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LotjaGi1g1v0215700.1

Overview

Field Value
Gene ID LotjaGi1g1v0215700
Transcript ID LotjaGi1g1v0215700.1
Lotus japonicus genome version Gifu v1.2
Description WRKY family transcription factor; TAIR: AT5G15130.1 WRKY DNA-binding protein 72; Swiss-Prot: sp|Q9LXG8|WRK72_ARATH Probable WRKY transcription factor 72; TrEMBL-Plants: tr|A0A151S7G6|A0A151S7G6_CAJCA Putative WRKY transcription factor 72; Found in the gene: LotjaGi1g1v0215700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:47535516..47542484) extracted from Lotus japonicus Gifu genome v1.2.

TTTCATCGTTTTCTTCAAGTGCAACTGGATTGGCCAGTGTTTGACATTTGTACACATGTGTATCCGTGTTGGCTACCTCG ATATGTTTCCAACTTTTACAGTTATCATTTTTTTTATATCGTTTTCCCATTTGATTTTATTATTAATTATTTGCAAGAGT CAAATACTTTATGCACCTCCTTCCTATATTAACATTGAAAGACAGGCTTTGTTTTGCTGACACAGAACAAGAAAGAAAAT AAGTTGGAGATATGGAATTTGGTTCAGGAAGATCTGGTCATGATGAAGGTGAAGGAGCAAAGGTCGAGAGGAGAAGTCAA TCTAGTGGTGGTGGTGGTGGTGGTGAAGATCATCGTGAACAAGAGACTGTTGTTACCCAGGTGAAATATGATTAAGCTTT TTACTTCAATTAAATGACAAAATATCTCTCTTTTTTTCTATGTGTTGAGTTGATTCAAAGCCTATTGTATTTGTGATGTT TGTTAATTGGTAGTCAAAATATTAAGAAAATCAATCAATCTTTTCTGTGATCATGAAACGATTACATTTTCTACATCTAA ATTCCGTTTTGGTAGTATCCTCTGATAATCAATTTCTAATAAATTTCAAGATAAAACTGTCATCTACTCCTCAATTGAAT CTAAATCTATGTTTTAACTTTGAAAATTTTATGATTTATTTAGGTGTCGTGTGATTTTATATTCTTATAGATTCACTGCT AGTTGTGGGAATACCTATACTTAATTACTAAGAAAAACTGGCAAGATTACATATAAACATTAATTTTATCTGTTTACAAT TTACAGAGCTTGAAATATTGAATATAATTTCTACGGCGGCTTTGATAAGAGTTGACTCATGCATGTGCCACACATGCTAA GCCAAATCTCAGTTTCTTCATATATATACCATAAAAAGAAAGTAAAAGATGCCCAGATTCTCATATTTTTCCTCATCATT GCATGCACTTGCTCATTATTTCATTATACAAGTTGAATACTCAGCTTCCATTTTCGTTCTAGCATTATTAAAAAGCTGTT ACTCCCAAATAAATTAAAAGGAATTATAAGCCGTTGGCAAAACCCTAGTTAATTAAGAAAAAAAATTGCATTTGTGTGTA TGCATATTAACTTTTCTATGCTGTTTATGGATCTCATATGCAGGAGCCACCCATGACTGATATCGCAAGATCAATGGAAG GAGCCGGGCCAAATACTTCCTCACCCAGAAAGGAAGAGGTTAGATTTTTCAAGACCAATTGATATCATCATATTAATATT TTGTCTTTTATTGTTCAAACATAAACATAATCAACTAATCATAGTGATCCATGAATTTTAAATGGTAAATGTTGGCTAAT GAGATAGACACTCCCACAAGCGAGAAAAAAATAGAAAGAAGAGTTGTGATTTATTTATCCTCCACTCCTCTTCCATCTCA ATTCTGCTTATTATTTTCTATTTTTTTTGTATTACATCCTATATTATATTTTTCATTCTATCTCTATGTCTCTCGTAAAG TGTAAGTGGAATTAGTGTGAAGAATGGATTATTATTGGAGGTACTAAGAAAATAATCTAGAGATAAAAAGAGTAAATGTG