GAAAAATCCTCTGAATTACACTCAGGTTAGTATATTGTGTGCCATCCAATGGTTGATGGTCTTACTAAATACATTTGTGC CTGAACATTATGGTTTCTAGAGCCTACTTAAATTTTCTTGAAATGATCTGTTCATAAGTGATTACTGTTCAAAAGCCGAT ATTACAATTTGATAGTTTGATATTTCTATGGGCCGACACTACTTTAAAGGGTAAAGGACTTTAAGTAACTATGGAAATTT ATGACTTATGAGGTCAAGATGAACTTCATAATTGAATATCATGTAGATGCAACAGTTTACCTTTTAGTGTGCCTTTGAAT CTTGAGATCTCATGTTTAACATATTTCATGGAATCCAGTTCTTAGTGCTCTAAATTAATTTGTTGTTAGGAAGATTGAAT TATGACCTTCGTTATAAATGTTTTTATGGAGAAATTCTGATTGAACCCAGGCGGTGATTGATCAATGTAGGCAACCTAAC CCTGTGGAGCAAGGCTTGTGTGTTGTTGAATATTGAAATTTAGCACATGTTTGGCTCAGGTTCTTATGAGGAAATAATCG TTTATTGTTTTTAGTAGCTCTCCCAAGATGCTGCCAAAAGAGGGGGTTTTGACCCATAATAAGTTATGTGGATTTTGATG ATTGCCGATCCATATCTGACATAGATAAATTTTATATATGAATGTTTTAGATAGTCTAGTGCGGAATATGTTCCTGTCTT TCACTCTTTCCTTCTAATTGTTGTATTTTCAGGTGTCAGTCTTGGCAGATGACATTCTAAAGAATGTTGAGTTCGATGCA TTGAGGATCGTGTTCAACAAATTTCATTCAGTTGTACAGTTTTATCCAACTGTGTCAACTGTACTATCTCCTGAGGTACA TACATTTATTAAGCAGTGGTTTGGATTGCCTATGGTGTACAAGTTTTGTCCACTGAGTCCTATCATAAAGTCTTGTTGAG ATTCTAGGTTTTGGTGGTGCTTTATATGAAGAAAGGTCTGAGGACTTTTATTTTGCAATATTAGGTTTTCACTATATCCT TCTTGTTTTAATGATGCGAAGTGACGCAATTTCCTTGTAGATTGTCGAGAGAGAGACTGAATCTGGAGGAATGCTTGGGG AATTGGATTCATATGAGATTGAAGGTGGTGATTCAAAATCAGAAATTCTTCAGAATCTGTCTGAGTTCCAGTTTTCTTGT GTGAGTACTTTTTTTCAAAACTTCATGACAGACTATTTTTTTGTAGGCTGCATTTTCACATCACACTTTGATTTGAATCA TAAGCTTTAGGGTTTGTGATGGATATGTTGCACTTCTATATTCACTACCCAGCTATACTTCTCGCTCTGTTCTTTTGTTG TTTTTGTTCTAAACTGTAGTGGGTTCCTATCGACTTCATAACAAGTTCATTTTGGCGTTACAATAAGATGATTCTAGGAT TTCATGTACGGCACAAATTCTGCTCATAATTTTCTTTCTATGCATGTCCTTACATAGTACACAATATTATATAAATGAGA GAGGGAGACCTTTTCTCACACAGCATAGAAATGTCTCCCTTTTGGTTTCGAAAATGTTATTTAGTTATAGCATATTCATA ATTTGTCATGATCCTTCATTTACGAGGGAGGAGAGGGCAAGGTGGAGAGGAGAGAAGTATAAATGCGTTTTATTTTTGTA GGGTTGAGGGGGAGGGGAGTAAGTTATTTTTCCATTGATTTTTCACCTCATGATATTCAGTGTTCATTTAAACTCAAATG CATCTAAACCCTAAAGTATAAAGTGTTCGAAAATTTTATTCTAAATTACATCTTACAAATATTCTTCACATACCTAAGTG GGGCTTGAATGAGTAAAAAATAACCGTTAGTCACTTAATTGTTACTGTTTCGATTAGATAGGTGTATGTGCTTGAATTAG TTACCTGGTTAGATAATTAGTTAATGAAGGTGATATAGAGGGTATGAACGATAGGAAGTAATAATGAAGGGGGTCCTTGG ATTTGTAGTGGAGTTTGGGAACGAGAGCCTAGGTGTCTCATCTGTTCTTGTACTCTTCGATGCAGGTCAACAGACGTCGT ATTCTGTCAATAAAATTTTCATTTCTTTCCCATATTCTGATCCAGTTGTCATATTCTTAAAACATCATGTTTTATGTTCT AGGCTTTAATTTCATGTTATAAGTTGCTATTTTCCCTATATTTGCTTAGCTGCATCAAGAATGCTAGATGATAACTTTAC TGCTGGCAGCAATGTGAGGGTGTCACCGGTCACTGAAAATTCCTTGGAAATTCAGAATGTTAAGACTTGGTTATTGTCAG