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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0235900 |
| Transcript ID | LotjaGi1g1v0235900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytochrome P450; TAIR: AT5G25180.1 cytochrome P450, family 71, subfamily B, polypeptide 14; Swiss-Prot: sp|P24465|C71A1_PERAE Cytochrome P450 71A1; TrEMBL-Plants: tr|G7J477|G7J477_MEDTR Cytochrome P450 family 71 protein; Found in the gene: LotjaGi1g1v0235900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:55985430..55987583) extracted from Lotus japonicus Gifu genome v1.2.
GTGGTTTCGAATCTGAACGTGCTTTATTATGTGTATTTATGCACTCAATATGAAGCATTAAATCTACATTATGGTCTCAC ACCACTATCATTCTTTCTTTATTCTGGTCAAGGAAAGAATGGCTCTACAATATCTGAAGTCATTTCTGAAGCGAGTGCCT CATGACCCAAATGATATCCTTTTCATGTTTGTTTTATCTTTCATCAGCATGCTGCTGCTGTTGTTTAAGCTCCCTAGAGG AAGCAAAAGGAACCTTCCTCCATCTCCACCAAAATTGCCATTCATTGGCAATTTCCATCAATTAGGAACAATTCCTTATC GCTCTTTTCAAACTCTCTCGCAAAAGTACGGTCCTTTGTTGTTGCTGCATCTGGGTCATCTTCCCCTGTTGGTGGTTTCC TCTGCAGACATGGCCAGAGAAGTGATGCAAACCCATGACACAGTTTTTTCAAGCCGACCCCACCTCACATCAACAAAAGC CTTACTCTACGGGTGCAATGACATAGGATTTGCGTCCTACGGTGATGCGTGGAGACAGAAAAGGAAACTTTGTGTGCTTG AATTACTGAGCCTTAAAAGGGTGCAGTCTTTTCAGTTTATCAGAGAAGAGGAAGTAGCAGCTTTGGTTGAGAAAATACGC AGTAATGGTACTTGCTCTGTGAACCTTAGGGAGATACTTATTGCAACCACAAACAACATAATTTGCAGGTGTGTTTTCGG AAGAAAATATGATGTTAAAGGTTGCAGTTTCGGACCGCTTGTGGCAAAGATGATGACTCAACTTTCTAATTTCAGTGTGG GGGATTTGTATCCTTTGTTGGGTTGGGTTGACGTTCTCACTGGCCAGATTAAAAAATTCAAGGCCACTTTTGAAGAATTG GATGCTTTTTTTGATAATGTAATTGCAGAGCGTAAGATGGAAAGGAGGTATTTTGAGAAGAAAAAAGACTTCCTTGATAT TCTCCTTCAACTGCAGGAAGGGGGCATGTCAGAGTTTGAGCTCACCCAAGATGACTTGAAGGCTCTCTTACTGGTCTTTC TTTCTATCCCTCTTTCTGTCTGTATGCAAAAAGTTTCATTGCCCAAGCACAATTTTGAGTGTTTAATTTCTATTTCCATA ATTTCAGGACATGTTTTTGGCAGGAACTGACACATCTTCAACAACATTAGAATGGGCTATGGCAGAGCTGGTGAAAAATC CAGCCACAATGAAGAAAGTCCAAGAAGAGGTAAGAAGAGTTGTGGGGAGTAAATCAAGAATTGAGGACAGTGATGTAAAT CAAATGGAGTACATGAAATGTGTCGTCAAAGAAACTCTTAGGTTGCACCCAGCAGCTCCTCTTTTGGTTCCTAGAGAAAC AATTTCTAGTGTTAAGCTCGGAGGGTATGATATTCCTAGTAAAACAATGGTATATATCAACGCATGGGCAATTCAAAGGG ACCCTGAGTTGTGGGAAAGGCCAGAAGTGTTCATACCTGAGAGATTTGAAAACAGCAAGGTTAATTTCAATGGTCAAGAC