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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0219100 |
| Transcript ID | LotjaGi1g1v0219100.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; TAIR: AT1G26850.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|B9DFI7|PMT2_ARATH Probable methyltransferase PMT2; TrEMBL-Plants: tr|A0A072V5N2|A0A072V5N2_MEDTR Methyltransferase PMT2-like protein; Found in the gene: LotjaGi1g1v0219100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:48548974..48553964) extracted from Lotus japonicus Gifu genome v1.2.
TGATGGTAACTACAAAAGCATAATGACAATAATAACGTTGTGCATATGGATTTGGTTTCTCCGTAACAGAATAACCGGTG GATTCCATAGATCGAATTTCAAGTGTAAAGTTCGTTCGTTGTTGTTAACTAACCAACCAACCAATCAAAGAAAGTGTGAA GAAAAGAAACAAAGAAACCACTCGCAGTGACACATTTCCATTCCCTCGGTGTTTTCGCAGCGAGACACGGCCACGCGAAA CACAATTCCACTCCTTTCTTTTCTTTCAATTTCAAACCTCTTCTTCATTCTATGCACCAGTTCCCAAGATTTCCATCATT TTCATCATATATACCAAGTAAGCAACTGTTTTATTTAATCAAAATCCCTAAATTATGCTTTATTGTATTAATTTAATTTC AACCATGTAGGATTGATTGTATAGGGTTTGTAGAAATTGTATAAAGATTTAGATTCATCATCATGGCCACCAAAGGGAAC CCAGGAGACAATAGAAACAATAGGAGTACAATGTCTGTTTTCATTGTGGTTGGTTTTTGTGGTTTCTTCTACATATTGGG TTTGTGGCAAAGGAGTGGTTTTGGAAAAGGTGATAGCATAGCTGTTGAGATTACTAAACAGACAGATTGCAGTGTTCTCT CTGATCTTAATTACGAGACTCACCGCGACGGCGATGCGGGGACGCCGGATGATTCTGATGAACCGGTCAAGGAGTTCAAG CCGTGTGAGGATCGCTACATTGATTACACGCCTTGTCATGATCAAGTGAGGGCGATGACGTTTCCCAGAGAGAGTATGAA TTATAGAGAGAGGCATTGTCCTCCTGAGGAGGAGAAGTTGTCATGTCTCATACCTGCGCCTAGAGGGTACTCGACGCCGT TTCCTTGGCCCAAGAGTCGCGATTATGTGCCTTTCGCAAACGCGCCTTACAAGAGTTTGACGGTTGAGAAGGCTGTGCAG AATTGGATACAGTACGAAGGAAGTGTCTTCAGGTTTCCCGGTGGAGGAACGCAGTTTCCCCATGGTGCTGATGCTTACAT TGATGGACTTGCAGCTGTTATTCCCTTTGACAATGGGATGGTTAGAACCGCATTAGATACTGGCTGTGGGGTAAGTCAAA TCCAAAGAGAATAACATCCTTGTTTTGGTGTAATCTATTTTGCTGGTAATCTACATAATATGTGCATGAAGAAATTATTG TCCTTTATAACACACTCCAATCCTGGCTAATGATTGTAAGCTTTACTAGTGGATCTTCCACTTCTTAATGCTTCATCCTT GCAAAAAGTTCACATTTATTGAAATATAATTGTTTCTTTCCTGTTTTTTTAATCAAACTTTGAGCCTGTATTTGTGTGTA TCTTCTGTTTATTCTATATTCTAGCTCATTTTCTGATTATTGATGGTGCTAGGTTGCCAGTTGGGGTGCATACCTATTTA AGAAAAATGTCGTTACCATGTCAATTGCACCAAGAGACTCTCATGAAGCACAAGTTCAATTTGCTTTGGAAAGAGGTGTT CCAGCAATCATTGGTGTTCTTGGAACAATAATGCTACCTTTTCCTTCTGGATCTTTTGACATGGCACATTGTTCTCGCTG