TGAAAATGTGATAGAAGGGAAATTAAGTGTAGTGTAGAGAATCAATCAAATTAGGTTGTTGGGTGTAAGGGGTGAGGGGA TTTTTTATTCTGGGTTTTATATCATTGGGGTTGTGAGGCCCTTCCTTATTTTGAACTTGGGTTGTGGTTTCCTCCACATT CAATCTGATTCTTGTTGCTCGTTTTTGTCCTTGGAGGTTTCAACTATGGGGGGTGGTTTTTTGAATTTGTGGAGGAAATA TTTATTGAGAAAAAGATTGACTTTTTTATCGTATTAATAAATTTTATTCTTTATTAAAAAAGATATAAATCAAAACTGAT AATTATATTACTCTATGCATATAGGTTGATGAACTTGAAAATACCAAAGCTGAAATGGGTGGAGTGATACAAGAAAATCA AAGATTGAAGACGTGTTTGAACCGAATACTGAATGATTACCGCACACTCCAAATGCAATTCCACAACATAGCTGAACAAG ACACAAAAACTTCTTCTGATAAAGCAAACAACAACAACCACAATCAAGATAAAATGATGGAGGAATCCGAGCTAGTTTCT CTCAGTCTTGGAAGGCTTCCAAGTAATCCAAGAAACAATGAGAAAGCTAAAGTTATCTCTAGACCATTGAAAGAGGAAGA GAATAGGGAAGGTTTAGCACTTGGACTTGACTGCAAATTTGAAACATCAAAATCTGGAAGCACTGACAATAGCTCTGAAT TGCCATTGAAGGAAGATGTTGGGGAGACTTGGAAACCAAGTAAGGTTGACAAGACATCAATTACAATTCCTGGAGAGGAT GAAGTTTCTCAACAAAATAATCCTGCAAAGAAAACTAGAGTTTGTGTGAGAGCAAGATGTGACACCCTCACTGTAATTAT CTCTACATCTCTCATGCTCTACATTTAGAATTTGGGTTCATAAAAACTTTTAATAGAAAAAGTTATATGTATTTATCACT TTGATTTGTTAAAACAGATGAATGATGGATGCCAATGGAGGAAATATGGACAGAAGATTTCAAAGGGAAACCCTTGCCCT CGAGCTTACTATCGTTGCACAGTTGCACCCTCTTGTCCTGTCAGAAAGCAGGTAAATTTTGTAGACCTAGCAAATTTTAG AATTTGAATCCTGTGGAGCAAGTTGTTCTCTGCAGTCATGCAGCAGTAATGCTACATGTTTTTATTTTAGAACATAATAT GACATAGTAAGGGAAAAAATGTACGGAACCCTCAAATTTTAAAGGAACACAGGGAATTCACCTATGAAAATTACACCTAT TTTTTTATTTAAAATGTATAGAAAAAATATTTTATCAACTTAAGATGAAGTTATTTAACTCCTTGGAGTAAGTTAGCTTG AAAGCCTCACTTCAACAGTTTGATCCTTATGACCTGCGTTTTTTAGGGAGATCTTGGGCATTTACCGCCCTCAGCTAAGT TGAGTTAAGGTGATTTGTGAGAGCAATTTAAAAAAAAAAAAGTTACACAGCCCCACTAAAAATATATCCAAATAAAATTT TAAAATTGCGTGCTAATACCTTTCTTAAACTTGTGATTTTTATGTGTAATTGTGTTCCTCTAAGTTTTATCAATCTTTCT CATTATGTTATGGAACAAGTAATATAGTGGATTAACATGCACTCTATGCAACACCACAGGTGCAAAGATGTGCTCAGGAC ATGTCCATTTTGATCACCACCTACGAAGGGAACCACAACCACCCTCTTCCTCTTTCCGCCACCGCCATGGCCTCCACCAC TTCCGCCGCTGCCTCCATGCTACTGTCCGGCTCATCAACCTCCCACGCCGGATCAACAACCGCAGATCTTCATGGAATGA ACTTTTGTCTTTCCGACGGATCCAAATCAAAGCAATTTTACATGTCTCATCCTGCACTATCACCTTCACCTTCACACCCC ACCATCACTCTTGACCTCACTACTTCCAATAATAATCTACCTTTATCCTCACTTCCTTTTGGTAGATTCACTTCAAATTT CAACAACCCCCCAAGATACCCTTCTTCCACAAGTTTGAACTTCAGTAACTCAGAGTCCAATGCAATGTCTTGGAGCAATG GCTTCCTCAGCTACAACACTTCTCTACCATATAACAACAACAACATCCTTAGCAACCTTGGACGACAACAACAACAACAA