TTTCAATTTATCCCCTTTGGTTCTGGGAGAAGAAAATGCCCTGGTGTGACATTTGGGCTTGCTTCCACCGAGTACCAGCT TGCTAATCTTTTATGTTGGTTTGATTGGAAGTTACCTACAAGTGTTCAAGATCTAGACATGAGTGAAAAATTTGGGCTCA ATGTGAACAGAAAAGTTCCTCTCTATCTCGAACCAATACCATACAACAGTATCTGAACATTAGTGTTGATCCTCTACTGT TGTGTTTTGTTTTTGTAATAAATGTCTAGTAGACAAAAGTGTGGTGTTTCATGCAAATAAAAGAAAGTGTAAGAATAAGT AATTGGGACAATGGTGAGGTGATCGTAGGTGGTTGACATTTACTCTGCCGGCCCAAGCATTGGATAAATAAGTTTTTAAT AGATGGTCCAGATAGTTCACTTGTAACCTAGTGATGACTGGCTATATAAAAGTCATAATTTCGTCCTTTCATTTTCACTA TTTTCAAATGTTGCATTAGGCATTCGTCCTTTAATTTTCTTGAATTTGAAATGTTTCATTTCGTGGTTCAACAAGAATAA TCCGCCGAGAATTTCCCCGTTCTTCAACTCCGATGCGATTTTATCCCCATAGCGAATGACTACTATATGACAAC
CDS sequence (LotjaGi1g1v0235900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCTCACACCACTATCATTCTTTCTTTATTCTGGTCAAGGAAAGAATGGCTCTACAATATCTGAAGTCATTTCTGAA GCGAGTGCCTCATGACCCAAATGATATCCTTTTCATGTTTGTTTTATCTTTCATCAGCATGCTGCTGCTGTTGTTTAAGC TCCCTAGAGGAAGCAAAAGGAACCTTCCTCCATCTCCACCAAAATTGCCATTCATTGGCAATTTCCATCAATTAGGAACA ATTCCTTATCGCTCTTTTCAAACTCTCTCGCAAAAGTACGGTCCTTTGTTGTTGCTGCATCTGGGTCATCTTCCCCTGTT GGTGGTTTCCTCTGCAGACATGGCCAGAGAAGTGATGCAAACCCATGACACAGTTTTTTCAAGCCGACCCCACCTCACAT CAACAAAAGCCTTACTCTACGGGTGCAATGACATAGGATTTGCGTCCTACGGTGATGCGTGGAGACAGAAAAGGAAACTT TGTGTGCTTGAATTACTGAGCCTTAAAAGGGTGCAGTCTTTTCAGTTTATCAGAGAAGAGGAAGTAGCAGCTTTGGTTGA GAAAATACGCAGTAATGGTACTTGCTCTGTGAACCTTAGGGAGATACTTATTGCAACCACAAACAACATAATTTGCAGGT GTGTTTTCGGAAGAAAATATGATGTTAAAGGTTGCAGTTTCGGACCGCTTGTGGCAAAGATGATGACTCAACTTTCTAAT TTCAGTGTGGGGGATTTGTATCCTTTGTTGGGTTGGGTTGACGTTCTCACTGGCCAGATTAAAAAATTCAAGGCCACTTT TGAAGAATTGGATGCTTTTTTTGATAATGTAATTGCAGAGCGTAAGATGGAAAGGAGGTATTTTGAGAAGAAAAAAGACT TCCTTGATATTCTCCTTCAACTGCAGGAAGGGGGCATGTCAGAGTTTGAGCTCACCCAAGATGACTTGAAGGCTCTCTTA CTGGACATGTTTTTGGCAGGAACTGACACATCTTCAACAACATTAGAATGGGCTATGGCAGAGCTGGTGAAAAATCCAGC CACAATGAAGAAAGTCCAAGAAGAGGTAAGAAGAGTTGTGGGGAGTAAATCAAGAATTGAGGACAGTGATGTAAATCAAA TGGAGTACATGAAATGTGTCGTCAAAGAAACTCTTAGGTTGCACCCAGCAGCTCCTCTTTTGGTTCCTAGAGAAACAATT TCTAGTGTTAAGCTCGGAGGGTATGATATTCCTAGTAAAACAATGGTATATATCAACGCATGGGCAATTCAAAGGGACCC TGAGTTGTGGGAAAGGCCAGAAGTGTTCATACCTGAGAGATTTGAAAACAGCAAGGTTAATTTCAATGGTCAAGACTTTC AATTTATCCCCTTTGGTTCTGGGAGAAGAAAATGCCCTGGTGTGACATTTGGGCTTGCTTCCACCGAGTACCAGCTTGCT AATCTTTTATGTTGGTTTGATTGGAAGTTACCTACAAGTGTTCAAGATCTAGACATGAGTGAAAAATTTGGGCTCAATGT GAACAGAAAAGTTCCTCTCTATCTCGAACCAATACCATACAACAGTATCTGA