CTTGATTCCATGGGGCGTAAATGGTGAGAATAACTGATATTTCTGGCCTAGGACAATTAGAAAAACATCTTTTGGATCAA CTACAAAATTTATTCGTAACTATTTAGGTCAGTAGGGCTTCTATGTATGAAAAAGAAAGGACCATGATATATTCGTGCAT TATAATGATTCCAAGCCTTATTAAGCTTGAAGGCTTCTATTGAATATAAGTTTTAAACCTTAGCTTGTTAACTACTTATA TCTGTTCACAGTTCACACTGGCTGTAGAACCTGGATTCATTTCAAGTACTAAAACTATGGCCTCTTGATTTATAATGATT TCCAAAGTCTCACTTGCTTGTAAAATACCTGATTTTTTTTCTTAATTCAGTGTGTTTCTTGTTTTTTATTTACTGTTTGA TGATTTGTTAACAAAAGCAGAACTTTGGGTTTTAGGTTGTAAGAAATATTTTTAAACTGTAATTGTTTGTCAGGTGGAAT GTACATGAAGGAAGTTGACCGAGTTCTTAGACCTGGTGGTTACTGGATACTTTCTGGCCCCCCCATCAACTGGAAGACTA GCTACCAAGCATGGCAACGTCCTGAAGAAGAGCTTGAGGAGGAGCAGAGGCAGATTGAAGATACTGCTAAACTTCTTTGT TGGGAAAAGAAACATGAGAAAGGTGAAACTGCAATCTGGAGAAAAAGTTTAAATAATGATGAGTGCAATGAACAAGATAC TCAACCTACAATATGTGAATCCGCAAATTCGGATGATGTTTGGTAAATTGCTTCACTTCTTTTTCCCCTTTCCATCAATG TTTAAATTATTAAATAAAAATTTATTTTCAGGTAGTTAGATACCTATTATTCAAGTAACTGCTTTAATTTCTTCAAACTG AGAATCCTTTTGCCTTTAGTAGCTACTCCTAGTGGTTTATCCTTAACTCTTCCCTAACCTTTGTAATTGTAAGGATACGA GAACTTTGAATTGTATTCTATATGCATTATGTAAGTATTACTCAGGGCTTTGGTAAAATGGTGTCTTGCTTGATATTGCG TACTTAAGAAACATGATTTTTCTAGGGGTCAGATTTTTTCTATCCTTTATGATGCAAACTTCCTAGAGTTGTCCCTAATC TTTGGATTATGGACTGCTGGTTTTCAATACTTATCTGGAAGGTCTGACAATTTCTAGGTACAAGAAGATGGAAAATTGTG TTTCTCCTTCTAAACATAGTGGTTCATGGAAGCCATTCCCAGAGAGACTCTATGCTGTTCCTTCCAGAATTACCAGTGGA TCCGTTCCTGGTGTTTCCGCTGAGGTATTTGAGAACGACAGCCGATTATGGAAGAAGCATGTGAATGCATACAAACGGAT CAACAAAATCATTGACTCAGGTAGATATCGCAACATAATGGACATGAATGCTGGCCTAGGAGGTTTTGCTGCTGCCTTGG ATTCTCCCAAATTATGGGTTATGAATGTTGTGCCTACAATTGCGGAGAAAGCTAGCCTGGGTGTTATATTTGAGCGAGGA TTGATTGGCATTTACCACGACTGGTAACTTCTAAAACATGGTTTCCCTTTTTTTCTTTTATCTTCTGGTATATCCGCTGC AAATAATTTGTCACTGAGTTCATACTATTTTTCTGAATTTGTCCTTATATATACAAATTAAGATGTCAAATTATGATTCG GGTAGCCTAGACCTTCCACTTGATGAAGAAAAGTGTAAATAACATAGCATTTTATGTTTTGAAATTTTAAAAACCAATCA AATAGGAAGGTTTTGGTGGTTTTTTCAGGATTTTGAATCATCCATCCATTTTGATAAAGAGGAAAAATTTTGCTGAAATA ATTGTTAATTGAGGCAGAGGAGAAAATGGAGAACAAACTCTGGAATATAATATTGATTGATATGTGGTAATTGATGTGTT ACAAAATAGAAAACAACAACACCTCTGTGTAGCATACTAGACTCTGAATCTTAAAAAACAAGAAAACAAAATAATGAAAT GTTGAAACCAGTCTTGGGAGTTCGTCTTAGATTATATGTACTGCTGATCTTTCTTTACTACTATCACATTCTGAAATTCT TCTTTTAAGAAATAAATTCTGTGAAATTTGCTTTCAGTAGACTTCCATTTATCTACTTCACAAATATTTTTATCTGAAAA TAGTGCAGCATTGTTTAGTAAGATATAGATTGTCAATGTTTGAGTTTAGTTTATCAGTAGTTATCTTCTCATACTCATAC