TCTGCGGCTTCTCATTTAAACTGTTGATCAATTCAAGGAGTTGACACTATTTTAAAATGCATTTCGGAATGTTGTTCAGC AGTTAAATTACTACACGTTTTCCTTTTCCTTTGGTATATTCTTACTTTTTGATTTATAAATTTTATGGAGAATTGCAATC AATTTAGTTGTGTGAGGCTTGTCTTGCATCAACCTGAAATTTTGTGCTGATTGTGGCTTATTATCGGTTTTACTTGTACA TTTGCTTTCTATTTCTTTTGAATGCTTTTTAATTTAGAAATGTTTAGGCAAAACCTTTTACTGTTTGAAAGTTATGTCTG TTTCAAATTATGCTTCCATTTTTCTTTACACGCTACTTTGGTATAGGTCATGTTCAATGCGGTGTTGGAGAATGCTTGCA GTGAGCAAGGAGCAAGGATGTCTGCTATGGACAGCTCTAGCAGGAATGCTGGGGATATGCTTGATCGTCTGACCCTCACC TATAACAGGTCACTTTTTCTCTTGTTCTCTTATACCACATGCATGTGTTAGTGTTGTCAAATAGTGCCGCGTACCACTGG TCTCACTGCTATTTTTCCGCTATGAGGGTTTCAGATAGCGATTTTTGGCTATCTGTTATTTTCTGCGATCCACGATTAAC AACACTGATGTGTTTAACTTCCATTCAACAACCATGGTCTTGAACAGAACTCTGTTTGGACTATCCTATTTTAACGTATT ATACTATTATTATCTCATTAAAAGCTACTGTTTCACTGACTGGTCTCCTTGTTCATTGCGACAGAACTCGTCAAGCATCA ATTACCACTGAATTGATTGAGATTATCTCTGGAGCTTCAGCGCTGGAAGGTTAATTGCGGTGAAGCAATCTGTATTATAT TTAACGATGACGATATTAAGATAATATCAGTGGGTTCTTTTGAAATTGCTGGTTCAACATTTTTTTTAATCTTACGAGAC TTCTGTAATAATTGTCCCAATATAAGTCCTGTGTTGGGGATTTCCTGGCCGACCAGATTTTTCTGGAATTATGGTTTTTG ATGTTGAGATGGAGTCTCTTTTTTAACCCGAATGACTCATAAGATTTTTCATTTTCTAATAATGATTGGCCTTCGTTTCT CGCATGGGTGTTTTAAATGGTCCTGTTGTATTTTGTCATTTTTCAGCTATTTAGGGAGTGTTTGGGTTAACAATTTCATT AAGTGTTTATAATAATATATAATCTATCTTGAGAATCTTATTGAAATGATATTAAAATCTTATACATTGGTATAAAGGCT TATAATTTGCTTCTCTCAGACACAAATACGGGGTTTCTTTCAAAGAGCTATGTCATATATGGTTATCCAACATGTATGAG GCTAAGAACTAAAAAAAAACTGTGTCCTGTATGATGAGGGAGTGGTGATTCAAATGGCGAATGTGAATTGGGGAGATTTG TGTGTTTATTTGTTTTTTTCAAGTGAGTGTTTTTTTTGTTATTTTTTATGGAGTATTGCTGAAAATAATTTAAAGAAGAT GAAGAACATGAGGAAAAATGTTTGAAGATTTATGGAAAACCAAAAGTGTAAACGGAGGCTAATGTCGGGGTACCAAAGTG GGATTGATTTTTGTTAACCACTTGCATGCCAAGTGTATAAGTGGGATTCTGAAATGCATTTTAAAATAGTATCAACTCCA AACTGTTATAAGTCTTGTCGCATTACACGGACATTTTGATATTATTGAAATTAATTAAGATTATTAATGGCATATTTTTA GGGCACCATTTATCAAGTTTTGATAAAAAAAAATATAATTTTTAAAAAATTGTAGGAATTTTAGCAAAAAATC
CDS sequence (LotjaGi1g1v0214000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGATGGCTGCTGCTCTTCGACGCGAGGGGAAGCGTTTGGCTCCTCTCATCTCTCCCCTACCAATCCGATCCTCTCC CATTTCTCCAGACCAAACCCTCAATGGATTCCGCTCCATTTCAACTCAAATTGTTCGAAACCGGATGAAGAGTGTCAAGA ATATCCAGAAAATCACCAAGGCCATGAAGATGGTTGCCGCGTCTAAGCTACGCGCTGTTCAAACCAGAGCTGAAAATTCA CGTGGGTTGTGGCAGCCCTTCACGGCCCTTCTGGGTGATGCTACAAGTGTTGACGTCAAGAAGAACGTCATTGTTACCGT TTCATCTGACAAAGGTCTTTGCGGTGGAATCAATTCCACATCCGTGAAGATAAGCAGGGCTTTAAGCAAATTGAATGCGG