CCAATGGAAAATAACATCTTGAATTCTTACATGCAAAGGAACAATAACAATGTTCCTACAGACACTATTGCGGAGGCAAC GAAAGCAATCACAGCAGATCCAACTTTTCAGTCAGCTTTGGCAGCAGCACTTACATCAATCATTGGCAGTACTGGATCAA GCACTACTACTCAAGGATTAAACCAGAATAATGTTGGAGAGATTTTGGGTAAGAAAAGGAAATGGGAGGAGTTGTTTCCA TCATCTTCTTCTACTTTACCATTTTCTATCCCCAAAAGCGCGTCTGCGTCTCCGGATGATAATAGAGACTAGATCCAGAC TATAGACAAATTAATCTGTGGGGTTTCTTTAGCTAGATAGAAACTTCGCCTGCAATTATGTAATTATGTGAAAGAATAAT TTTGAGAATGGACACATAAATAAAGATTGTTGTATGTAAAGCTTGATTTAGGGATGATATCCTATGATGCATGGGGCACT CATTTTGTTGTTGTACCCACCCAGTAGCGGTACTCCTTGGATACTTGAAAATACGTGTCGGTATATTCCGAAATAATTTT TCAAACAATAAAAATTAGGTGCTACATTGGTGCTTTTTAGGTACTTCTTGGTACATATTAACCAAAGCTAAAGTTTGTAT TAAGTTTTAATACCTTTTATGTATCTGATTACCGCCCGTTAAGTCTGATAGGAAGCATTTACAAGCTCATCTCCAAAGTC TTGGCATCTCAGCTTCAAGGTGTTATGCCCTCATCATCTCCGATAATCAGTTCGCTTTTACCCAAGGGAGACAAATTGCA GATTGCATACCCATTGCAAATGAGGTGGTAGATGCTATGAGGAAGAGTGAAGAGGGTGGAATTGTTCTGAAACTAGACTT CGCTAAAGCCTATGATAATATAGATTGGTCATTAATTCTTGTTGGATCTACTGGTAGAAATGGGGTTTGGGACAAAGTGG GTGAGATAGATGAAGGAATGTGTGACGACGACAAATCTAGCGGTGTTCGTAAATGGTTCCCCCAAGGATTTTTTAAATAT TGAGAAAGGGCTTCATCAAGGGGATCCTCTTTCCCCGCTACTCTTCAACATTTGCATCAATGGTCTCTCATGTATGCTGA ATAAATTGGGAAGCAATGATACTCCAAGTGGATTTCGCACTATGCCTCAACCATTTACAATTTGCGGACGATACCCTTAT CTTCTGCAGAAATAATGTTGATCAAGTCCAGAAAATTGGGGTTGCCCTAGATATTTTCTTAGCTATTTCGGGTCTTAAGG TGAATTATTCCAAATCTCAAATTCTGGGTTGCAAAGTGAGTCAGGAGGAGTTCAGGAACTTGGTAGATTTGCTTGATGTA AGTGTGGGGACTTTGCCCATCAATTACCTCGGTGCTGCCTTGGGGGACAATCCGAGGAGAAAAGTTTGGCAAAGATAGAG ATGCTATTTGGAGACGAGTGGTATGTGCAAAATATAATTGTGATCCAAATTTGTTGTTGTTACATGTGATGACTTTTACC ACTTCACACTTCTCTGTGTATATCCAAGACATTTTCAAAACTGTGAGGAAGACTCTATTATAGCAAAAGTTTTCAAAGAA GGTTGCTTTTGTTGTGTTGGATCGGGCCATAACATCCGTTTTTAGCTTGACCCTTGGCTGGAAATGACTCCCCTCTATTC CAGATTTCCCCGTTTTTTTCCCATAGCACAAGACAAAAATGTGGTCATTTCTTCCTTTGGAACCTACAACAATGGATCTT AGTCATGGTTGATTAATTTCCGGCGTCGGCTCTTTGATTGGGAAACAGAATTACTAAGACAGCTCAAGGTTGCCCTCAAT TCAATCATCCCCTGCAAAGGTTCATATTCAATTATTTGGACGGGGGATCCAAATGGCCGGTTTTCAGTTAAAATCTTATG TGCAGTTGTAGAGATTAGGATTTTTGGAGAGTTGTCATGGAAGGTTCCAAAGAAGATTCGCACAATTGCACCCCCCAAAG TCGTGTTATTTGTGTGGCAATTATTGGAAAACCGAATAGCAGTAAAGGGAAACCTGATCAAAAGAGGTGTTGTGATTGAA AATGGAGGAACCTGTGACATTTTTGGATTTCAGGAAGAAATTGAAGCTCATCTAATGCTCCGGTGTATGCAATCATGGAG ATTGTGGTGCTCAATAATGGCTAGAGAGGATATAGTCTGGTGTATTCCTCACTCTTTCAAAGAATTGATGGATGAATGGC