TGTTAAACACAGAAAAGGAATTGGTAGAAGATAGCCTTCTGTTTAATAACTATCTATTTACTACCAGGTGTGAAGCCTTC TCCACATATCCAAGGACCTATGACCTTATCCATGCAAATGGTGTTTTCAGCCTATACAAGGATAAGTGAGTCATTTCTTT TTCATTTCCTTTGTTTTTTTGTACCTATACCCCAGATGAACTGTAGTTTTTCATAAGAACTTGGATAGACTAAATGAAAG TTCCGTAGCTGAAAGATGATTACAAATTGGTAAAGCAAACTAGTTAAGGTTTTTCCTAACTCAAATTATGAATACAGGTG TAGTGCAGAAGACATTTTATTGGAGATGGACCGGATCCTACGACCTGAAGGAGCAGTAATATTTCGGGAACAAGCAGATG TGCTAATGCAGGTGAAAAGAATTGTAAAAGGTATGAGATGGAATACAAAAATGGTGGACCATGAGGATGGTCCACTGATT ACAGAGAAGGTGTTGTTTGCTGTCAAGCAGTACTGGGTTGCAGGTGATAACTCCACAAGCTCAGAGTGATGATGGCCCAA AAGCAATATTTGAATGGAAGAATAGTTCCAAAATGACCGTTGACAAAATGATTCTCCTTGTGATTTGGATTCATGGTATT TTCGGCTGAGTAAGAAGCTTGGGTCATGAGATTGTCTTGTGTCTCAGTAGGCATATGATTATTTGTTTACATGTAGAGTT AATGTAGATGTCATGTCACATATTTTATGGTTCATAAGTCATAGTCTATTAGTCTTGGCTTAGCTTCTCCGAGTCACACT TTTACTTCTCCTGAAAAAGACGGGACTCTCTTGAGATCATCATCGAGTTGATGTTATGATCTTAAAACTTAGGTTATGGT AGAGCAGGGTTTTGGCTTTTACATTTTTAGCTTCATTTTTGTTGGCAACTTTCTCCTGCTATATGAATTAATTTTAGGTG TTATTAACTCTATAACTTTTATCAGTTCCAATAGCTCTGGTTCCTGGCAATTTTTAAGTAAAGTTGTGGTTGGTTACCGG ATGAAGGACAACATCCTAATTTTTTTTTATCCAAAATATGCTAATGTTTAAAATTAAGACTCCATTTCCAAACAAGGGTA TTCCGGAAATGTATGTGTTCCACACTTACAC
CDS sequence (LotjaGi1g1v0219100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCACCAAAGGGAACCCAGGAGACAATAGAAACAATAGGAGTACAATGTCTGTTTTCATTGTGGTTGGTTTTTGTGG TTTCTTCTACATATTGGGTTTGTGGCAAAGGAGTGGTTTTGGAAAAGGTGATAGCATAGCTGTTGAGATTACTAAACAGA CAGATTGCAGTGTTCTCTCTGATCTTAATTACGAGACTCACCGCGACGGCGATGCGGGGACGCCGGATGATTCTGATGAA CCGGTCAAGGAGTTCAAGCCGTGTGAGGATCGCTACATTGATTACACGCCTTGTCATGATCAAGTGAGGGCGATGACGTT TCCCAGAGAGAGTATGAATTATAGAGAGAGGCATTGTCCTCCTGAGGAGGAGAAGTTGTCATGTCTCATACCTGCGCCTA GAGGGTACTCGACGCCGTTTCCTTGGCCCAAGAGTCGCGATTATGTGCCTTTCGCAAACGCGCCTTACAAGAGTTTGACG GTTGAGAAGGCTGTGCAGAATTGGATACAGTACGAAGGAAGTGTCTTCAGGTTTCCCGGTGGAGGAACGCAGTTTCCCCA TGGTGCTGATGCTTACATTGATGGACTTGCAGCTGTTATTCCCTTTGACAATGGGATGGTTAGAACCGCATTAGATACTG GCTGTGGGGTTGCCAGTTGGGGTGCATACCTATTTAAGAAAAATGTCGTTACCATGTCAATTGCACCAAGAGACTCTCAT GAAGCACAAGTTCAATTTGCTTTGGAAAGAGGTGTTCCAGCAATCATTGGTGTTCTTGGAACAATAATGCTACCTTTTCC TTCTGGATCTTTTGACATGGCACATTGTTCTCGCTGCTTGATTCCATGGGGCGTAAATGGTGGAATGTACATGAAGGAAG TTGACCGAGTTCTTAGACCTGGTGGTTACTGGATACTTTCTGGCCCCCCCATCAACTGGAAGACTAGCTACCAAGCATGG