GGCCTGATAAAGAGACAAAGTATGTCATATTGGGCGAGAAAGCTAAAGCTCAGCTGATTCGTGACTCCAAGCAAGACATT CTGCTCTCATTAACTGAGTTGCAGAAAAATCCTCTGAATTACACTCAGGTGTCAGTCTTGGCAGATGACATTCTAAAGAA TGTTGAGTTCGATGCATTGAGGATCGTGTTCAACAAATTTCATTCAGTTGTACAGTTTTATCCAACTGTGTCAACTGTAC TATCTCCTGAGATTGTCGAGAGAGAGACTGAATCTGGAGGAATGCTTGGGGAATTGGATTCATATGAGATTGAAGGTGGT GATTCAAAATCAGAAATTCTTCAGAATCTGTCTGAGTTCCAGTTTTCTTGTGTCATGTTCAATGCGGTGTTGGAGAATGC TTGCAGTGAGCAAGGAGCAAGGATGTCTGCTATGGACAGCTCTAGCAGGAATGCTGGGGATATGCTTGATCGTCTGACCC TCACCTATAACAGAACTCGTCAAGCATCAATTACCACTGAATTGATTGAGATTATCTCTGGAGCTTCAGCGCTGGAAGGT TAA
Protein sequence (LotjaGi1g1v0214000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAMAAALRREGKRLAPLISPLPIRSSPISPDQTLNGFRSISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAVQTRAENS RGLWQPFTALLGDATSVDVKKNVIVTVSSDKGLCGGINSTSVKISRALSKLNAGPDKETKYVILGEKAKAQLIRDSKQDI LLSLTELQKNPLNYTQVSVLADDILKNVEFDALRIVFNKFHSVVQFYPTVSTVLSPEIVERETESGGMLGELDSYEIEGG DSKSEILQNLSEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGDMLDRLTLTYNRTRQASITTELIEIISGASALEG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 15 | 318 | 304 | 7.1E-109 | – | |
| Hamap | 39 | 318 | 280 | 24.181 | ||
| PANTHER | 41 | 319 | 279 | 6.1E-127 | – | |
| Gene3D | 41 | 84 | 44 | 7.9E-10 | – | |
| CDD | 41 | 315 | 275 | 1.20653E-97 | ||
| TIGRFAM | 41 | 318 | 278 | 1.4E-85 | ||
| PANTHER | 41 | 319 | 279 | 6.1E-127 | ||
| SUPERFAMILY | 43 | 318 | 276 | 4.84E-71 | ||
| Pfam | 44 | 318 | 275 | 1.4E-74 | ||
| Gene3D | 91 | 225 | 135 | 2.5E-34 | – | |
| PRINTS | 99 | 118 | 20 | 1.3E-32 | ||
| PRINTS | 191 | 208 | 18 | 1.3E-32 | ||
| Gene3D | 226 | 318 | 93 | 5.8E-27 | – | |
| PRINTS | 265 | 284 | 20 | 1.3E-32 | ||
| PRINTS | 296 | 317 | 22 | 1.3E-32 | ||
| ProSitePatterns | 304 | 317 | 14 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | ATP synthesis coupled proton transport | The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis. | ||
| Cellular component | Proton-transporting ATP synthase complex, catalytic core F(1) | The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled. | ||
| Molecular function | Proton-transporting ATP synthase activity, rotational mechanism | Enables the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism. |
Expression pattern of LotjaGi1g1v0214000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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