CCTATCTAAGGGTTGGCTCAGATCCTCTTCTCTGGGACCTAATTTCGTATGTGTTGAGCTGGTCAATTTGGCATGCCCGA AACGATACCATTTTCAACCAACAAGTGTTTTCTTTTGAAGGTGTATGAGATATTCATATCATGCGGGTCATGTGGTGGAT CAAAGCTTGGTGAAAGAAGTGTCCCTTTTCCTCTTTTTATTTTGCCCAACATTTTAAAAAGGTTCGGCTTAAATCCAATG CCCCCAAGGTGTGAGCTGTTGATTTGTGTCCACTGCAATTGGGTATGATCAAGTTTAATGTTGATGGCTCATCCCGAGGT AATCCGGGTGTTAGTGGTATTGGGGGCACTTTGCGGGATGCAAATGGAATTAGTCTTGGATTTTTCTCCAAACCTTTGGG GTTGTCCTGGGCTTATATTGCAGAAATAAAAGCAATTTTGGAGGCATTACTGTTCTGCAAAAGACATGTGATTGTGGAGA GTGACTCCACCTTAGCGGTGGGTTGGGTCATGAACAGGTCTAATAGGTCATGGAAACTGTTTAATGATCTTAATCAGATT GATATGCTAATGGAGGAGGTGGGGTGTTTCGGCGTTGTTCATATCTATAGAGAAGCCAATACCGTTGTCGATCACCTGAC AAAGAATGGTTGTGACAGATCTGAAGCACTTGTGAGCTTTACCTCCTGGTGTCTTAATACCAAGTGTGTTGTGACATTCA TGCCAGAGCTAATTTCTTATGTTTGCTTGCTTGATTCATGACCTCTGGCGGCCCCTTGTGTGCCTTCAACCTTGCTATCG TTTTTTTTAATTCTTTGTAGTTGTTCTTATCTTTTGTTCCTTTTGTCTGTTATTTTTTTTAGTTCCCTGGGCTATGCCCG GCTTGTTGAACTTTTCCTCTCCTTGGAGTCTTTATTCTCCTGGAGTTATTATCAATAATATTTTCTTTTTCCAAAAAATG TATACAAGA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0215700.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAATTTGGTTCAGGAAGATCTGGTCATGATGAAGGTGAAGGAGCAAAGGTCGAGAGGAGAAGTCAATCTAGTGGTGG TGGTGGTGGTGGTGAAGATCATCGTGAACAAGAGACTGTTGTTACCCAGGAGCCACCCATGACTGATATCGCAAGATCAA TGGAAGGAGCCGGGCCAAATACTTCCTCACCCAGAAAGGAAGAGGTTGATGAACTTGAAAATACCAAAGCTGAAATGGGT GGAGTGATACAAGAAAATCAAAGATTGAAGACGTGTTTGAACCGAATACTGAATGATTACCGCACACTCCAAATGCAATT CCACAACATAGCTGAACAAGACACAAAAACTTCTTCTGATAAAGCAAACAACAACAACCACAATCAAGATAAAATGATGG AGGAATCCGAGCTAGTTTCTCTCAGTCTTGGAAGGCTTCCAAGTAATCCAAGAAACAATGAGAAAGCTAAAGTTATCTCT AGACCATTGAAAGAGGAAGAGAATAGGGAAGGTTTAGCACTTGGACTTGACTGCAAATTTGAAACATCAAAATCTGGAAG CACTGACAATAGCTCTGAATTGCCATTGAAGGAAGATGTTGGGGAGACTTGGAAACCAAGTAAGGTTGACAAGACATCAA TTACAATTCCTGGAGAGGATGAAGTTTCTCAACAAAATAATCCTGCAAAGAAAACTAGAGTTTGTGTGAGAGCAAGATGT GACACCCTCACTATGAATGATGGATGCCAATGGAGGAAATATGGACAGAAGATTTCAAAGGGAAACCCTTGCCCTCGAGC TTACTATCGTTGCACAGTTGCACCCTCTTGTCCTGTCAGAAAGCAGGTGCAAAGATGTGCTCAGGACATGTCCATTTTGA TCACCACCTACGAAGGGAACCACAACCACCCTCTTCCTCTTTCCGCCACCGCCATGGCCTCCACCACTTCCGCCGCTGCC TCCATGCTACTGTCCGGCTCATCAACCTCCCACGCCGGATCAACAACCGCAGATCTTCATGGAATGAACTTTTGTCTTTC CGACGGATCCAAATCAAAGCAATTTTACATGTCTCATCCTGCACTATCACCTTCACCTTCACACCCCACCATCACTCTTG