Protein sequence (LotjaGi1g1v0235900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSHHYHSFFILVKERMALQYLKSFLKRVPHDPNDILFMFVLSFISMLLLLFKLPRGSKRNLPPSPPKLPFIGNFHQLGT IPYRSFQTLSQKYGPLLLLHLGHLPLLVVSSADMAREVMQTHDTVFSSRPHLTSTKALLYGCNDIGFASYGDAWRQKRKL CVLELLSLKRVQSFQFIREEEVAALVEKIRSNGTCSVNLREILIATTNNIICRCVFGRKYDVKGCSFGPLVAKMMTQLSN FSVGDLYPLLGWVDVLTGQIKKFKATFEELDAFFDNVIAERKMERRYFEKKKDFLDILLQLQEGGMSEFELTQDDLKALL LDMFLAGTDTSSTTLEWAMAELVKNPATMKKVQEEVRRVVGSKSRIEDSDVNQMEYMKCVVKETLRLHPAAPLLVPRETI SSVKLGGYDIPSKTMVYINAWAIQRDPELWERPEVFIPERFENSKVNFNGQDFQFIPFGSGRRKCPGVTFGLASTEYQLA NLLCWFDWKLPTSVQDLDMSEKFGLNVNRKVPLYLEPIPYNSI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 35 | 35 | - | – | |
| TMHMM | 35 | 52 | 18 | - | – | |
| Phobius | 36 | 54 | 19 | - | – | |
| PANTHER | 38 | 507 | 470 | 1.5E-93 | – | |
| Gene3D | 50 | 516 | 467 | 2.8E-137 | ||
| Phobius | 55 | 523 | 469 | - | – | |
| SUPERFAMILY | 63 | 518 | 456 | 8.38E-129 | ||
| Pfam | 63 | 505 | 443 | 3.2E-109 | ||
| PRINTS | 90 | 109 | 20 | 2.7E-53 | ||
| TMHMM | 93 | 112 | 20 | - | – | |
| PRINTS | 114 | 135 | 22 | 2.7E-53 | ||
| PRINTS | 206 | 224 | 19 | 2.7E-53 | ||
| PRINTS | 315 | 332 | 18 | 2.7E-53 | ||
| PRINTS | 326 | 343 | 18 | 2.3E-12 | ||
| PRINTS | 335 | 361 | 27 | 2.7E-53 | ||
| PRINTS | 378 | 396 | 19 | 2.7E-53 | ||
| PRINTS | 379 | 390 | 12 | 2.3E-12 | ||
| PRINTS | 419 | 443 | 25 | 2.7E-53 | ||
| PRINTS | 455 | 465 | 11 | 2.7E-53 | ||
| PRINTS | 456 | 465 | 10 | 2.3E-12 | ||
| ProSitePatterns | 458 | 467 | 10 | - | ||
| PRINTS | 465 | 488 | 24 | 2.7E-53 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Iron ion binding | Interacting selectively and non-covalently with iron (Fe) ions. | ||
| Molecular function | Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0235900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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