CAACGTCCTGAAGAAGAGCTTGAGGAGGAGCAGAGGCAGATTGAAGATACTGCTAAACTTCTTTGTTGGGAAAAGAAACA TGAGAAAGGTGAAACTGCAATCTGGAGAAAAAGTTTAAATAATGATGAGTGCAATGAACAAGATACTCAACCTACAATAT GTGAATCCGCAAATTCGGATGATGTTTGGTACAAGAAGATGGAAAATTGTGTTTCTCCTTCTAAACATAGTGGTTCATGG AAGCCATTCCCAGAGAGACTCTATGCTGTTCCTTCCAGAATTACCAGTGGATCCGTTCCTGGTGTTTCCGCTGAGGTATT TGAGAACGACAGCCGATTATGGAAGAAGCATGTGAATGCATACAAACGGATCAACAAAATCATTGACTCAGGTAGATATC GCAACATAATGGACATGAATGCTGGCCTAGGAGGTTTTGCTGCTGCCTTGGATTCTCCCAAATTATGGGTTATGAATGTT GTGCCTACAATTGCGGAGAAAGCTAGCCTGGGTGTTATATTTGAGCGAGGATTGATTGGCATTTACCACGACTGGTGTGA AGCCTTCTCCACATATCCAAGGACCTATGACCTTATCCATGCAAATGGTGTTTTCAGCCTATACAAGGATAAGTGTAGTG CAGAAGACATTTTATTGGAGATGGACCGGATCCTACGACCTGAAGGAGCAGTAATATTTCGGGAACAAGCAGATGTGCTA ATGCAGGTGAAAAGAATTGTAAAAGGTATGAGATGGAATACAAAAATGGTGGACCATGAGGATGGTCCACTGATTACAGA GAAGGTGTTGTTTGCTGTCAAGCAGTACTGGGTTGCAGGTGATAACTCCACAAGCTCAGAGTGA
Protein sequence (LotjaGi1g1v0219100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATKGNPGDNRNNRSTMSVFIVVGFCGFFYILGLWQRSGFGKGDSIAVEITKQTDCSVLSDLNYETHRDGDAGTPDDSDE PVKEFKPCEDRYIDYTPCHDQVRAMTFPRESMNYRERHCPPEEEKLSCLIPAPRGYSTPFPWPKSRDYVPFANAPYKSLT VEKAVQNWIQYEGSVFRFPGGGTQFPHGADAYIDGLAAVIPFDNGMVRTALDTGCGVASWGAYLFKKNVVTMSIAPRDSH EAQVQFALERGVPAIIGVLGTIMLPFPSGSFDMAHCSRCLIPWGVNGGMYMKEVDRVLRPGGYWILSGPPINWKTSYQAW QRPEEELEEEQRQIEDTAKLLCWEKKHEKGETAIWRKSLNNDECNEQDTQPTICESANSDDVWYKKMENCVSPSKHSGSW KPFPERLYAVPSRITSGSVPGVSAEVFENDSRLWKKHVNAYKRINKIIDSGRYRNIMDMNAGLGGFAAALDSPKLWVMNV VPTIAEKASLGVIFERGLIGIYHDWCEAFSTYPRTYDLIHANGVFSLYKDKCSAEDILLEMDRILRPEGAVIFREQADVL MQVKRIVKGMRWNTKMVDHEDGPLITEKVLFAVKQYWVAGDNSTSSE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | - | – | |
| PANTHER | 3 | 603 | 601 | 0.0 | ||
| PANTHER | 3 | 603 | 601 | 0.0 | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| Phobius | 16 | 35 | 20 | - | – | |
| Phobius | 36 | 607 | 572 | - | – | |
| Pfam | 94 | 594 | 501 | 9.0E-221 | ||
| SUPERFAMILY | 116 | 332 | 217 | 8.78E-27 | ||
| Gene3D | 196 | 366 | 171 | 3.3E-12 | – | |
| SUPERFAMILY | 440 | 581 | 142 | 5.35E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi1g1v0219100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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