ACCTCACTACTTCCAATAATAATCTACCTTTATCCTCACTTCCTTTTGGTAGATTCACTTCAAATTTCAACAACCCCCCA AGATACCCTTCTTCCACAAGTTTGAACTTCAGTAACTCAGAGTCCAATGCAATGTCTTGGAGCAATGGCTTCCTCAGCTA CAACACTTCTCTACCATATAACAACAACAACATCCTTAGCAACCTTGGACGACAACAACAACAACAACCAATGGAAAATA ACATCTTGAATTCTTACATGCAAAGGAACAATAACAATGTTCCTACAGACACTATTGCGGAGGCAACGAAAGCAATCACA GCAGATCCAACTTTTCAGTCAGCTTTGGCAGCAGCACTTACATCAATCATTGGCAGTACTGGATCAAGCACTACTACTCA AGGATTAAACCAGAATAATGTTGGAGAGATTTTGGGTAAGAAAAGGAAATGGGAGGAGTTGTTTCCATCATCTTCTTCTA CTTTACCATTTTCTATCCCCAAAAGCGCGTCTGCGTCTCCGGATGATAATAGAGACTAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0215700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEFGSGRSGHDEGEGAKVERRSQSSGGGGGGEDHREQETVVTQEPPMTDIARSMEGAGPNTSSPRKEEVDELENTKAEMG GVIQENQRLKTCLNRILNDYRTLQMQFHNIAEQDTKTSSDKANNNNHNQDKMMEESELVSLSLGRLPSNPRNNEKAKVIS RPLKEEENREGLALGLDCKFETSKSGSTDNSSELPLKEDVGETWKPSKVDKTSITIPGEDEVSQQNNPAKKTRVCVRARC DTLTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVRKQVQRCAQDMSILITTYEGNHNHPLPLSATAMASTTSAAA SMLLSGSSTSHAGSTTADLHGMNFCLSDGSKSKQFYMSHPALSPSPSHPTITLDLTTSNNNLPLSSLPFGRFTSNFNNPP RYPSSTSLNFSNSESNAMSWSNGFLSYNTSLPYNNNNILSNLGRQQQQQPMENNILNSYMQRNNNNVPTDTIAEATKAIT ADPTFQSALAAALTSIIGSTGSSTTTQGLNQNNVGEILGKKRKWEELFPSSSSTLPFSIPKSASASPDDNRD
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 19 19 - –
MobiDBLite
mobidb-lite
1 72 72 - –
PANTHER
PTHR31429:SF72
35 512 478 3.3E-170 –
PANTHER
PTHR31429
35 512 478 3.3E-170 –
Gene3D
G3DSA:2.20.25.80
229 307 79 3.2E-32
IPR036576
SUPERFAMILY
SSF118290
238 306 69 1.01E-26
IPR036576
ProSiteProfiles
PS50811
240 306 67 28.357
IPR003657
SMART
SM00774
245 305 61 8.8E-36
IPR003657
Pfam
PF03106
246 304 59 6.2E-24
IPR003657
MobiDBLite
mobidb-lite
529 545 17 - –
MobiDBLite
mobidb-lite
529 552 24 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003700
Molecular function DNA-binding transcription factor activity A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
Subterm of
GO:0006355
Biological process Regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
Subterm of
Regulates
GO:0043565
Molecular function Sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0215700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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